RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 ZSWIM1Q9BR11 485 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 LRRC1Q9BTT6 524 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 EIF2AQ9BY44 585 aaKnown RBP10.84□□□□□ -0.67
SNF8-214ENST00000515174 MIS12Q9H081 205 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 EPC1Q9H2F5 836 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 RBM12Q9NTZ6 932 aaKnown RBP10.84□□□□□ -0.67
SNF8-214ENST00000515174 ZNF446Q9NWS9 450 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 GDAP2Q9NXN4 497 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 OGFRQ9NZT2 677 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 OGDHLQ9ULD0 1010 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 STRIP2Q9ULQ0 834 aa10.84□□□□□ -0.67
SNF8-214ENST00000515174 PACSIN2Q9UNF0 486 aaPredicted RBP10.84□□□□□ -0.67
SNF8-214ENST00000515174 COL6A3P12111 3177 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 TMEM191CA6NGB0 347 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 ZNF623O75123 536 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 RECQL4O94761 1208 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 FGFR4P22455 802 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 PAX3P23760 479 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 LRPAP1P30533 357 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 GABRB2P47870 512 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 RWDD2BP57060 319 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 C2orf54Q08AI8 447 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 MGAT3Q09327 533 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 TMEM62Q0P6H9 643 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 ZNF268Q14587 947 aaPredicted RBP10.83□□□□□ -0.68
SNF8-214ENST00000515174 MESDQ14696 234 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 LONRF2Q1L5Z9 754 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 PPP1R15BQ5SWA1 713 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 ZNF697Q5TEC3 545 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 LRRC38Q5VT99 294 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 LHX8Q68G74 356 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 GDF6Q6KF10 455 aaPredicted RBP10.83□□□□□ -0.68
SNF8-214ENST00000515174 MRPL10Q7Z7H8 261 aaKnown RBP10.83□□□□□ -0.68
SNF8-214ENST00000515174 FAM228AQ86W67 206 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 IFT20Q8IY31 132 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 C3orf20Q8ND61 904 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 CCDC26Q8TAB7 109 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 FNIP1Q8TF40 1166 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 MAIP1Q8WWC4 291 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 TFAP2BQ92481 460 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 ZMAT2Q96NC0 199 aaKnown RBP10.83□□□□□ -0.68
SNF8-214ENST00000515174 RUNDC3BQ96NL0 473 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 PSMB7Q99436 277 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 FUT8Q9BYC5 575 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 TRIM6Q9C030 488 aaPredicted RBP10.83□□□□□ -0.68
SNF8-214ENST00000515174 SENP6Q9GZR1 1112 aaPredicted RBP10.83□□□□□ -0.68
SNF8-214ENST00000515174 DNAI2Q9GZS0 605 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 SDCBP2Q9H190 292 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 GOLPH3Q9H4A6 298 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 VIPAS39Q9H9C1 493 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 GDF3Q9NR23 364 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.83□□□□□ -0.68
SNF8-214ENST00000515174 STIM2Q9P246 746 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 NXF1Q9UBU9 619 aaKnown RBP10.83□□□□□ -0.68
SNF8-214ENST00000515174 IP6K2Q9UHH9 426 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 POLIQ9UNA4 740 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 PIN4Q9Y237 131 aaKnown RBP10.83□□□□□ -0.68
SNF8-214ENST00000515174 SCN5AQ14524 2016 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 LAMA3Q16787 3333 aa10.83□□□□□ -0.68
SNF8-214ENST00000515174 SMIM28A0A1B0GU29 152 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 SIGLEC16A6NMB1 481 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 GPR182O15218 404 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 TLR3O15455 904 aaKnown RBP10.82□□□□□ -0.68
SNF8-214ENST00000515174 PSTPIP1O43586 416 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 ASGR1P07306 291 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 CFHP08603 1231 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 SETSIPP0DME0 302 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 CD58P19256 250 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 DRG2P55039 364 aaKnown RBP10.82□□□□□ -0.68
SNF8-214ENST00000515174 PTK7Q13308 1070 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 NNTQ13423 1086 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 ACAP1Q15027 740 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 KCNA10Q16322 511 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 CYP1B1Q16678 543 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 LRRC26Q2I0M4 334 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 DCAF12L1Q5VU92 463 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 C9orf57Q5W0N0 161 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 FAM109BQ6ICB4 259 aaPredicted RBP10.82□□□□□ -0.68
SNF8-214ENST00000515174 C8orf74Q6P047 294 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 LCLAT1Q6UWP7 414 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 HDXQ7Z353 690 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 MAATS1Q7Z4T9 603 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 RNF180Q86T96 592 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 ERICH1Q86X53 443 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 HACE1Q8IYU2 909 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 CRYBG2Q8N1P7 616 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 NIPA2Q8N8Q9 360 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 SMG8Q8ND04 991 aaKnown RBP10.82□□□□□ -0.68
SNF8-214ENST00000515174 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.82□□□□□ -0.68
SNF8-214ENST00000515174 STK32AQ8WU08 396 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 SEC14L1Q92503 715 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 ALG3Q92685 438 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 RNPC3Q96LT9 517 aaKnown RBP10.82□□□□□ -0.68
SNF8-214ENST00000515174 GUCD1Q96NT3 240 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 NT5C1AQ9BXI3 368 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 ELOVL4Q9GZR5 314 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 PRKAG2Q9UGJ0 569 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 DMGDHQ9UI17 866 aaKnown RBP10.82□□□□□ -0.68
SNF8-214ENST00000515174 ANAPC7Q9UJX3 599 aa10.82□□□□□ -0.68
SNF8-214ENST00000515174 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms