RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 NDUFB5O43674 189 aa15.06■□□□□ 0
TRIO-222ENST00000515144 DSG3P32926 999 aa15.06■□□□□ 0
TRIO-222ENST00000515144 PPP4CP60510 307 aa15.06■□□□□ 0
TRIO-222ENST00000515144 ADCY2Q08462 1091 aa15.06■□□□□ 0
TRIO-222ENST00000515144 PCNX4Q63HM2 1172 aa15.06■□□□□ 0
TRIO-222ENST00000515144 C1orf131Q8NDD1 294 aaKnown RBP15.06■□□□□ 0
TRIO-222ENST00000515144 CSGALNACT1Q8TDX6 532 aa15.06■□□□□ 0
TRIO-222ENST00000515144 PITPNM3Q9BZ71 974 aa15.06■□□□□ 0
TRIO-222ENST00000515144 KRT38O76015 456 aa15.06■□□□□ 0
TRIO-222ENST00000515144 HIST1H2AGP0C0S8 130 aaPredicted RBP15.06■□□□□ 0
TRIO-222ENST00000515144 HIST1H2ADP20671 130 aa15.06■□□□□ 0
TRIO-222ENST00000515144 MZF1P28698 734 aaPredicted RBP15.06■□□□□ 0
TRIO-222ENST00000515144 GYS2P54840 703 aa15.06■□□□□ 0
TRIO-222ENST00000515144 ANKS3Q6ZW76 656 aa15.06■□□□□ 0
TRIO-222ENST00000515144 ATP6V0D2Q8N8Y2 350 aa15.06■□□□□ 0
TRIO-222ENST00000515144 HIST1H2AHQ96KK5 128 aa15.06■□□□□ 0
TRIO-222ENST00000515144 RIT2Q99578 217 aa15.06■□□□□ 0
TRIO-222ENST00000515144 HIST1H2AJQ99878 128 aa15.06■□□□□ 0
TRIO-222ENST00000515144 H2AFJQ9BTM1 129 aa15.06■□□□□ 0
TRIO-222ENST00000515144 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.06■□□□□ 0
TRIO-222ENST00000515144 MMEP08473 750 aa15.06■□□□□ 0
TRIO-222ENST00000515144 SLURP2P0DP57 97 aa15.06■□□□□ 0
TRIO-222ENST00000515144 UCHL3P15374 230 aa15.06■□□□□ 0
TRIO-222ENST00000515144 ELNP15502 786 aa15.06■□□□□ 0
TRIO-222ENST00000515144 PMS2P54278 862 aa15.06■□□□□ 0
TRIO-222ENST00000515144 TFAP2DQ7Z6R9 452 aa15.06■□□□□ 0
TRIO-222ENST00000515144 SYT2Q8N9I0 419 aaPredicted RBP15.06■□□□□ 0
TRIO-222ENST00000515144 VMP1Q96GC9 406 aa15.06■□□□□ 0
TRIO-222ENST00000515144 PLA2G4CQ9UP65 541 aa15.06■□□□□ 0
TRIO-222ENST00000515144 RFX5P48382 616 aaPredicted RBP15.06■□□□□ 0
TRIO-222ENST00000515144 PHLDB3Q6NSJ2 640 aa15.06■□□□□ 0
TRIO-222ENST00000515144 RGL4Q8IZJ4 473 aa15.06■□□□□ 0
TRIO-222ENST00000515144 GBP5Q96PP8 586 aa15.06■□□□□ 0
TRIO-222ENST00000515144 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.06■□□□□ 0
TRIO-222ENST00000515144 DDX43Q9NXZ2 648 aaKnown RBP15.06■□□□□ 0
TRIO-222ENST00000515144 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.06■□□□□ 0
TRIO-222ENST00000515144 NR2E3Q9Y5X4 410 aa15.06■□□□□ 0
TRIO-222ENST00000515144 AKR1A1P14550 325 aa15.05■□□□□ 0
TRIO-222ENST00000515144 EFTUD2Q15029 972 aaKnown RBP eCLIP15.05■□□□□ 04e-6■■■■□ 21.4
TRIO-222ENST00000515144 CCSER1Q9C0I3 900 aa15.05■□□□□ 0
TRIO-222ENST00000515144 NEUROG2Q9H2A3 272 aa15.05■□□□□ 0
TRIO-222ENST00000515144 NMRK2Q9NPI5 230 aa15.05■□□□□ 0
TRIO-222ENST00000515144 KPNA7A9QM74 516 aa15.05■□□□□ 0
TRIO-222ENST00000515144 IFNA8P32881 189 aa15.05■□□□□ 0
TRIO-222ENST00000515144 DPYDQ12882 1025 aa15.05■□□□□ 0
TRIO-222ENST00000515144 CUL1Q13616 776 aa15.05■□□□□ 0
TRIO-222ENST00000515144 MORF4L2Q15014 288 aa15.05■□□□□ 0
TRIO-222ENST00000515144 FAXCQ5TGI0 409 aa15.05■□□□□ 0
TRIO-222ENST00000515144 RNPC3Q96LT9 517 aaKnown RBP15.05■□□□□ 0
TRIO-222ENST00000515144 ABCB6Q9NP58 842 aa15.05■□□□□ 0
TRIO-222ENST00000515144 MID2Q9UJV3 735 aa15.05■□□□□ 0
TRIO-222ENST00000515144 PDE4DIPQ5VU43 2346 aa15.05■□□□□ 0
TRIO-222ENST00000515144 REREQ9P2R6 1566 aa15.05■□□□□ 0
TRIO-222ENST00000515144 SLC12A8A0AV02 714 aa15.05■□□□□ -0
TRIO-222ENST00000515144 NCF1BA6NI72 391 aaPredicted RBP15.05■□□□□ -0
TRIO-222ENST00000515144 NCF1CA8MVU1 366 aaPredicted RBP15.05■□□□□ -0
TRIO-222ENST00000515144 NCF1P14598 390 aaPredicted RBP15.05■□□□□ -0
TRIO-222ENST00000515144 ACADSBP45954 432 aa15.05■□□□□ -0
TRIO-222ENST00000515144 FAM83AQ86UY5 434 aa15.05■□□□□ -0
TRIO-222ENST00000515144 TAGAPQ8N103 731 aa15.05■□□□□ -0
TRIO-222ENST00000515144 NLGN2Q8NFZ4 835 aa15.05■□□□□ -0
TRIO-222ENST00000515144 ANKEF1Q9NU02 776 aa15.05■□□□□ -0
TRIO-222ENST00000515144 APOBEC2Q9Y235 224 aaKnown RBP15.05■□□□□ -0
TRIO-222ENST00000515144 ATP1A1P05023 1023 aaKnown RBP15.05■□□□□ -0
TRIO-222ENST00000515144 C16orf59Q7L2K0 433 aa15.05■□□□□ -0
TRIO-222ENST00000515144 DIS3Q9Y2L1 958 aaKnown RBP15.05■□□□□ -0
TRIO-222ENST00000515144 HOXA7P31268 230 aaPredicted RBP15.05■□□□□ -0
TRIO-222ENST00000515144 CTNNB1P35222 781 aa15.05■□□□□ -0
TRIO-222ENST00000515144 BEND6Q5SZJ8 279 aaPredicted RBP15.05■□□□□ -0
TRIO-222ENST00000515144 MPZL3Q6UWV2 235 aa15.05■□□□□ -0
TRIO-222ENST00000515144 WHAMMQ8TF30 809 aa15.05■□□□□ -0
TRIO-222ENST00000515144 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.05■□□□□ -07e-7■■□□□ 14.3
TRIO-222ENST00000515144 Q9H521 79 aa15.05■□□□□ -0
TRIO-222ENST00000515144 PNMA8BQ9ULN7 279 aaPredicted RBP15.05■□□□□ -0
TRIO-222ENST00000515144 NR1D1P20393 614 aa15.05■□□□□ -0
TRIO-222ENST00000515144 SOAT1P35610 550 aa15.05■□□□□ -0
TRIO-222ENST00000515144 NAMPTP43490 491 aa15.05■□□□□ -0
TRIO-222ENST00000515144 NPTX2P47972 431 aa15.05■□□□□ -0
TRIO-222ENST00000515144 MAGOHP61326 146 aaKnown RBP15.05■□□□□ -0
TRIO-222ENST00000515144 NUDCD3Q8IVD9 361 aa15.05■□□□□ -0
TRIO-222ENST00000515144 COPS5Q92905 334 aa15.05■□□□□ -0
TRIO-222ENST00000515144 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.05■□□□□ -0
TRIO-222ENST00000515144 MIF4GDA9UHW6 222 aaKnown RBP15.04■□□□□ -0
TRIO-222ENST00000515144 PDCLQ13371 301 aa15.04■□□□□ -0
TRIO-222ENST00000515144 KCNT1Q5JUK3 1230 aa15.04■□□□□ -0
TRIO-222ENST00000515144 IFNLR1Q8IU57 520 aaPredicted RBP15.04■□□□□ -0
TRIO-222ENST00000515144 PCDHGB4Q9UN71 923 aa15.04■□□□□ -0
TRIO-222ENST00000515144 TRAF3IP3Q9Y228 551 aa15.04■□□□□ -0
TRIO-222ENST00000515144 A0A087WUV0 522 aaPredicted RBP15.04■□□□□ -0
TRIO-222ENST00000515144 FKTNO75072 461 aa15.04■□□□□ -0
TRIO-222ENST00000515144 PSEN2P49810 448 aa15.04■□□□□ -0
TRIO-222ENST00000515144 PRKCQQ04759 706 aa15.04■□□□□ -0
TRIO-222ENST00000515144 TRIM55Q9BYV6 548 aa15.04■□□□□ -0
TRIO-222ENST00000515144 KDM4CQ9H3R0 1056 aa15.04■□□□□ -0
TRIO-222ENST00000515144 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.04■□□□□ -06e-6■■■□□ 18
TRIO-222ENST00000515144 NPM3O75607 178 aaKnown RBP15.04■□□□□ -0
TRIO-222ENST00000515144 ALDH1A2O94788 518 aa15.04■□□□□ -0
TRIO-222ENST00000515144 TPGS1Q6ZTW0 290 aa15.04■□□□□ -0
TRIO-222ENST00000515144 RCOR2Q8IZ40 523 aa15.04■□□□□ -0
TRIO-222ENST00000515144 RFFLQ8WZ73 363 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms