RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 DYDC2Q96IM9 177 aa12.94□□□□□ -0.34
SMAD5-210ENST00000515005 TCEANC2Q96MN5 208 aa12.94□□□□□ -0.34
SMAD5-210ENST00000515005 LPIN3Q9BQK8 851 aa12.94□□□□□ -0.34
SMAD5-210ENST00000515005 ADPGKQ9BRR6 497 aa12.94□□□□□ -0.34
SMAD5-210ENST00000515005 ZSWIM4Q9H7M6 989 aa12.94□□□□□ -0.34
SMAD5-210ENST00000515005 CABIN1Q9Y6J0 2220 aa12.94□□□□□ -0.34
SMAD5-210ENST00000515005 TSC2P49815 1807 aa12.94□□□□□ -0.34
SMAD5-210ENST00000515005 SGSM2O43147 1006 aa12.93□□□□□ -0.34
SMAD5-210ENST00000515005 AP5Z1O43299 807 aa12.93□□□□□ -0.34
SMAD5-210ENST00000515005 TLX3O43711 291 aaPredicted RBP12.93□□□□□ -0.34
SMAD5-210ENST00000515005 MARCH6O60337 910 aa12.93□□□□□ -0.34
SMAD5-210ENST00000515005 DGAT1O75907 488 aa12.93□□□□□ -0.34
SMAD5-210ENST00000515005 NTRK1P04629 796 aa12.93□□□□□ -0.34
SMAD5-210ENST00000515005 MCM4P33991 863 aa12.93□□□□□ -0.34
SMAD5-210ENST00000515005 RPL6Q02878 288 aaKnown RBP12.93□□□□□ -0.34
SMAD5-210ENST00000515005 ZNF33AQ06730 810 aa12.93□□□□□ -0.34
SMAD5-210ENST00000515005 BFSP1Q12934 665 aa12.93□□□□□ -0.34
SMAD5-210ENST00000515005 EPHA7Q15375 998 aa12.93□□□□□ -0.34
SMAD5-210ENST00000515005 CDCA2Q69YH5 1023 aaPredicted RBP12.93□□□□□ -0.34
SMAD5-210ENST00000515005 CENPPQ6IPU0 288 aa12.93□□□□□ -0.34
SMAD5-210ENST00000515005 LRRC69Q6ZNQ3 347 aa12.93□□□□□ -0.34
SMAD5-210ENST00000515005 KRT25Q7Z3Z0 450 aa12.93□□□□□ -0.34
SMAD5-210ENST00000515005 RABEPKQ7Z6M1 372 aa12.93□□□□□ -0.34
SMAD5-210ENST00000515005 SMC5Q8IY18 1101 aa12.93□□□□□ -0.34
SMAD5-210ENST00000515005 GALNT15Q8N3T1 639 aa12.93□□□□□ -0.34
SMAD5-210ENST00000515005 MAB21L3Q8N8X9 362 aa12.93□□□□□ -0.34
SMAD5-210ENST00000515005 APPL2Q8NEU8 664 aa12.93□□□□□ -0.34
SMAD5-210ENST00000515005 CCDC26Q8TAB7 109 aa12.93□□□□□ -0.34
SMAD5-210ENST00000515005 SETD7Q8WTS6 366 aaKnown RBP12.93□□□□□ -0.34
SMAD5-210ENST00000515005 HMGB4Q8WW32 186 aa12.93□□□□□ -0.34
SMAD5-210ENST00000515005 ZMAT2Q96NC0 199 aaKnown RBP12.93□□□□□ -0.34
SMAD5-210ENST00000515005 PNMA5Q96PV4 448 aa12.93□□□□□ -0.34
SMAD5-210ENST00000515005 SEMA4CQ9C0C4 833 aa12.93□□□□□ -0.34
SMAD5-210ENST00000515005 GPRC5CQ9NQ84 441 aa12.93□□□□□ -0.34
SMAD5-210ENST00000515005 BCCIPQ9P287 314 aaKnown RBP eCLIP12.93□□□□□ -0.34
SMAD5-210ENST00000515005 DDX25Q9UHL0 483 aaKnown RBP12.93□□□□□ -0.34
SMAD5-210ENST00000515005 GOLGA8CPA6NN73 597 aa12.92□□□□□ -0.34
SMAD5-210ENST00000515005 B8ZZF3 427 aa12.92□□□□□ -0.34
SMAD5-210ENST00000515005 LIG1P18858 919 aa12.92□□□□□ -0.34
SMAD5-210ENST00000515005 CDC25CP30307 473 aa12.92□□□□□ -0.34
SMAD5-210ENST00000515005 AVPR1AP37288 418 aa12.92□□□□□ -0.34
SMAD5-210ENST00000515005 PLEKHG6Q3KR16 790 aa12.92□□□□□ -0.34
SMAD5-210ENST00000515005 TAF1BQ53T94 588 aaPredicted RBP12.92□□□□□ -0.34
SMAD5-210ENST00000515005 MAEAQ7L5Y9 396 aa12.92□□□□□ -0.34
SMAD5-210ENST00000515005 ITIH5Q86UX2 942 aa12.92□□□□□ -0.34
SMAD5-210ENST00000515005 TPH2Q8IWU9 490 aa12.92□□□□□ -0.34
SMAD5-210ENST00000515005 ALLCQ8N6M5 410 aa12.92□□□□□ -0.34
SMAD5-210ENST00000515005 PRDM16Q9HAZ2 1276 aa12.92□□□□□ -0.34
SMAD5-210ENST00000515005 TDP1Q9NUW8 608 aa12.92□□□□□ -0.34
SMAD5-210ENST00000515005 VPS54Q9P1Q0 977 aa12.92□□□□□ -0.34
SMAD5-210ENST00000515005 PCDHB8Q9UN66 801 aa12.92□□□□□ -0.34
SMAD5-210ENST00000515005 TIMM13Q9Y5L4 95 aaPredicted RBP12.92□□□□□ -0.34
SMAD5-210ENST00000515005 NOTCH2Q04721 2471 aa12.91□□□□□ -0.34
SMAD5-210ENST00000515005 OBSL1O75147 1896 aa12.91□□□□□ -0.34
SMAD5-210ENST00000515005 MTMR11A4FU01 709 aa12.91□□□□□ -0.34
SMAD5-210ENST00000515005 SGK1O00141 431 aa12.91□□□□□ -0.34
SMAD5-210ENST00000515005 SLC27A2O14975 620 aa12.91□□□□□ -0.34
SMAD5-210ENST00000515005 PRPF3O43395 683 aaKnown RBP12.91□□□□□ -0.34
SMAD5-210ENST00000515005 OAZ2O95190 189 aa12.91□□□□□ -0.34
SMAD5-210ENST00000515005 GSPT1P15170 499 aaKnown RBP12.91□□□□□ -0.34
SMAD5-210ENST00000515005 MARCKSP29966 332 aaPredicted RBP12.91□□□□□ -0.34
SMAD5-210ENST00000515005 NMT1P30419 496 aaKnown RBP12.91□□□□□ -0.34
SMAD5-210ENST00000515005 NUCB1Q02818 461 aa12.91□□□□□ -0.34
SMAD5-210ENST00000515005 YWHAHQ04917 246 aaPredicted RBP12.91□□□□□ -0.34
SMAD5-210ENST00000515005 GPR17Q13304 367 aa12.91□□□□□ -0.34
SMAD5-210ENST00000515005 BYSLQ13895 437 aaKnown RBP12.91□□□□□ -0.34
SMAD5-210ENST00000515005 DCAF4L1Q3SXM0 396 aa12.91□□□□□ -0.34
SMAD5-210ENST00000515005 XKR4Q5GH76 650 aa12.91□□□□□ -0.34
SMAD5-210ENST00000515005 ALKAL1Q6UXT8 129 aa12.91□□□□□ -0.34
SMAD5-210ENST00000515005 TMEM150AQ86TG1 271 aa12.91□□□□□ -0.34
SMAD5-210ENST00000515005 FMNL3Q8IVF7 1028 aa12.91□□□□□ -0.34
SMAD5-210ENST00000515005 SLC41A1Q8IVJ1 513 aa12.91□□□□□ -0.34
SMAD5-210ENST00000515005 SFTPA1Q8IWL2 248 aa12.91□□□□□ -0.34
SMAD5-210ENST00000515005 ZBTB8OSQ8IWT0 167 aa12.91□□□□□ -0.34
SMAD5-210ENST00000515005 PGBD3Q8N328 593 aa12.91□□□□□ -0.34
SMAD5-210ENST00000515005 TXNDC5Q8NBS9 432 aaKnown RBP12.91□□□□□ -0.34
SMAD5-210ENST00000515005 BAHD1Q8TBE0 780 aaPredicted RBP12.91□□□□□ -0.34
SMAD5-210ENST00000515005 C18orf25Q96B23 403 aaPredicted RBP12.91□□□□□ -0.34
SMAD5-210ENST00000515005 GCNAQ96QF7 691 aa12.91□□□□□ -0.34
SMAD5-210ENST00000515005 KIF2CQ99661 725 aa12.91□□□□□ -0.34
SMAD5-210ENST00000515005 ARID3AQ99856 593 aa12.91□□□□□ -0.34
SMAD5-210ENST00000515005 SLC38A7Q9NVC3 462 aa12.91□□□□□ -0.34
SMAD5-210ENST00000515005 DUS2Q9NX74 493 aaKnown RBP12.91□□□□□ -0.34
SMAD5-210ENST00000515005 CITO14578 2027 aa12.91□□□□□ -0.34
SMAD5-210ENST00000515005 A0A087WWV3 80 aa12.9□□□□□ -0.34
SMAD5-210ENST00000515005 KLF18A0A0U1RQI7 1052 aa12.9□□□□□ -0.34
SMAD5-210ENST00000515005 A0A1W2PQD8 194 aa12.9□□□□□ -0.34
SMAD5-210ENST00000515005 PLK4O00444 970 aa12.9□□□□□ -0.34
SMAD5-210ENST00000515005 ACKR2O00590 384 aa12.9□□□□□ -0.34
SMAD5-210ENST00000515005 SLITRK3O94933 977 aa12.9□□□□□ -0.34
SMAD5-210ENST00000515005 KLF8O95600 359 aaPredicted RBP12.9□□□□□ -0.34
SMAD5-210ENST00000515005 CHRM1P11229 460 aaPredicted RBP12.9□□□□□ -0.34
SMAD5-210ENST00000515005 HLA-EP13747 358 aa12.9□□□□□ -0.34
SMAD5-210ENST00000515005 RPL9P32969 192 aaKnown RBP12.9□□□□□ -0.34
SMAD5-210ENST00000515005 OPRD1P41143 372 aa12.9□□□□□ -0.34
SMAD5-210ENST00000515005 CDR1P51861 262 aa12.9□□□□□ -0.34
SMAD5-210ENST00000515005 GRIK2Q13002 908 aa12.9□□□□□ -0.34
SMAD5-210ENST00000515005 MTF1Q14872 753 aa12.9□□□□□ -0.34
SMAD5-210ENST00000515005 COLEC12Q5KU26 742 aa12.9□□□□□ -0.34
SMAD5-210ENST00000515005 NCAPH2Q6IBW4 605 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms