RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 KIAA1217Q5T5P2 1943 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 DOCK1Q14185 1865 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 FAM47E-STBD1D6RA91 191 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 ASMTLO95671 621 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 CFBP00751 764 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 GZMAP12544 262 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 KCNA3P22001 575 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 BPIFB3P59826 476 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 EPHA7Q15375 998 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 TAF12Q16514 161 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 MYLK3Q32MK0 819 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 ZNF772Q68DY9 489 aaPredicted RBP7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 CORO6Q6QEF8 472 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 ZNF600Q6ZNG1 722 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 C3orf62Q6ZUJ4 267 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 GATAD2AQ86YP4 633 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 CLVS1Q8IUQ0 354 aaPredicted RBP7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 MMGT1Q8N4V1 131 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 PIGOQ8TEQ8 1089 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 HERVK_113Q902F9 699 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 ARHGEF2Q92974 986 aaKnown RBP7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 SLC35C1Q96A29 364 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 DYDC2Q96IM9 177 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 HEPHQ9BQS7 1158 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 HGH1Q9BTY7 390 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 PACSIN1Q9BY11 444 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 PFDN2Q9UHV9 154 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 PHIPQ8WWQ0 1821 aa7.87□□□□□ -1.15
PDLIM5-219ENST00000514743 LOC285556D6RIA3 1793 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 FRMPD4Q14CM0 1322 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 H0YC42 278 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 FBP2O00757 339 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 BUB1O43683 1085 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 PLA2G6O60733 806 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 RAD17O75943 681 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 KLRC1P26715 233 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 PON1P27169 355 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 RXRGP48443 463 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 TPD52P55327 224 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 JAM2P57087 298 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 TSPY1Q01534 308 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 SND1Q7KZF4 910 aaKnown RBP eCLIP7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 GALNT7Q86SF2 657 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 ZNF598Q86UK7 904 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 SLC38A6Q8IZM9 456 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 LSMEM1Q8N8F7 131 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 STKLD1Q8NE28 680 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 NCSTNQ92542 709 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 MS4A4AQ96JQ5 239 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 TMEM39BQ9GZU3 492 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 CRISPLD2Q9H0B8 497 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 TUFT1Q9NNX1 390 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 C8orf4Q9NR00 106 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 FAM114A2Q9NRY5 505 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 PCDHGB3Q9Y5G1 929 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 MATN2O00339 956 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 SLC16A3O15427 465 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 NR3C1P04150 777 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 THOP1P52888 689 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 RNASE9P60153 205 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 PPP2R2AP63151 447 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 GUCY1A3Q02108 690 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 ARID5AQ03989 594 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 RAPGEF1Q13905 1077 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 SIM2Q14190 667 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 PTPROQ16827 1216 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 TDRD12Q587J7 1177 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 LRRC8BQ6P9F7 803 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 TRIM67Q6ZTA4 783 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 MIGA2Q7L4E1 593 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 USP38Q8NB14 1042 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 BCL7CQ8WUZ0 217 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 DHX38Q92620 1227 aaKnown RBP7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 ZBED3Q96IU2 234 aaPredicted RBP7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 CAMKK2Q96RR4 588 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 KLHL4Q9C0H6 718 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 DEFB129Q9H1M3 183 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 FBXO28Q9NVF7 368 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 CFL2Q9Y281 166 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 HYOU1Q9Y4L1 999 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 TELO2Q9Y4R8 837 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 LCTP09848 1927 aa7.86□□□□□ -1.15
PDLIM5-219ENST00000514743 GTPBP10A4D1E9 387 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-219ENST00000514743 ANKRD34BA5PLL1 514 aa7.85□□□□□ -1.15
PDLIM5-219ENST00000514743 CFAP73A6NFT4 308 aa7.85□□□□□ -1.15
PDLIM5-219ENST00000514743 PCP4L1A6NKN8 68 aa7.85□□□□□ -1.15
PDLIM5-219ENST00000514743 AGPSO00116 658 aa7.85□□□□□ -1.15
PDLIM5-219ENST00000514743 KLHL41O60662 606 aa7.85□□□□□ -1.15
PDLIM5-219ENST00000514743 KPNA6O60684 536 aa7.85□□□□□ -1.15
PDLIM5-219ENST00000514743 AFPP02771 609 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-219ENST00000514743 ENO2P09104 434 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-219ENST00000514743 ARP10275 920 aa7.85□□□□□ -1.15
PDLIM5-219ENST00000514743 UCHL3P15374 230 aa7.85□□□□□ -1.15
PDLIM5-219ENST00000514743 NMT1P30419 496 aaKnown RBP7.85□□□□□ -1.15
PDLIM5-219ENST00000514743 HPDP32754 393 aaPredicted RBP7.85□□□□□ -1.15
PDLIM5-219ENST00000514743 CCNG1P51959 295 aa7.85□□□□□ -1.15
PDLIM5-219ENST00000514743 MAP3K10Q02779 954 aa7.85□□□□□ -1.15
PDLIM5-219ENST00000514743 SEPT6Q14141 434 aa7.85□□□□□ -1.15
PDLIM5-219ENST00000514743 NAB2Q15742 525 aa7.85□□□□□ -1.15
PDLIM5-219ENST00000514743 NFIL3Q16649 462 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms