RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 EMC10Q5UCC4 262 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 SLC27A1Q6PCB7 646 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 ATG14Q6ZNE5 492 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 NIPA1Q7RTP0 329 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 NOSTRINQ8IVI9 506 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 TTC9BQ8N6N2 239 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 MAB21L3Q8N8X9 362 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 SNIP1Q8TAD8 396 aaKnown RBP3.58□□□□□ -1.84
CHD1-211ENST00000514344 TTC9Q92623 222 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 TMEM176AQ96HP8 235 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 CEP170P1Q96L14 293 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 TBC1D32Q96NH3 1257 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 SLC46A2Q9BY10 475 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 LRRC3Q9BY71 257 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 DCTPP1Q9H773 170 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 RIC8AQ9NPQ8 531 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 CD93Q9NPY3 652 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 USP20Q9Y2K6 914 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 MTORP42345 2549 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 MYLKQ15746 1914 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 BLACEA4D250 179 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 K7EQS6 105 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 CBX4O00257 560 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 ADAMTS3O15072 1205 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 KLK10O43240 276 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 DKK1O94907 266 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 KLF8O95600 359 aaPredicted RBP3.58□□□□□ -1.84
CHD1-211ENST00000514344 GNSP15586 552 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 ALDH1A3P47895 512 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 NT5C2P49902 561 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 USP11P51784 963 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 EPHB3P54753 998 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 SETQ01105 290 aaPredicted RBP3.58□□□□□ -1.84
CHD1-211ENST00000514344 TLE1Q04724 770 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 MESP2Q0VG99 397 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 TMEM132AQ24JP5 1023 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 SPDYCQ5MJ68 293 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 LRCH2Q5VUJ6 765 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 TPGS2Q68CL5 300 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 NFXL1Q6ZNB6 911 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 MIER3Q7Z3K6 550 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 RABEPKQ7Z6M1 372 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 DNAJB7Q7Z6W7 309 aaPredicted RBP3.58□□□□□ -1.84
CHD1-211ENST00000514344 RALYLQ86SE5 291 aaKnown RBP3.58□□□□□ -1.84
CHD1-211ENST00000514344 FERMT3Q86UX7 667 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 ZCCHC9Q8N567 271 aaKnown RBP3.58□□□□□ -1.84
CHD1-211ENST00000514344 IL17RCQ8NAC3 791 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 BAHD1Q8TBE0 780 aaPredicted RBP3.58□□□□□ -1.84
CHD1-211ENST00000514344 WBP1Q96G27 269 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 CDC6Q99741 560 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 ECT2Q9H8V3 914 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 LRRC4CQ9HCJ2 640 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 CALCOCO1Q9P1Z2 691 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 CYP8B1Q9UNU6 501 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 NUB1Q9Y5A7 615 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 WNT6Q9Y6F9 365 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 TAF6LQ9Y6J9 622 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 KIAA1549LQ6ZVL6 1849 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 TRIP11Q15643 1979 aa3.58□□□□□ -1.84
CHD1-211ENST00000514344 KCNK3O14649 394 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 TRIM66O15016 1216 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 FLRT2O43155 660 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 STBD1O95210 358 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 AXLP30530 894 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 UPP1Q16831 310 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 HLA-BQ31612 363 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 PKDCCQ504Y2 493 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 BROXQ5VW32 411 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 CD300LGQ6UXG3 332 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 TMPRSS12Q86WS5 348 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 ERICH1Q86X53 443 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 EFCAB13Q8IY85 973 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 CMTM8Q8IZV2 173 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 USP13Q92995 863 aaPredicted RBP3.57□□□□□ -1.84
CHD1-211ENST00000514344 EXOC4Q96A65 974 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 LIN37Q96GY3 246 aaPredicted RBP3.57□□□□□ -1.84
CHD1-211ENST00000514344 JPH2Q9BR39 696 aaPredicted RBP3.57□□□□□ -1.84
CHD1-211ENST00000514344 TASP1Q9H6P5 420 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 OBP2AQ9NY56 170 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 SEPT3Q9UH03 358 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 AFF4Q9UHB7 1163 aaKnown RBP3.57□□□□□ -1.84
CHD1-211ENST00000514344 TBX20Q9UMR3 447 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 MAN2B2Q9Y2E5 1009 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 TIMM13Q9Y5L4 95 aaPredicted RBP3.57□□□□□ -1.84
CHD1-211ENST00000514344 PDZD2O15018 2839 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 ZBTB39O15060 712 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 MSH4O15457 936 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 TNFSF14O43557 240 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 LIG1P18858 919 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 SFNP31947 248 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 MATKP42679 507 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 WASP42768 502 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 JAK3P52333 1124 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 PTENP60484 403 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 IL9RQ01113 521 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 MBTD1Q05BQ5 628 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 DNAJC3Q13217 504 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 AP3B2Q13367 1082 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 AMHR2Q16671 573 aa3.57□□□□□ -1.84
CHD1-211ENST00000514344 INF2Q27J81 1249 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms