RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 ANO4Q32M45 955 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 PPP1R2P3Q6NXS1 205 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 DNAJC9Q8WXX5 260 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 WARS2Q9UGM6 360 aaKnown RBP13.68□□□□□ -0.22
PRDM16-208ENST00000514189 SUGT1Q9Y2Z0 365 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 PPME1Q9Y570 386 aa13.68□□□□□ -0.22
PRDM16-208ENST00000514189 NQO1P15559 274 aaKnown RBP13.67□□□□□ -0.22
PRDM16-208ENST00000514189 SERPINB4P48594 390 aa13.67□□□□□ -0.22
PRDM16-208ENST00000514189 DGKZQ13574 1117 aa13.67□□□□□ -0.22
PRDM16-208ENST00000514189 PCSK7Q16549 785 aa13.67□□□□□ -0.22
PRDM16-208ENST00000514189 ARL13BQ3SXY8 428 aa13.67□□□□□ -0.22
PRDM16-208ENST00000514189 HSP90AA5PQ58FG0 334 aa13.67□□□□□ -0.22
PRDM16-208ENST00000514189 PCNX4Q63HM2 1172 aa13.67□□□□□ -0.22
PRDM16-208ENST00000514189 OTOP1Q7RTM1 612 aa13.67□□□□□ -0.22
PRDM16-208ENST00000514189 LRP10Q7Z4F1 713 aa13.67□□□□□ -0.22
PRDM16-208ENST00000514189 PRPF39Q86UA1 669 aaKnown RBP13.67□□□□□ -0.22
PRDM16-208ENST00000514189 FAM129AQ9BZQ8 928 aa13.67□□□□□ -0.22
PRDM16-208ENST00000514189 WWP1Q9H0M0 922 aa13.67□□□□□ -0.22
PRDM16-208ENST00000514189 SMG5Q9UPR3 1016 aaKnown RBP13.67□□□□□ -0.22
PRDM16-208ENST00000514189 KIF1AQ12756 1690 aa13.67□□□□□ -0.22
PRDM16-208ENST00000514189 NVLO15381 856 aaKnown RBP13.67□□□□□ -0.22
PRDM16-208ENST00000514189 CCDC22O60826 627 aa13.67□□□□□ -0.22
PRDM16-208ENST00000514189 ENTPD3O75355 529 aa13.67□□□□□ -0.22
PRDM16-208ENST00000514189 SGSM1Q2NKQ1 1148 aa13.67□□□□□ -0.22
PRDM16-208ENST00000514189 EXOC8Q8IYI6 725 aa13.67□□□□□ -0.22
PRDM16-208ENST00000514189 PRPF31Q8WWY3 499 aaKnown RBP13.67□□□□□ -0.22
PRDM16-208ENST00000514189 SDCCAG3Q96C92 435 aa13.67□□□□□ -0.22
PRDM16-208ENST00000514189 SERPINI1Q99574 410 aa13.67□□□□□ -0.22
PRDM16-208ENST00000514189 GLIS2Q9BZE0 524 aaPredicted RBP13.67□□□□□ -0.22
PRDM16-208ENST00000514189 DDX56Q9NY93 547 aaKnown RBP13.67□□□□□ -0.22
PRDM16-208ENST00000514189 ZNRF3Q9ULT6 936 aa13.67□□□□□ -0.22
PRDM16-208ENST00000514189 PIN4Q9Y237 131 aaKnown RBP13.67□□□□□ -0.22
PRDM16-208ENST00000514189 ADCY3O60266 1144 aa13.67□□□□□ -0.22
PRDM16-208ENST00000514189 EFHD1Q9BUP0 239 aa13.67□□□□□ -0.22
PRDM16-208ENST00000514189 TLR2O60603 784 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 HMBSP08397 361 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 KCNA3P22001 575 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 PLIN5Q00G26 463 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 RNF148Q8N7C7 305 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 ZNF280CQ8ND82 737 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 TRAPPC12Q8WVT3 735 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 CCDC90BQ9GZT6 254 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 LRRC4BQ9NT99 713 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 XRN1Q8IZH2 1706 aaKnown RBP13.66□□□□□ -0.22
PRDM16-208ENST00000514189 GOLGA8QA0A0J9YX86 632 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 GOLGA8OA6NCC3 632 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 DCDC2CA8MYV0 355 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 ANKRD63C9JTQ0 380 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 GOLGA8NF8WBI6 632 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 WDR46O15213 610 aaKnown RBP13.66□□□□□ -0.22
PRDM16-208ENST00000514189 DYNC1LI2O43237 492 aaPredicted RBP13.66□□□□□ -0.22
PRDM16-208ENST00000514189 GLRBP48167 497 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 IREB2P48200 963 aaKnown RBP13.66□□□□□ -0.22
PRDM16-208ENST00000514189 PAN2Q504Q3 1202 aaKnown RBP13.66□□□□□ -0.22
PRDM16-208ENST00000514189 EFCAB12Q6NXP0 572 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 MFSD7Q6UXD7 560 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 METTL23Q86XA0 190 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 SPATA20Q8TB22 786 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 AKT1S1Q96B36 256 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 ROPN1BQ9BZX4 212 aaPredicted RBP13.66□□□□□ -0.22
PRDM16-208ENST00000514189 ROPN1Q9HAT0 212 aaPredicted RBP13.66□□□□□ -0.22
PRDM16-208ENST00000514189 SLC5A4Q9NY91 659 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 UBP1Q9NZI7 540 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 TRIM33Q9UPN9 1127 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 PLEKHG2Q9H7P9 1386 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 RIPK2O43353 540 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 PKN2Q16513 984 aaKnown RBP13.66□□□□□ -0.22
PRDM16-208ENST00000514189 LRRC23Q53EV4 343 aaPredicted RBP13.66□□□□□ -0.22
PRDM16-208ENST00000514189 ACAD11Q709F0 780 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 RAB44Q7Z6P3 723 aaPredicted RBP13.66□□□□□ -0.22
PRDM16-208ENST00000514189 ACOT1Q86TX2 421 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 LRRC6Q86X45 466 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 COL23A1Q86Y22 540 aaPredicted RBP13.66□□□□□ -0.22
PRDM16-208ENST00000514189 ALG3Q92685 438 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 DNAJC18Q9H819 358 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 YY1AP1Q9H869 796 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 ANKRD26Q9UPS8 1709 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 MYL2P10916 166 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 PBX1P40424 430 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 RHBDL3P58872 404 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 TTLL4Q14679 1199 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 NUP93Q8N1F7 819 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 NETO2Q8NC67 525 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 RUBCNQ92622 972 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 ZNF669Q96BR6 464 aaPredicted RBP13.66□□□□□ -0.22
PRDM16-208ENST00000514189 FAM167AQ96KS9 214 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 NIF3L1Q9GZT8 377 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 UPF3AQ9H1J1 476 aaKnown RBP13.66□□□□□ -0.22
PRDM16-208ENST00000514189 SENP1Q9P0U3 644 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 DNPEPQ9ULA0 475 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 TRAF3IP3Q9Y228 551 aa13.66□□□□□ -0.22
PRDM16-208ENST00000514189 IGSF9BQ9UPX0 1349 aa13.65□□□□□ -0.22
PRDM16-208ENST00000514189 PECAM1P16284 738 aaPredicted RBP13.65□□□□□ -0.22
PRDM16-208ENST00000514189 ABCG1P45844 678 aa13.65□□□□□ -0.22
PRDM16-208ENST00000514189 PIGHQ14442 188 aaPredicted RBP13.65□□□□□ -0.22
PRDM16-208ENST00000514189 PLCB4Q15147 1175 aa13.65□□□□□ -0.22
PRDM16-208ENST00000514189 EFHC2Q5JST6 749 aa13.65□□□□□ -0.22
PRDM16-208ENST00000514189 ATF7IP2Q5U623 682 aa13.65□□□□□ -0.22
PRDM16-208ENST00000514189 KIAA1841Q6NSI8 718 aa13.65□□□□□ -0.22
PRDM16-208ENST00000514189 APOBEC3HQ6NTF7 200 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms