RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 CMTM8Q8IZV2 173 aa12.99□□□□□ -0.33
SFXN1-210ENST00000513725 C3orf58Q8NDZ4 430 aa12.99□□□□□ -0.33
SFXN1-210ENST00000513725 SLC5A5Q92911 643 aa12.99□□□□□ -0.33
SFXN1-210ENST00000513725 SLC46A2Q9BY10 475 aa12.99□□□□□ -0.33
SFXN1-210ENST00000513725 CXCL16Q9H2A7 254 aa12.99□□□□□ -0.33
SFXN1-210ENST00000513725 GAREM1Q9H706 876 aa12.99□□□□□ -0.33
SFXN1-210ENST00000513725 CPNE5Q9HCH3 593 aa12.99□□□□□ -0.33
SFXN1-210ENST00000513725 U3KPZ7 1027 aaPredicted RBP12.99□□□□□ -0.33
SFXN1-210ENST00000513725 DKC1O60832 514 aaKnown RBP eCLIP12.98□□□□□ -0.33
SFXN1-210ENST00000513725 CILPO75339 1184 aa12.98□□□□□ -0.33
SFXN1-210ENST00000513725 CDC25CP30307 473 aa12.98□□□□□ -0.33
SFXN1-210ENST00000513725 MATKP42679 507 aa12.98□□□□□ -0.33
SFXN1-210ENST00000513725 USP11P51784 963 aa12.98□□□□□ -0.33
SFXN1-210ENST00000513725 NR1H3Q13133 447 aa12.98□□□□□ -0.33
SFXN1-210ENST00000513725 EMC2Q15006 297 aa12.98□□□□□ -0.33
SFXN1-210ENST00000513725 PTPRNQ16849 979 aa12.98□□□□□ -0.33
SFXN1-210ENST00000513725 HSF5Q4G112 596 aaPredicted RBP12.98□□□□□ -0.33
SFXN1-210ENST00000513725 EOGTQ5NDL2 527 aa12.98□□□□□ -0.33
SFXN1-210ENST00000513725 IL27RAQ6UWB1 636 aa12.98□□□□□ -0.33
SFXN1-210ENST00000513725 SLC41A1Q8IVJ1 513 aa12.98□□□□□ -0.33
SFXN1-210ENST00000513725 TMTC2Q8N394 836 aa12.98□□□□□ -0.33
SFXN1-210ENST00000513725 ZNF579Q8NAF0 562 aaKnown RBP12.98□□□□□ -0.33
SFXN1-210ENST00000513725 TXNDC5Q8NBS9 432 aaKnown RBP12.98□□□□□ -0.33
SFXN1-210ENST00000513725 ATP2A3Q93084 1043 aa12.98□□□□□ -0.33
SFXN1-210ENST00000513725 MTRQ99707 1265 aa12.98□□□□□ -0.33
SFXN1-210ENST00000513725 IL21RQ9HBE5 538 aa12.98□□□□□ -0.33
SFXN1-210ENST00000513725 CCL26Q9Y258 94 aa12.98□□□□□ -0.33
SFXN1-210ENST00000513725 TCRBV21S2A2A0A5A6 115 aa12.97□□□□□ -0.33
SFXN1-210ENST00000513725 AFPP02771 609 aaKnown RBP12.97□□□□□ -0.33
SFXN1-210ENST00000513725 MYF5P13349 255 aa12.97□□□□□ -0.33
SFXN1-210ENST00000513725 ANTXR2P58335 489 aa12.97□□□□□ -0.33
SFXN1-210ENST00000513725 MYO1EQ12965 1108 aa12.97□□□□□ -0.33
SFXN1-210ENST00000513725 DUSP4Q13115 394 aa12.97□□□□□ -0.33
SFXN1-210ENST00000513725 GLRA4Q5JXX5 417 aa12.97□□□□□ -0.33
SFXN1-210ENST00000513725 WDR45BQ5MNZ6 344 aa12.97□□□□□ -0.33
SFXN1-210ENST00000513725 ALLCQ8N6M5 410 aa12.97□□□□□ -0.33
SFXN1-210ENST00000513725 ZNF248Q8NDW4 579 aa12.97□□□□□ -0.33
SFXN1-210ENST00000513725 APPL2Q8NEU8 664 aa12.97□□□□□ -0.33
SFXN1-210ENST00000513725 BEST2Q8NFU1 509 aa12.97□□□□□ -0.33
SFXN1-210ENST00000513725 USP13Q92995 863 aaPredicted RBP12.97□□□□□ -0.33
SFXN1-210ENST00000513725 PPP1R10Q96QC0 940 aaKnown RBP12.97□□□□□ -0.33
SFXN1-210ENST00000513725 NFKBIZQ9BYH8 718 aa12.97□□□□□ -0.33
SFXN1-210ENST00000513725 TDP1Q9NUW8 608 aa12.97□□□□□ -0.33
SFXN1-210ENST00000513725 DUS2Q9NX74 493 aaKnown RBP12.97□□□□□ -0.33
SFXN1-210ENST00000513725 BARHL2Q9NY43 387 aa12.97□□□□□ -0.33
SFXN1-210ENST00000513725 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.97□□□□□ -0.33
SFXN1-210ENST00000513725 USP9YO00507 2555 aaPredicted RBP12.97□□□□□ -0.33
SFXN1-210ENST00000513725 SGK1O00141 431 aa12.96□□□□□ -0.33
SFXN1-210ENST00000513725 PSMD10O75832 226 aa12.96□□□□□ -0.33
SFXN1-210ENST00000513725 KLF8O95600 359 aaPredicted RBP12.96□□□□□ -0.33
SFXN1-210ENST00000513725 TBC1D25Q3MII6 688 aa12.96□□□□□ -0.33
SFXN1-210ENST00000513725 CASC1Q6TDU7 716 aa12.96□□□□□ -0.33
SFXN1-210ENST00000513725 FANCBQ8NB91 859 aa12.96□□□□□ -0.33
SFXN1-210ENST00000513725 EXOC6Q8TAG9 804 aa12.96□□□□□ -0.33
SFXN1-210ENST00000513725 FOXJ1Q92949 421 aa12.96□□□□□ -0.33
SFXN1-210ENST00000513725 GJA10Q969M2 543 aa12.96□□□□□ -0.33
SFXN1-210ENST00000513725 CCDC136Q96JN2 1154 aa12.96□□□□□ -0.33
SFXN1-210ENST00000513725 PGLYRP2Q96PD5 576 aa12.96□□□□□ -0.33
SFXN1-210ENST00000513725 FZD8Q9H461 694 aa12.96□□□□□ -0.33
SFXN1-210ENST00000513725 GOLGA2P5Q9HBQ8 144 aa12.96□□□□□ -0.33
SFXN1-210ENST00000513725 FNDC3AQ9Y2H6 1198 aaKnown RBP12.96□□□□□ -0.33
SFXN1-210ENST00000513725 NUB1Q9Y5A7 615 aa12.96□□□□□ -0.33
SFXN1-210ENST00000513725 A0A1B0GTW7 788 aa12.95□□□□□ -0.34
SFXN1-210ENST00000513725 E7EWF7 191 aa12.95□□□□□ -0.34
SFXN1-210ENST00000513725 HIP1O00291 1037 aa12.95□□□□□ -0.34
SFXN1-210ENST00000513725 N4BP3O15049 544 aa12.95□□□□□ -0.34
SFXN1-210ENST00000513725 BRINP1O60477 761 aa12.95□□□□□ -0.34
SFXN1-210ENST00000513725 QARSP47897 775 aaKnown RBP12.95□□□□□ -0.34
SFXN1-210ENST00000513725 IFNAR2P48551 515 aa12.95□□□□□ -0.34
SFXN1-210ENST00000513725 TARDBPQ13148 414 aaKnown RBP eCLIP12.95□□□□□ -0.34
SFXN1-210ENST00000513725 CAPSQ13938 189 aa12.95□□□□□ -0.34
SFXN1-210ENST00000513725 ERICH1Q86X53 443 aa12.95□□□□□ -0.34
SFXN1-210ENST00000513725 REXO1Q8N1G1 1221 aaKnown RBP12.95□□□□□ -0.34
SFXN1-210ENST00000513725 IL17RCQ8NAC3 791 aa12.95□□□□□ -0.34
SFXN1-210ENST00000513725 OSCP1Q8WVF1 389 aa12.95□□□□□ -0.34
SFXN1-210ENST00000513725 LIN37Q96GY3 246 aaPredicted RBP12.95□□□□□ -0.34
SFXN1-210ENST00000513725 ZNF419Q96HQ0 510 aaPredicted RBP12.95□□□□□ -0.34
SFXN1-210ENST00000513725 ADPGKQ9BRR6 497 aa12.95□□□□□ -0.34
SFXN1-210ENST00000513725 OXCT2Q9BYC2 517 aaPredicted RBP12.95□□□□□ -0.34
SFXN1-210ENST00000513725 BTBD3Q9Y2F9 522 aa12.95□□□□□ -0.34
SFXN1-210ENST00000513725 GDAQ9Y2T3 454 aa12.95□□□□□ -0.34
SFXN1-210ENST00000513725 CNTNAP5Q8WYK1 1306 aa12.94□□□□□ -0.34
SFXN1-210ENST00000513725 IGHV1OR15-9A0A0B4J2B8 117 aa12.94□□□□□ -0.34
SFXN1-210ENST00000513725 PODXLO00592 558 aa12.94□□□□□ -0.34
SFXN1-210ENST00000513725 NDUFS2O75306 463 aa12.94□□□□□ -0.34
SFXN1-210ENST00000513725 ZNF217O75362 1048 aa12.94□□□□□ -0.34
SFXN1-210ENST00000513725 CYP21A2P08686 494 aa12.94□□□□□ -0.34
SFXN1-210ENST00000513725 CDK4P11802 303 aa12.94□□□□□ -0.34
SFXN1-210ENST00000513725 DDX6P26196 483 aaKnown RBP eCLIP12.94□□□□□ -0.34
SFXN1-210ENST00000513725 MARCKSP29966 332 aaPredicted RBP12.94□□□□□ -0.34
SFXN1-210ENST00000513725 TIE1P35590 1138 aa12.94□□□□□ -0.34
SFXN1-210ENST00000513725 GRK6P43250 576 aa12.94□□□□□ -0.34
SFXN1-210ENST00000513725 VAC14Q08AM6 782 aa12.94□□□□□ -0.34
SFXN1-210ENST00000513725 MTF1Q14872 753 aa12.94□□□□□ -0.34
SFXN1-210ENST00000513725 VEPH1Q14D04 833 aa12.94□□□□□ -0.34
SFXN1-210ENST00000513725 TMEM132AQ24JP5 1023 aa12.94□□□□□ -0.34
SFXN1-210ENST00000513725 HLA-BQ31612 363 aa12.94□□□□□ -0.34
SFXN1-210ENST00000513725 B3GNT9Q6UX72 402 aa12.94□□□□□ -0.34
SFXN1-210ENST00000513725 OTUD6AQ7L8S5 288 aa12.94□□□□□ -0.34
SFXN1-210ENST00000513725 SGMS1Q86VZ5 419 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms