RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 LEO1Q8WVC0 666 aaPredicted RBP11.85□□□□□ -0.51
SKP2-207ENST00000513263 POMGNT1Q8WZA1 660 aa11.85□□□□□ -0.51
SKP2-207ENST00000513263 DDX1Q92499 740 aaKnown RBP11.85□□□□□ -0.51
SKP2-207ENST00000513263 ZSWIM3Q96MP5 696 aa11.85□□□□□ -0.51
SKP2-207ENST00000513263 ZCWPW1Q9H0M4 648 aa11.85□□□□□ -0.51
SKP2-207ENST00000513263 BLOC1S4Q9NUP1 217 aa11.85□□□□□ -0.51
SKP2-207ENST00000513263 DPP3Q9NY33 737 aa11.85□□□□□ -0.51
SKP2-207ENST00000513263 R3HCC1Q9Y3T6 440 aaKnown RBP11.85□□□□□ -0.51
SKP2-207ENST00000513263 ATG2BQ96BY7 2078 aa11.85□□□□□ -0.51
SKP2-207ENST00000513263 EML5Q05BV3 1969 aa11.85□□□□□ -0.51
SKP2-207ENST00000513263 LAMA1P25391 3075 aa11.84□□□□□ -0.51
SKP2-207ENST00000513263 CYB561D2O14569 222 aa11.84□□□□□ -0.51
SKP2-207ENST00000513263 VNN2O95498 520 aa11.84□□□□□ -0.51
SKP2-207ENST00000513263 CHRNB1P11230 501 aa11.84□□□□□ -0.51
SKP2-207ENST00000513263 PDE6CP51160 858 aa11.84□□□□□ -0.51
SKP2-207ENST00000513263 MYL7Q01449 175 aa11.84□□□□□ -0.51
SKP2-207ENST00000513263 MCM6Q14566 821 aa11.84□□□□□ -0.51
SKP2-207ENST00000513263 SF3A1Q15459 793 aaKnown RBP11.84□□□□□ -0.51
SKP2-207ENST00000513263 ITPRIPL2Q3MIP1 535 aa11.84□□□□□ -0.51
SKP2-207ENST00000513263 CCDC73Q6ZRK6 1079 aa11.84□□□□□ -0.51
SKP2-207ENST00000513263 GAREM2Q75VX8 874 aa11.84□□□□□ -0.51
SKP2-207ENST00000513263 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.84□□□□□ -0.51
SKP2-207ENST00000513263 ATAD1Q8NBU5 361 aa11.84□□□□□ -0.51
SKP2-207ENST00000513263 NETO1Q8TDF5 533 aa11.84□□□□□ -0.51
SKP2-207ENST00000513263 PYM1Q9BRP8 204 aaKnown RBP11.84□□□□□ -0.51
SKP2-207ENST00000513263 MRPL44Q9H9J2 332 aaKnown RBP11.84□□□□□ -0.51
SKP2-207ENST00000513263 ABCB6Q9NP58 842 aa11.84□□□□□ -0.51
SKP2-207ENST00000513263 OLFML3Q9NRN5 406 aa11.84□□□□□ -0.51
SKP2-207ENST00000513263 PCDHB5Q9Y5E4 795 aa11.84□□□□□ -0.51
SKP2-207ENST00000513263 PCDHB13Q9Y5F0 798 aa11.84□□□□□ -0.51
SKP2-207ENST00000513263 MORC2Q9Y6X9 1032 aaPredicted RBP11.84□□□□□ -0.51
SKP2-207ENST00000513263 MYH10P35580 1976 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 NUP205Q92621 2012 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 CCDC163A0A0D9SF12 145 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 SHISA7A6NL88 538 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 SLC38A8A6NNN8 435 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 KPNA7A9QM74 516 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 CSH1P0DML2 217 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 CSH2P0DML3 217 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 GJA1P17302 382 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 GARTP22102 1010 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 ACOT2P49753 483 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 RPL10AP62906 217 aaKnown RBP11.83□□□□□ -0.52
SKP2-207ENST00000513263 BFSP1Q12934 665 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 ZNF268Q14587 947 aaPredicted RBP11.83□□□□□ -0.52
SKP2-207ENST00000513263 CC2D1AQ6P1N0 951 aaPredicted RBP11.83□□□□□ -0.52
SKP2-207ENST00000513263 SLC39A4Q6P5W5 647 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 TSSK4Q6SA08 328 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 PRR23BQ6ZRT6 265 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 SV2BQ7L1I2 683 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 ZNF720Q7Z2F6 126 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 DCLK2Q8N568 766 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 LRRC52Q8N7C0 313 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 OR10T2Q8NGX3 314 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 MRPS31Q92665 395 aaKnown RBP11.83□□□□□ -0.52
SKP2-207ENST00000513263 CEP295NLQ96MC4 621 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 ACCSQ96QU6 501 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 FIZ1Q96SL8 496 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 LRRC27Q9C0I9 530 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 CRISPLD1Q9H336 500 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 TMEM206Q9H813 350 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 EHD2Q9NZN4 543 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 ITGA11Q9UKX5 1188 aa11.83□□□□□ -0.52
SKP2-207ENST00000513263 SDK1Q7Z5N4 2213 aa11.82□□□□□ -0.52
SKP2-207ENST00000513263 VPS37CA5D8V6 355 aaPredicted RBP11.82□□□□□ -0.52
SKP2-207ENST00000513263 HUS1O60921 280 aa11.82□□□□□ -0.52
SKP2-207ENST00000513263 PPP1R37O75864 691 aa11.82□□□□□ -0.52
SKP2-207ENST00000513263 ATF6P18850 670 aa11.82□□□□□ -0.52
SKP2-207ENST00000513263 PCSK1P29120 753 aa11.82□□□□□ -0.52
SKP2-207ENST00000513263 NMT1P30419 496 aaKnown RBP11.82□□□□□ -0.52
SKP2-207ENST00000513263 LHX1P48742 406 aa11.82□□□□□ -0.52
SKP2-207ENST00000513263 GUCY2FP51841 1108 aa11.82□□□□□ -0.52
SKP2-207ENST00000513263 GRSF1Q12849 480 aaKnown RBP eCLIP11.82□□□□□ -0.52
SKP2-207ENST00000513263 CCINQ13939 588 aa11.82□□□□□ -0.52
SKP2-207ENST00000513263 SIM2Q14190 667 aaPredicted RBP11.82□□□□□ -0.52
SKP2-207ENST00000513263 SURF1Q15526 300 aa11.82□□□□□ -0.52
SKP2-207ENST00000513263 L1TD1Q5T7N2 865 aaKnown RBP11.82□□□□□ -0.52
SKP2-207ENST00000513263 POTEHQ6S545 545 aa11.82□□□□□ -0.52
SKP2-207ENST00000513263 SFR1Q86XK3 245 aa11.82□□□□□ -0.52
SKP2-207ENST00000513263 BRSK2Q8IWQ3 736 aa11.82□□□□□ -0.52
SKP2-207ENST00000513263 CMTM8Q8IZV2 173 aa11.82□□□□□ -0.52
SKP2-207ENST00000513263 FSIP1Q8NA03 581 aa11.82□□□□□ -0.52
SKP2-207ENST00000513263 TRMT2BQ96GJ1 504 aaKnown RBP11.82□□□□□ -0.52
SKP2-207ENST00000513263 FUBP3Q96I24 572 aaKnown RBP eCLIP11.82□□□□□ -0.52
SKP2-207ENST00000513263 ACBD6Q9BR61 282 aa11.82□□□□□ -0.52
SKP2-207ENST00000513263 MKNK1Q9BUB5 465 aa11.82□□□□□ -0.52
SKP2-207ENST00000513263 ABI2Q9NYB9 513 aaPredicted RBP11.82□□□□□ -0.52
SKP2-207ENST00000513263 SLC27A5Q9Y2P5 690 aa11.82□□□□□ -0.52
SKP2-207ENST00000513263 MAP1BP46821 2468 aaKnown RBP11.82□□□□□ -0.52
SKP2-207ENST00000513263 PPEF2O14830 753 aa11.81□□□□□ -0.52
SKP2-207ENST00000513263 AKAP3O75969 853 aa11.81□□□□□ -0.52
SKP2-207ENST00000513263 GCNT3O95395 438 aa11.81□□□□□ -0.52
SKP2-207ENST00000513263 HAPLN1P10915 354 aaPredicted RBP11.81□□□□□ -0.52
SKP2-207ENST00000513263 PFKLP17858 780 aa11.81□□□□□ -0.52
SKP2-207ENST00000513263 SATB1Q01826 763 aa11.81□□□□□ -0.52
SKP2-207ENST00000513263 MYO1EQ12965 1108 aa11.81□□□□□ -0.52
SKP2-207ENST00000513263 PDGFRLQ15198 375 aa11.81□□□□□ -0.52
SKP2-207ENST00000513263 MAPRE1Q15691 268 aaKnown RBP11.81□□□□□ -0.52
SKP2-207ENST00000513263 FBXO43Q4G163 708 aa11.81□□□□□ -0.52
SKP2-207ENST00000513263 STXBP5Q5T5C0 1151 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms