RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 PIK3R2O00459 728 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 VWA5AO00534 786 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 HGSO14964 777 aaPredicted RBP4.44□□□□□ -1.7
VCAN-209ENST00000513016 KRT14P02533 472 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 TRIM49P0CI25 452 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 TRIM49CP0CI26 452 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 GFAPP14136 432 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 NCF2P19878 526 aaPredicted RBP4.44□□□□□ -1.7
VCAN-209ENST00000513016 SPARCL1Q14515 664 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 FAM171A1Q5VUB5 890 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 TMEM86AQ8N2M4 240 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 ACRBPQ8NEB7 543 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 L3MBTL3Q96JM7 780 aaPredicted RBP4.44□□□□□ -1.7
VCAN-209ENST00000513016 RIPOR3Q96MK2 946 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 YY1AP1Q9H869 796 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 SETD4Q9NVD3 440 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 C6orf203Q9P0P8 240 aaPredicted RBP4.44□□□□□ -1.7
VCAN-209ENST00000513016 PAK5Q9P286 719 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 THEGQ9P2T0 379 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 CYP26A1O43174 497 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 TBC1D12O60347 775 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 BMP10O95393 424 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 RPN2P04844 631 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 MAPTP10636 758 aaKnown RBP4.44□□□□□ -1.7
VCAN-209ENST00000513016 INSRRP14616 1297 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 ITGALP20701 1170 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 ACO1P21399 889 aaKnown RBP4.44□□□□□ -1.7
VCAN-209ENST00000513016 KRT20P35900 424 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 GUCA1AP43080 201 aaPredicted RBP4.44□□□□□ -1.7
VCAN-209ENST00000513016 RAP1GDS1P52306 607 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 CAMK2GQ13555 558 aaPredicted RBP4.44□□□□□ -1.7
VCAN-209ENST00000513016 NAA25Q14CX7 972 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 TRIP13Q15645 432 aaPredicted RBP4.44□□□□□ -1.7
VCAN-209ENST00000513016 STX19Q8N4C7 294 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 MSL3Q8N5Y2 521 aaKnown RBP4.44□□□□□ -1.7
VCAN-209ENST00000513016 SNX31Q8N9S9 440 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 HES6Q96HZ4 224 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 HEMGNQ9BXL5 484 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 ADGRE3Q9BY15 652 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.44□□□□□ -1.7
VCAN-209ENST00000513016 TMEM63CQ9P1W3 806 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 CDV3Q9UKY7 258 aaKnown RBP4.44□□□□□ -1.7
VCAN-209ENST00000513016 ARHGAP26Q9UNA1 814 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 ITIH6Q6UXX5 1313 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 ZNF521Q96K83 1311 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 TRAV19A0A0A6YYK7 116 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 LOC102724159A0A0B4J2E5 919 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 SPECC1L-ADORA2AF8WAN1 911 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 OPLAHO14841 1288 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 CTSEP14091 401 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 PTPRAP18433 802 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 YWHAQP27348 245 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 DHX9Q08211 1270 aaKnown RBP4.44□□□□□ -1.7
VCAN-209ENST00000513016 PWP2Q15269 919 aaKnown RBP4.44□□□□□ -1.7
VCAN-209ENST00000513016 ZRANB3Q5FWF4 1079 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 CATSPERGQ6ZRH7 1159 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 FAM9CQ8IZT9 166 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 VPS37AQ8NEZ2 397 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 DEFB118Q96PH6 123 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 ELOVL4Q9GZR5 314 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 PLEKHA4Q9H4M7 779 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 ASB7Q9H672 318 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 AGO4Q9HCK5 861 aaKnown RBP4.44□□□□□ -1.7
VCAN-209ENST00000513016 MRPS23Q9Y3D9 190 aaKnown RBP4.44□□□□□ -1.7
VCAN-209ENST00000513016 DYRK1BQ9Y463 629 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 ARHGAP23Q9P227 1491 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 DIP2BQ9P265 1576 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 ANO9A1A5B4 782 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 C1QTNF3-AMACRE9PGA6 284 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 TOMM70O94826 608 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 FGGP02679 453 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 TYK2P29597 1187 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 FMO5P49326 533 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 RHOAP61586 193 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 MYBPC2Q14324 1141 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 PKN2Q16513 984 aaKnown RBP4.44□□□□□ -1.7
VCAN-209ENST00000513016 FNDC3BQ53EP0 1204 aaKnown RBP4.44□□□□□ -1.7
VCAN-209ENST00000513016 IGDCC4Q8TDY8 1250 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 SPIRE2Q8WWL2 714 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 EIF2AQ9BY44 585 aaKnown RBP4.44□□□□□ -1.7
VCAN-209ENST00000513016 FOXP3Q9BZS1 431 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 FAM49BQ9NUQ9 324 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 DDIT4Q9NX09 232 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 VPS51Q9UID3 782 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 VPS28Q9UK41 221 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 APOBEC2Q9Y235 224 aaKnown RBP4.44□□□□□ -1.7
VCAN-209ENST00000513016 GRID2IPA4D2P6 1211 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 UBXN8O00124 270 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 MFAP3LO75121 409 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 ARIH2O95376 493 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 VTNP04004 478 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 ZNF135P52742 658 aaPredicted RBP4.44□□□□□ -1.7
VCAN-209ENST00000513016 MORF4L2Q15014 288 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 EFTUD2Q15029 972 aaKnown RBP eCLIP4.44□□□□□ -1.7
VCAN-209ENST00000513016 PLCL1Q15111 1095 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 Q4G0T1 1027 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 MFSD4BQ5TF39 518 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 MRNIPQ6NTE8 343 aa4.44□□□□□ -1.7
VCAN-209ENST00000513016 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.44□□□□□ -1.7
VCAN-209ENST00000513016 WDR49Q8IV35 697 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms