RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 PRR16Q569H4 304 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 PLA2G4FQ68DD2 849 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 ZNF280DQ6N043 979 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 CC2D1AQ6P1N0 951 aaPredicted RBP10.32□□□□□ -0.76
CLCN3-208ENST00000512813 IL27RAQ6UWB1 636 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 RNF19BQ6ZMZ0 732 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 FERMT3Q86UX7 667 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 EXOC8Q8IYI6 725 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 RGL4Q8IZJ4 473 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 ALLCQ8N6M5 410 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 ENGASEQ8NFI3 743 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 RIN3Q8TB24 985 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 PSMG2Q969U7 264 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 RIT2Q99578 217 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 DSCC1Q9BVC3 393 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 UNC45AQ9H3U1 944 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 CCL26Q9Y258 94 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 PPME1Q9Y570 386 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 PCDHGA1Q9Y5H4 931 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 ZFHX3Q15911 3703 aa10.32□□□□□ -0.76
CLCN3-208ENST00000512813 IGHV1OR15-9A0A0B4J2B8 117 aa10.31□□□□□ -0.76
CLCN3-208ENST00000512813 TCRBV21S2A2A0A5A6 115 aa10.31□□□□□ -0.76
CLCN3-208ENST00000512813 SGK1O00141 431 aa10.31□□□□□ -0.76
CLCN3-208ENST00000512813 TBX3O15119 743 aa10.31□□□□□ -0.76
CLCN3-208ENST00000512813 B4GALT5O43286 388 aa10.31□□□□□ -0.76
CLCN3-208ENST00000512813 MARCH6O60337 910 aa10.31□□□□□ -0.76
CLCN3-208ENST00000512813 GAS7O60861 476 aa10.31□□□□□ -0.76
CLCN3-208ENST00000512813 CPB1P15086 417 aa10.31□□□□□ -0.76
CLCN3-208ENST00000512813 PCBP4P57723 403 aaKnown RBP10.31□□□□□ -0.76
CLCN3-208ENST00000512813 TRDNQ13061 729 aa10.31□□□□□ -0.76
CLCN3-208ENST00000512813 TARDBPQ13148 414 aaKnown RBP eCLIP10.31□□□□□ -0.76
CLCN3-208ENST00000512813 SYCP2LQ5T4T6 812 aa10.31□□□□□ -0.76
CLCN3-208ENST00000512813 PGBD3Q8N328 593 aa10.31□□□□□ -0.76
CLCN3-208ENST00000512813 IL17RCQ8NAC3 791 aa10.31□□□□□ -0.76
CLCN3-208ENST00000512813 TXNDC5Q8NBS9 432 aaKnown RBP10.31□□□□□ -0.76
CLCN3-208ENST00000512813 TCP11Q8WWU5 503 aa10.31□□□□□ -0.76
CLCN3-208ENST00000512813 TSC1Q92574 1164 aa10.31□□□□□ -0.76
CLCN3-208ENST00000512813 USP13Q92995 863 aaPredicted RBP10.31□□□□□ -0.76
CLCN3-208ENST00000512813 ZNF419Q96HQ0 510 aaPredicted RBP10.31□□□□□ -0.76
CLCN3-208ENST00000512813 SLC46A2Q9BY10 475 aa10.31□□□□□ -0.76
CLCN3-208ENST00000512813 GLT8D2Q9H1C3 349 aa10.31□□□□□ -0.76
CLCN3-208ENST00000512813 STARD5Q9NSY2 213 aa10.31□□□□□ -0.76
CLCN3-208ENST00000512813 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.31□□□□□ -0.76
CLCN3-208ENST00000512813 F8P00451 2351 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 A0A1B0GTW7 788 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 KLF8O95600 359 aaPredicted RBP10.3□□□□□ -0.76
CLCN3-208ENST00000512813 CALM1P0DP23 149 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 CALM2P0DP24 149 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 CALM3P0DP25 149 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 CDK4P11802 303 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 CDC25CP30307 473 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 CIITAP33076 1130 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 RFC5P40937 340 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 GRK6P43250 576 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 ALDH1A3P47895 512 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 CLDN6P56747 220 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 NFKB2Q00653 900 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 POU5F1BQ06416 359 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 BFSP1Q12934 665 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 SUZ12Q15022 739 aaKnown RBP10.3□□□□□ -0.76
CLCN3-208ENST00000512813 HLA-BQ31612 363 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 WDR45BQ5MNZ6 344 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 EOGTQ5NDL2 527 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 HIST2H2BCQ6DN03 193 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 MIER3Q7Z3K6 550 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 DNAJB7Q7Z6W7 309 aaPredicted RBP10.3□□□□□ -0.76
CLCN3-208ENST00000512813 ATP2A3Q93084 1043 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 HIC2Q96JB3 615 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 PPP1R10Q96QC0 940 aaKnown RBP10.3□□□□□ -0.76
CLCN3-208ENST00000512813 PHF12Q96QT6 1004 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 TEKT3Q9BXF9 490 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 CRISPLD1Q9H336 500 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 GMIPQ9P107 970 aa10.3□□□□□ -0.76
CLCN3-208ENST00000512813 MYLKQ15746 1914 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 BLACEA4D250 179 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 MSH4O15457 936 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 ELAVL4P26378 380 aaKnown RBP10.29□□□□□ -0.76
CLCN3-208ENST00000512813 AVPR1AP37288 418 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 OPRD1P41143 372 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 NPEPPSP55786 919 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 BNC1Q01954 994 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 TLE1Q04724 770 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 MXD4Q14582 209 aaPredicted RBP10.29□□□□□ -0.76
CLCN3-208ENST00000512813 HES3Q5TGS1 186 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 LRCH2Q5VUJ6 765 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 KIAA1614Q5VZ46 1190 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 ITIH5Q86UX2 942 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 EXD3Q8N9H8 876 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 IGDCC4Q8TDY8 1250 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 SLC5A5Q92911 643 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 FOXJ1Q92949 421 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 GCNAQ96QF7 691 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 NFKBIZQ9BYH8 718 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 IL21Q9HBE4 155 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 GOLGA2P5Q9HBQ8 144 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 TDP1Q9NUW8 608 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 CALCOCO1Q9P1Z2 691 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 NFE2L3Q9Y4A8 694 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 KNL1Q8NG31 2342 aa10.29□□□□□ -0.76
CLCN3-208ENST00000512813 CELSR2Q9HCU4 2923 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms