RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 GPR150Q8NGU9 434 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 NEIL1Q96FI4 390 aaPredicted RBP6.74□□□□□ -1.33
CHD1-208ENST00000512392 MSLNLQ96KJ4 702 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 SLC39A3Q9BRY0 314 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 C1orf21Q9H246 121 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 CCDC86Q9H6F5 360 aaKnown RBP6.74□□□□□ -1.33
CHD1-208ENST00000512392 IPPKQ9H8X2 491 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 ERVMER34-1Q9H9K5 563 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 SP110Q9HB58 689 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 ZNF304Q9HCX3 659 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 TCF7L2Q9NQB0 619 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 SNTG1Q9NSN8 517 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 UBA2Q9UBT2 640 aaPredicted RBP6.74□□□□□ -1.33
CHD1-208ENST00000512392 MSRAQ9UJ68 235 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 ADAM30Q9UKF2 790 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 JRKLQ9Y4A0 524 aa6.74□□□□□ -1.33
CHD1-208ENST00000512392 CYP2D7A0A087X1C5 515 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 SLC12A8A0AV02 714 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 RBAK-RBAKDNI3L0D1 243 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 ITGA5P08648 1049 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 MYL4P12829 197 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 LAMP2P13473 410 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 ALADP13716 330 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 GLB1P16278 677 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 SCRN1Q12765 414 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 DPY19L1Q2PZI1 675 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 PITRM1Q5JRX3 1037 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 ANGEL2Q5VTE6 544 aaKnown RBP6.73□□□□□ -1.33
CHD1-208ENST00000512392 RRAGBQ5VZM2 374 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 FDX2Q6P4F2 183 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 ZNF574Q6ZN55 896 aaPredicted RBP6.73□□□□□ -1.33
CHD1-208ENST00000512392 ADGRA1Q86SQ6 560 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 CTCFLQ8NI51 663 aaPredicted RBP6.73□□□□□ -1.33
CHD1-208ENST00000512392 SCAMP5Q8TAC9 235 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 DEPDC1BQ8WUY9 529 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 DPF2Q92785 391 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 LRRC59Q96AG4 307 aaKnown RBP6.73□□□□□ -1.33
CHD1-208ENST00000512392 ELMO3Q96BJ8 720 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 WDR89Q96FK6 387 aaPredicted RBP6.73□□□□□ -1.33
CHD1-208ENST00000512392 CCDC114Q96M63 670 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 SSBP4Q9BWG4 385 aaPredicted RBP6.73□□□□□ -1.33
CHD1-208ENST00000512392 KRT23Q9C075 422 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 SEMA6BQ9H3T3 888 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 TAF1DQ9H5J8 278 aaPredicted RBP6.73□□□□□ -1.33
CHD1-208ENST00000512392 ERVK-5Q9HDB9 667 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 NRIP3Q9NQ35 241 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 NINJ2Q9NZG7 142 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 CPSF3Q9UKF6 684 aaKnown RBP6.73□□□□□ -1.33
CHD1-208ENST00000512392 SMG5Q9UPR3 1016 aaKnown RBP6.73□□□□□ -1.33
CHD1-208ENST00000512392 PCDHB1Q9Y5F3 818 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 CCP110O43303 1012 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 ADAMTS4O75173 837 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 TSPAN9O75954 239 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 STAT5AP42229 794 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 ASMTP46597 345 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 DLG4P78352 724 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 CBX3Q13185 183 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 ARHGAP44Q17R89 818 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 ZNF827Q17R98 1081 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.73□□□□□ -1.33
CHD1-208ENST00000512392 ZBTB37Q5TC79 503 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 GPAT2Q6NUI2 795 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 ZCCHC12Q6PEW1 402 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 BBS12Q6ZW61 710 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 ADGRG6Q86SQ4 1221 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 ARMC8Q8IUR7 673 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 DIS3L2Q8IYB7 885 aaKnown RBP6.73□□□□□ -1.33
CHD1-208ENST00000512392 GALNT4Q8N4A0 578 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 FBXO15Q8NCQ5 510 aaPredicted RBP6.73□□□□□ -1.33
CHD1-208ENST00000512392 CCDC148Q8NFR7 591 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.73□□□□□ -1.334e-7■■■■■ 36.7
CHD1-208ENST00000512392 THAP4Q8WY91 577 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 NCSTNQ92542 709 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 FATE1Q969F0 183 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 CFAP36Q96G28 342 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 MEGF10Q96KG7 1140 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 PTPN18Q99952 460 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 ACPTQ9BZG2 426 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 PABPC3Q9H361 631 aaKnown RBP6.73□□□□□ -1.33
CHD1-208ENST00000512392 RAD18Q9NS91 495 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 TAS2R3Q9NYW6 316 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 TBC1D14Q9P2M4 693 aa6.73□□□□□ -1.33
CHD1-208ENST00000512392 LRRC72A6NJI9 287 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 WNT9AO14904 365 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 HNRNPDLO14979 420 aaKnown RBP6.72□□□□□ -1.33
CHD1-208ENST00000512392 ZNF862O60290 1169 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 TBC1D4O60343 1298 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 NEMFO60524 1076 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 TSC22D2O75157 780 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 EPN2O95208 641 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 OLFM2O95897 454 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 IFNB1P01574 187 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 LRG1P02750 347 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 PROCP04070 461 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 THBDP07204 575 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 ITGA4P13612 1032 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 TNNT1P13805 278 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 NPR1P16066 1061 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 FERP16591 822 aa6.72□□□□□ -1.33
CHD1-208ENST00000512392 KELP23276 732 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms