RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 TDRD15B5MCY1 1934 aaKnown RBP11.33□□□□□ -0.6
PDLIM5-217ENST00000512274 A0A087WZ62 844 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 TAF4O00268 1085 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 TEX33O43247 280 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 STX10O60499 249 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 FOXD2O60548 495 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 PRPF6O94906 941 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 NR3C1P04150 777 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 NR2F2P24468 414 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 NMT1P30419 496 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 HOXC13P31276 330 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 NPTX2P47972 431 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 CXCL12P48061 93 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 NOVA1P51513 510 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 CCZ1BP86790 482 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 CCZ1P86791 482 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 DSG1Q02413 1049 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 RAD51AP2Q09MP3 1159 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 DRP2Q13474 957 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 ARMCX5Q6P1M9 558 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 LILRA6Q6PI73 481 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 HAUS6Q7Z4H7 955 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 TCP11Q8WWU5 503 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 RSPH1Q8WYR4 309 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 PGBD4Q96DM1 585 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 MCRS1Q96EZ8 462 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 IFT74Q96LB3 600 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 FDXACB1Q9BRP7 624 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 NFKBIZQ9BYH8 718 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 GCOM2Q9BZD3 368 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 NDST4Q9H3R1 872 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 ZHX3Q9H4I2 956 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 TMEM134Q9H6X4 195 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 RSAD1Q9HA92 442 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 AGPAT3Q9NRZ7 376 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 SPTLC3Q9NUV7 552 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 HCFC1R1Q9NWW0 138 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 TAB2Q9NYJ8 693 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 FBXL5Q9UKA1 691 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 PCDHB2Q9Y5E7 798 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 STYXL1Q9Y6J8 313 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 TICRRQ7Z2Z1 1910 aa11.32□□□□□ -0.6
PDLIM5-217ENST00000512274 NOTCH4Q99466 2003 aa11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 ADAMTS20P59510 1910 aa11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 K7ENM7 598 aa11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 ASAP2O43150 1006 aa11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 ZNF623O75123 536 aa11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 PAPLNO95428 1278 aa11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 EPB41P11171 864 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 MSNP26038 577 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 HNRNPH3P31942 346 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 CLCN1P35523 988 aa11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 PSMC2P35998 433 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 MTIF2P46199 727 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 RAB27AP51159 221 aa11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 EFNA5P52803 228 aa11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 UBXN1Q04323 297 aa11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 ZNF252P-AS1Q0IIN9 211 aa11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 GRM2Q14416 872 aa11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 MXD4Q14582 209 aaPredicted RBP11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 MTERF2Q49AM1 385 aa11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 PPM1LQ5SGD2 360 aa11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 FKBP15Q5T1M5 1219 aa11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 CDCA2Q69YH5 1023 aaPredicted RBP11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 PRSS55Q6UWB4 352 aaPredicted RBP11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 CATSPER4Q7RTX7 472 aa11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 IFNLR1Q8IU57 520 aaPredicted RBP11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 NELFCDQ8IXH7 590 aa11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 TC2NQ8N9U0 490 aa11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 TRAIPQ9BWF2 469 aa11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 TBC1D7Q9P0N9 293 aa11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 ARMCX3Q9UH62 379 aaPredicted RBP11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 TBX20Q9UMR3 447 aa11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 SIK3Q9Y2K2 1263 aa11.31□□□□□ -0.6
PDLIM5-217ENST00000512274 FRYQ5TBA9 3013 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 TMEM8BA6NDV4 472 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 SFI1A8K8P3 1242 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 AKR1B15C9JRZ8 316 aaPredicted RBP11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 P4HA2O15460 535 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 ARHGAP6O43182 974 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 MFAP3LO75121 409 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 GYPCP04921 128 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 TPM1P09493 284 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 ZNF806P0C7X5 589 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 GARTP22102 1010 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 CDK17Q00537 523 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 SOWAHCQ53LP3 525 aaPredicted RBP11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 RNF43Q68DV7 783 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 TMEM139Q8IV31 216 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 NPAS3Q8IXF0 933 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 COLGALT2Q8IYK4 626 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 RNF168Q8IYW5 571 aaPredicted RBP11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 ZNF687Q8N1G0 1237 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 ZNF710Q8N1W2 664 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 FAM3CQ92520 227 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 RABGGTAQ92696 567 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 GATA6Q92908 595 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 KIF12Q96FN5 646 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 DNAJC7Q99615 494 aa11.3□□□□□ -0.6
PDLIM5-217ENST00000512274 SCNM1Q9BWG6 230 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms