RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 IL18RAPO95256 599 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 LRG1P02750 347 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 CYP11A1P05108 521 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 ODC1P11926 461 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 CPB1P15086 417 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 FCARP24071 287 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 CASP1P29466 404 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 EPHA5P54756 1037 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 DNM1Q05193 864 aaKnown RBP6.29□□□□□ -1.4
RNF4-217ENST00000511892 EHHADHQ08426 723 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 TWF1Q12792 350 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 DUSP4Q13115 394 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 GPR17Q13304 367 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 ALCAMQ13740 583 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 MYBPC2Q14324 1141 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 RESP18Q5W5W9 173 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 TANGO2Q6ICL3 276 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 CENPPQ6IPU0 288 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 CNNM4Q6P4Q7 775 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 MTSS1LQ765P7 747 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 EPM2AIP1Q7L775 607 aaPredicted RBP6.29□□□□□ -1.4
RNF4-217ENST00000511892 USP37Q86T82 979 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 LRRTM3Q86VH5 581 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 NT5DC4Q86YG4 428 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 TMC8Q8IU68 726 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 BRSK2Q8IWQ3 736 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 SYCP3Q8IZU3 236 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 TTC9BQ8N6N2 239 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 DHX58Q96C10 678 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 CHAMP1Q96JM3 812 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 ZSWIM3Q96MP5 696 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 C7orf25Q9BPX7 421 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 LRRC3Q9BY71 257 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 OXCT2Q9BYC2 517 aaPredicted RBP6.29□□□□□ -1.4
RNF4-217ENST00000511892 TRIM9Q9C026 710 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 CUEDC2Q9H467 287 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 PCIF1Q9H4Z3 704 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 TBC1D17Q9HA65 648 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 GDE1Q9NZC3 331 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 RCOR1Q9UKL0 485 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 CFAP45Q9UL16 551 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 EXOC7Q9UPT5 735 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 SLC27A5Q9Y2P5 690 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 YIPF1Q9Y548 306 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 MYOFQ9NZM1 2061 aa6.29□□□□□ -1.4
RNF4-217ENST00000511892 NCANO14594 1321 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 PTPRJQ12913 1337 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 KIAA1549LQ6ZVL6 1849 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 MTMR11A4FU01 709 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 SHISA7A6NL88 538 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 KPNA7A9QM74 516 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 EIF3DO15371 548 aaKnown RBP eCLIP6.28□□□□□ -1.4
RNF4-217ENST00000511892 TGFB1I1O43294 461 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 EXTL3O43909 919 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 ECI2O75521 394 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 SOAT2O75908 522 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 LDHAP00338 332 aaKnown RBP6.28□□□□□ -1.4
RNF4-217ENST00000511892 GLULP15104 373 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 GJA1P17302 382 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 PAX3P23760 479 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 TAF6P49848 677 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 CDR1P51861 262 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 STARD6P59095 220 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 TFAMQ00059 246 aaKnown RBP6.28□□□□□ -1.4
RNF4-217ENST00000511892 SNW1Q13573 536 aaKnown RBP6.28□□□□□ -1.4
RNF4-217ENST00000511892 SLC39A12Q504Y0 691 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 PKDCCQ504Y2 493 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 FAM78AQ5JUQ0 283 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 WSCD1Q658N2 575 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 PHLDB3Q6NSJ2 640 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 PDZD4Q76G19 769 aaPredicted RBP6.28□□□□□ -1.4
RNF4-217ENST00000511892 CCDC65Q8IXS2 484 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 CCDC105Q8IYK2 499 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 GRAMD1CQ8IYS0 662 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 C1orf127Q8N9H9 656 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 IQUBQ8NA54 791 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 DTWD2Q8NBA8 298 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 ATAD1Q8NBU5 361 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 SHKBP1Q8TBC3 707 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 ZNF507Q8TCN5 953 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 KCNG4Q8TDN1 519 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 SCFD1Q8WVM8 642 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 ATOH1Q92858 354 aaPredicted RBP6.28□□□□□ -1.4
RNF4-217ENST00000511892 ELSPBP1Q96BH3 223 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 ZNF512Q96ME7 567 aaPredicted RBP6.28□□□□□ -1.4
RNF4-217ENST00000511892 ASB16Q96NS5 453 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 PYM1Q9BRP8 204 aaKnown RBP6.28□□□□□ -1.4
RNF4-217ENST00000511892 FOXQ1Q9C009 403 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 ZCWPW1Q9H0M4 648 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 BLZF1Q9H2G9 400 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 TMEM206Q9H813 350 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 PDE11AQ9HCR9 933 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 ARHGEF3Q9NR81 526 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 TMLHEQ9NVH6 421 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 RBAKQ9NYW8 714 aaPredicted RBP6.28□□□□□ -1.4
RNF4-217ENST00000511892 DLGAP2Q9P1A6 1054 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 SIX4Q9UIU6 781 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 AGAP1Q9UPQ3 857 aa6.28□□□□□ -1.4
RNF4-217ENST00000511892 MTF2Q9Y483 593 aaPredicted RBP6.28□□□□□ -1.4
RNF4-217ENST00000511892 OTOGLQ3ZCN5 2332 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms