RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 BTBD10Q9BSF8 475 aa9.58□□□□□ -0.88
SNF8-210ENST00000511214 TRIM55Q9BYV6 548 aa9.58□□□□□ -0.88
SNF8-210ENST00000511214 ACSS3Q9H6R3 686 aa9.58□□□□□ -0.88
SNF8-210ENST00000511214 TDRD3Q9H7E2 651 aaKnown RBP9.58□□□□□ -0.88
SNF8-210ENST00000511214 DBNDD1Q9H9R9 158 aa9.58□□□□□ -0.88
SNF8-210ENST00000511214 PDLIM7Q9NR12 457 aa9.58□□□□□ -0.88
SNF8-210ENST00000511214 TOPORSQ9NS56 1045 aaPredicted RBP9.58□□□□□ -0.88
SNF8-210ENST00000511214 GINM1Q9NU53 330 aa9.58□□□□□ -0.88
SNF8-210ENST00000511214 ARHGAP28Q9P2N2 729 aa9.58□□□□□ -0.88
SNF8-210ENST00000511214 DNPEPQ9ULA0 475 aa9.58□□□□□ -0.88
SNF8-210ENST00000511214 BCS1LQ9Y276 419 aa9.58□□□□□ -0.88
SNF8-210ENST00000511214 LRCH1Q9Y2L9 728 aa9.58□□□□□ -0.88
SNF8-210ENST00000511214 PCDHAC2Q9Y5I4 1007 aa9.58□□□□□ -0.88
SNF8-210ENST00000511214 SNCAIPQ9Y6H5 919 aa9.58□□□□□ -0.88
SNF8-210ENST00000511214 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.57□□□□□ -0.88
SNF8-210ENST00000511214 TCRBV5S1A1TA0A578 114 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 FOXO6A8MYZ6 492 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 POC1B-GALNT4F8VUJ3 575 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 HNRNPDLO14979 420 aaKnown RBP9.57□□□□□ -0.88
SNF8-210ENST00000511214 WDR46O15213 610 aaKnown RBP9.57□□□□□ -0.88
SNF8-210ENST00000511214 NVLO15381 856 aaKnown RBP9.57□□□□□ -0.88
SNF8-210ENST00000511214 DHRS4L1P0CG22 281 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 SKIP12755 728 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 CD58P19256 250 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 ATP4AP20648 1035 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 EPHB2P29323 1055 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 PIK3CAP42336 1068 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 PTDSS1P48651 473 aaKnown RBP9.57□□□□□ -0.88
SNF8-210ENST00000511214 CCNHP51946 323 aaPredicted RBP9.57□□□□□ -0.88
SNF8-210ENST00000511214 ZNF132P52740 706 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 MRPS9P82933 396 aaKnown RBP9.57□□□□□ -0.88
SNF8-210ENST00000511214 PDIA2Q13087 525 aaKnown RBP9.57□□□□□ -0.88
SNF8-210ENST00000511214 SPP2Q13103 211 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 GRM1Q13255 1194 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 HIF1AQ16665 826 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 UGCGQ16739 394 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 TFDP3Q5H9I0 405 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 WDR78Q5VTH9 848 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 SEPT14Q6ZU15 432 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 ZBED8Q8IZ13 594 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 ZNF276Q8N554 614 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 UBR7Q8N806 425 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 BANPQ8N9N5 519 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 SLC35B2Q8TB61 432 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 SYTL5Q8TDW5 730 aaPredicted RBP9.57□□□□□ -0.88
SNF8-210ENST00000511214 MZB1Q8WU39 189 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 ZFAND2BQ8WV99 257 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 ZNF516Q92618 1163 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 LPAR1Q92633 364 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 GPRASP2Q96D09 838 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 PTCD3Q96EY7 689 aaKnown RBP9.57□□□□□ -0.88
SNF8-210ENST00000511214 NSL1Q96IY1 281 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 ZNF333Q96JL9 665 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 TRAPPC9Q96Q05 1148 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 CGRRF1Q99675 332 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 MAK16Q9BXY0 300 aaKnown RBP9.57□□□□□ -0.88
SNF8-210ENST00000511214 DENND2DQ9H6A0 471 aaPredicted RBP9.57□□□□□ -0.88
SNF8-210ENST00000511214 SYNCQ9H7C4 482 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 SLCO1B3Q9NPD5 702 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 GPRC5CQ9NQ84 441 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 COL20A1Q9P218 1284 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 ZNF212Q9UDV6 495 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 DNAJB4Q9UDY4 337 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 RABGEF1Q9UJ41 708 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 USP21Q9UK80 565 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 GRID1Q9ULK0 1009 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 PCDHB4Q9Y5E5 795 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 PCDHA10Q9Y5I2 948 aa9.57□□□□□ -0.88
SNF8-210ENST00000511214 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.57□□□□□ -0.88
SNF8-210ENST00000511214 COL11A2P13942 1736 aaPredicted RBP9.56□□□□□ -0.88
SNF8-210ENST00000511214 IQANK1A0A1B0GTG1 560 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 F8W8V4 182 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 GSC2O15499 205 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 MAGEC1O60732 1142 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 GM2AP17900 193 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 KRT4P19013 534 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 CDH5P33151 784 aaPredicted RBP9.56□□□□□ -0.88
SNF8-210ENST00000511214 CDKN2BP42772 138 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 RAP1GDS1P52306 607 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 ARFIP2P53365 341 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 GPX6P59796 221 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 CDK16Q00536 496 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 MAP3K10Q02779 954 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 SLC18A2Q05940 514 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 SLC34A1Q06495 639 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 PGM5Q15124 567 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 TBCCQ15814 346 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 TAZQ16635 292 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 GSTA3Q16772 222 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 TDRD10Q5VZ19 366 aaKnown RBP9.56□□□□□ -0.88
SNF8-210ENST00000511214 MFSD7Q6UXD7 560 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 BBS12Q6ZW61 710 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 NLRX1Q86UT6 975 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 MFN1Q8IWA4 741 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 THNSL1Q8IYQ7 743 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 KIRREL3Q8IZU9 778 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 C4orf33Q8N1A6 199 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 NAT8LQ8N9F0 302 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 TMEM35BQ8NCS4 154 aa9.56□□□□□ -0.88
SNF8-210ENST00000511214 PPFIBP2Q8ND30 876 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms