RNA–Protein interactions for RNA: ENST00000511175.1

SUB1-208, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 2

Gene SUB1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-208ENST00000511175 EBF3Q9H4W6 596 aa3.83□□□□□ -1.8
SUB1-208ENST00000511175 ARHGEF3Q9NR81 526 aa3.83□□□□□ -1.8
SUB1-208ENST00000511175 PDGFCQ9NRA1 345 aa3.83□□□□□ -1.8
SUB1-208ENST00000511175 SLC52A1Q9NWF4 448 aa3.83□□□□□ -1.8
SUB1-208ENST00000511175 TUBA8Q9NY65 449 aaPredicted RBP3.83□□□□□ -1.8
SUB1-208ENST00000511175 SPATA31A3Q5VYP0 1347 aa3.82□□□□□ -1.8
SUB1-208ENST00000511175 MYO1FO00160 1098 aa3.82□□□□□ -1.8
SUB1-208ENST00000511175 POLRMTO00411 1230 aaKnown RBP3.82□□□□□ -1.8
SUB1-208ENST00000511175 DNAJB5O75953 348 aa3.82□□□□□ -1.8
SUB1-208ENST00000511175 VIL1P09327 827 aaKnown RBP3.82□□□□□ -1.8
SUB1-208ENST00000511175 CCKARP32238 428 aa3.82□□□□□ -1.8
SUB1-208ENST00000511175 NDUFV1P49821 464 aa3.82□□□□□ -1.8
SUB1-208ENST00000511175 LAMB3Q13751 1172 aa3.82□□□□□ -1.8
SUB1-208ENST00000511175 CATSPERGQ6ZRH7 1159 aa3.82□□□□□ -1.8
SUB1-208ENST00000511175 KRT73Q86Y46 540 aa3.82□□□□□ -1.8
SUB1-208ENST00000511175 CERS3Q8IU89 383 aa3.82□□□□□ -1.8
SUB1-208ENST00000511175 CNGA4Q8IV77 575 aa3.82□□□□□ -1.8
SUB1-208ENST00000511175 SERHLQ9NQF3 203 aa3.82□□□□□ -1.8
SUB1-208ENST00000511175 TDP1Q9NUW8 608 aa3.82□□□□□ -1.8
SUB1-208ENST00000511175 DDX56Q9NY93 547 aaKnown RBP3.82□□□□□ -1.8
SUB1-208ENST00000511175 GPR45Q9Y5Y3 372 aa3.82□□□□□ -1.8
SUB1-208ENST00000511175 CYSRT1A8MQ03 144 aa3.81□□□□□ -1.8
SUB1-208ENST00000511175 H0YIZ8 118 aa3.81□□□□□ -1.8
SUB1-208ENST00000511175 ADAMTS3O15072 1205 aa3.81□□□□□ -1.8
SUB1-208ENST00000511175 TRIAP1O43715 76 aa3.81□□□□□ -1.8
SUB1-208ENST00000511175 AGXTP21549 392 aa3.81□□□□□ -1.8
SUB1-208ENST00000511175 GYS2P54840 703 aa3.81□□□□□ -1.8
SUB1-208ENST00000511175 DAZAP2Q15038 168 aaPredicted RBP3.81□□□□□ -1.8
SUB1-208ENST00000511175 Q4G0T1 1027 aa3.81□□□□□ -1.8
SUB1-208ENST00000511175 LHFPL2Q6ZUX7 228 aa3.81□□□□□ -1.8
SUB1-208ENST00000511175 SLC29A4Q7RTT9 530 aa3.81□□□□□ -1.8
SUB1-208ENST00000511175 CHSY1Q86X52 802 aa3.81□□□□□ -1.8
SUB1-208ENST00000511175 KLHDC4Q8TBB5 520 aa3.81□□□□□ -1.8
SUB1-208ENST00000511175 AHCYL2Q96HN2 611 aaKnown RBP3.81□□□□□ -1.8
SUB1-208ENST00000511175 C5orf34Q96MH7 638 aa3.81□□□□□ -1.8
SUB1-208ENST00000511175 OSBPL9Q96SU4 736 aa3.81□□□□□ -1.8
SUB1-208ENST00000511175 MACROD1Q9BQ69 325 aa3.81□□□□□ -1.8
SUB1-208ENST00000511175 TYW1Q9NV66 732 aaKnown RBP3.81□□□□□ -1.8
SUB1-208ENST00000511175 ETAA1Q9NY74 926 aa3.81□□□□□ -1.8
SUB1-208ENST00000511175 CHPF2Q9P2E5 772 aa3.81□□□□□ -1.8
SUB1-208ENST00000511175 AFG3L2Q9Y4W6 797 aa3.81□□□□□ -1.8
SUB1-208ENST00000511175 ARID4BQ4LE39 1312 aaPredicted RBP3.8□□□□□ -1.8
SUB1-208ENST00000511175 IGKV2D-30A0A075B6S6 120 aa3.8□□□□□ -1.8
SUB1-208ENST00000511175 CYP2D7A0A087X1C5 515 aa3.8□□□□□ -1.8
SUB1-208ENST00000511175 PRR23D1E9PI22 279 aaPredicted RBP3.8□□□□□ -1.8
SUB1-208ENST00000511175 PRKD3O94806 890 aa3.8□□□□□ -1.8
SUB1-208ENST00000511175 PRR23D2P0DMB1 279 aaPredicted RBP3.8□□□□□ -1.8
SUB1-208ENST00000511175 CHRM3P20309 590 aa3.8□□□□□ -1.8
SUB1-208ENST00000511175 WASP42768 502 aa3.8□□□□□ -1.8
SUB1-208ENST00000511175 MASP1P48740 699 aa3.8□□□□□ -1.8
SUB1-208ENST00000511175 TMPRSS15P98073 1019 aa3.8□□□□□ -1.8
SUB1-208ENST00000511175 CDC42EP1Q00587 391 aa3.8□□□□□ -1.8
SUB1-208ENST00000511175 STAT4Q14765 748 aa3.8□□□□□ -1.8
SUB1-208ENST00000511175 RBM20Q5T481 1227 aaKnown RBP3.8□□□□□ -1.8
SUB1-208ENST00000511175 PXDC1Q5TGL8 231 aa3.8□□□□□ -1.8
SUB1-208ENST00000511175 VPS53Q5VIR6 699 aa3.8□□□□□ -1.8
SUB1-208ENST00000511175 TAF2Q6P1X5 1199 aa3.8□□□□□ -1.8
SUB1-208ENST00000511175 IRF2BP2Q7Z5L9 587 aa3.8□□□□□ -1.8
SUB1-208ENST00000511175 GALNT16Q8N428 558 aa3.8□□□□□ -1.8
SUB1-208ENST00000511175 NRACQ8N912 160 aa3.8□□□□□ -1.8
SUB1-208ENST00000511175 TBC1D5Q92609 795 aa3.8□□□□□ -1.8
SUB1-208ENST00000511175 TMEM79Q9BSE2 394 aa3.8□□□□□ -1.8
SUB1-208ENST00000511175 SLKQ9H2G2 1235 aaPredicted RBP3.8□□□□□ -1.8
SUB1-208ENST00000511175 ZNF277Q9NRM2 450 aaPredicted RBP3.8□□□□□ -1.8
SUB1-208ENST00000511175 DLL3Q9NYJ7 618 aa3.8□□□□□ -1.8
SUB1-208ENST00000511175 PPM1DO15297 605 aa3.79□□□□□ -1.8
SUB1-208ENST00000511175 PDGFRBP09619 1106 aa3.79□□□□□ -1.8
SUB1-208ENST00000511175 CYP2C18P33260 490 aa3.79□□□□□ -1.8
SUB1-208ENST00000511175 MIDNQ504T8 468 aa3.79□□□□□ -1.8
SUB1-208ENST00000511175 AARS2Q5JTZ9 985 aaKnown RBP3.79□□□□□ -1.8
SUB1-208ENST00000511175 NAPRTQ6XQN6 538 aa3.79□□□□□ -1.8
SUB1-208ENST00000511175 MEPCEQ7L2J0 689 aaKnown RBP3.79□□□□□ -1.8
SUB1-208ENST00000511175 PNLDC1Q8NA58 520 aaKnown RBP3.79□□□□□ -1.8
SUB1-208ENST00000511175 C8orf58Q8NAV2 365 aa3.79□□□□□ -1.8
SUB1-208ENST00000511175 PSD4Q8NDX1 1056 aa3.79□□□□□ -1.8
SUB1-208ENST00000511175 FAM136AQ96C01 138 aa3.79□□□□□ -1.8
SUB1-208ENST00000511175 MRGPRX4Q96LA9 322 aa3.79□□□□□ -1.8
SUB1-208ENST00000511175 TRNAU1APQ9NX07 287 aaKnown RBP3.79□□□□□ -1.8
SUB1-208ENST00000511175 PLEKHD1A6NEE1 506 aa3.78□□□□□ -1.8
SUB1-208ENST00000511175 BRINP1O60477 761 aa3.78□□□□□ -1.8
SUB1-208ENST00000511175 VPS4BO75351 444 aa3.78□□□□□ -1.8
SUB1-208ENST00000511175 LIPAP38571 399 aa3.78□□□□□ -1.8
SUB1-208ENST00000511175 EEFSECP57772 596 aaKnown RBP3.78□□□□□ -1.8
SUB1-208ENST00000511175 PSMC1P62191 440 aaKnown RBP3.78□□□□□ -1.8
SUB1-208ENST00000511175 CYP4F2P78329 520 aa3.78□□□□□ -1.8
SUB1-208ENST00000511175 TLE1Q04724 770 aa3.78□□□□□ -1.8
SUB1-208ENST00000511175 IL10RAQ13651 578 aa3.78□□□□□ -1.8
SUB1-208ENST00000511175 TRIP6Q15654 476 aaKnown RBP3.78□□□□□ -1.8
SUB1-208ENST00000511175 PCID2Q5JVF3 399 aa3.78□□□□□ -1.8
SUB1-208ENST00000511175 ANKRD16Q6P6B7 361 aa3.78□□□□□ -1.8
SUB1-208ENST00000511175 MAVSQ7Z434 540 aa3.78□□□□□ -1.8
SUB1-208ENST00000511175 FAM109AQ8N4B1 249 aa3.78□□□□□ -1.8
SUB1-208ENST00000511175 NANOGP1Q8N7R0 232 aa3.78□□□□□ -1.8
SUB1-208ENST00000511175 COG1Q8WTW3 980 aa3.78□□□□□ -1.8
SUB1-208ENST00000511175 ATRIPQ8WXE1 791 aa3.78□□□□□ -1.8
SUB1-208ENST00000511175 ZC3H10Q96K80 434 aaKnown RBP3.78□□□□□ -1.8
SUB1-208ENST00000511175 DMRTA2Q96SC8 542 aa3.78□□□□□ -1.8
SUB1-208ENST00000511175 TUBD1Q9UJT1 453 aa3.78□□□□□ -1.8
SUB1-208ENST00000511175 RIPOR2Q9Y4F9 1068 aa3.78□□□□□ -1.8
SUB1-208ENST00000511175 LOC102724159A0A0B4J2E5 919 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms