RNA–Protein interactions for RNA: ENST00000510940.1

LETM1-204, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-204ENST00000510940 PCDHA11Q9Y5I1 949 aa14.34□□□□□ -0.11
LETM1-204ENST00000510940 ATP8B3O60423 1300 aa14.34□□□□□ -0.11
LETM1-204ENST00000510940 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.33□□□□□ -0.12
LETM1-204ENST00000510940 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.33□□□□□ -0.12
LETM1-204ENST00000510940 OR6C75A6NL08 312 aa14.33□□□□□ -0.12
LETM1-204ENST00000510940 B4GALT3O60512 393 aa14.33□□□□□ -0.12
LETM1-204ENST00000510940 LSM8O95777 96 aaKnown RBP14.33□□□□□ -0.12
LETM1-204ENST00000510940 RB1P06400 928 aa14.33□□□□□ -0.12
LETM1-204ENST00000510940 FGFR3P22607 806 aa14.33□□□□□ -0.12
LETM1-204ENST00000510940 EIF4A3P38919 411 aaKnown RBP14.33□□□□□ -0.12
LETM1-204ENST00000510940 SNX16P57768 344 aa14.33□□□□□ -0.12
LETM1-204ENST00000510940 SMARCB1Q12824 385 aa14.33□□□□□ -0.12
LETM1-204ENST00000510940 SHHQ15465 462 aa14.33□□□□□ -0.12
LETM1-204ENST00000510940 CNGA2Q16280 664 aa14.33□□□□□ -0.12
LETM1-204ENST00000510940 ZNF394Q53GI3 561 aa14.33□□□□□ -0.12
LETM1-204ENST00000510940 HGSNATQ68CP4 663 aa14.33□□□□□ -0.12
LETM1-204ENST00000510940 CD300LGQ6UXG3 332 aa14.33□□□□□ -0.12
LETM1-204ENST00000510940 DDX53Q86TM3 631 aaKnown RBP14.33□□□□□ -0.12
LETM1-204ENST00000510940 SLC47A2Q86VL8 602 aa14.33□□□□□ -0.12
LETM1-204ENST00000510940 DCP1BQ8IZD4 617 aaKnown RBP14.33□□□□□ -0.12
LETM1-204ENST00000510940 TMEM130Q8N3G9 435 aa14.33□□□□□ -0.12
LETM1-204ENST00000510940 SLC4A11Q8NBS3 891 aa14.33□□□□□ -0.12
LETM1-204ENST00000510940 KBTBD7Q8WVZ9 684 aa14.33□□□□□ -0.12
LETM1-204ENST00000510940 ZNF606Q8WXB4 792 aa14.33□□□□□ -0.12
LETM1-204ENST00000510940 ZNF518BQ9C0D4 1074 aa14.33□□□□□ -0.12
LETM1-204ENST00000510940 MIS12Q9H081 205 aa14.33□□□□□ -0.12
LETM1-204ENST00000510940 SEPT11Q9NVA2 429 aaKnown RBP14.33□□□□□ -0.12
LETM1-204ENST00000510940 ARHGAP20Q9P2F6 1191 aa14.33□□□□□ -0.12
LETM1-204ENST00000510940 HESX1Q9UBX0 185 aa14.33□□□□□ -0.12
LETM1-204ENST00000510940 MSRAQ9UJ68 235 aa14.33□□□□□ -0.12
LETM1-204ENST00000510940 EPN1Q9Y6I3 576 aaPredicted RBP14.33□□□□□ -0.12
LETM1-204ENST00000510940 EIF3CLB5ME19 914 aaKnown RBP14.32□□□□□ -0.12
LETM1-204ENST00000510940 ZSCAN12O43309 604 aa14.32□□□□□ -0.12
LETM1-204ENST00000510940 ITGB1P05556 798 aa14.32□□□□□ -0.12
LETM1-204ENST00000510940 PNMA6AP0CW24 399 aaPredicted RBP14.32□□□□□ -0.12
LETM1-204ENST00000510940 GZMAP12544 262 aa14.32□□□□□ -0.12
LETM1-204ENST00000510940 KIF11P52732 1056 aa14.32□□□□□ -0.12
LETM1-204ENST00000510940 CCZ1BP86790 482 aa14.32□□□□□ -0.12
LETM1-204ENST00000510940 CCZ1P86791 482 aaPredicted RBP14.32□□□□□ -0.12
LETM1-204ENST00000510940 PLCB3Q01970 1234 aa14.32□□□□□ -0.12
LETM1-204ENST00000510940 UBE3AQ05086 875 aa14.32□□□□□ -0.12
LETM1-204ENST00000510940 SLC18A3Q16572 532 aa14.32□□□□□ -0.12
LETM1-204ENST00000510940 LRIT3Q3SXY7 679 aa14.32□□□□□ -0.12
LETM1-204ENST00000510940 ZNF571Q7Z3V5 609 aaPredicted RBP14.32□□□□□ -0.12
LETM1-204ENST00000510940 TMCO2Q7Z6W1 182 aaPredicted RBP14.32□□□□□ -0.12
LETM1-204ENST00000510940 CEP57Q86XR8 500 aa14.32□□□□□ -0.12
LETM1-204ENST00000510940 TMEM139Q8IV31 216 aa14.32□□□□□ -0.12
LETM1-204ENST00000510940 B3GALNT2Q8NCR0 500 aa14.32□□□□□ -0.12
LETM1-204ENST00000510940 NOX5Q96PH1 765 aa14.32□□□□□ -0.12
LETM1-204ENST00000510940 EIF3CQ99613 913 aaKnown RBP14.32□□□□□ -0.12
LETM1-204ENST00000510940 CHP1Q99653 195 aa14.32□□□□□ -0.12
LETM1-204ENST00000510940 SYT15Q9BQS2 421 aa14.32□□□□□ -0.12
LETM1-204ENST00000510940 HERC2P3Q9BVR0 1158 aa14.32□□□□□ -0.12
LETM1-204ENST00000510940 ELOVL4Q9GZR5 314 aa14.32□□□□□ -0.12
LETM1-204ENST00000510940 PRO3102Q9H379 93 aa14.32□□□□□ -0.12
LETM1-204ENST00000510940 NOCTQ9UK39 431 aaKnown RBP14.32□□□□□ -0.12
LETM1-204ENST00000510940 PCDHGC3Q9UN70 934 aa14.32□□□□□ -0.12
LETM1-204ENST00000510940 COLQQ9Y215 455 aaPredicted RBP14.32□□□□□ -0.12
LETM1-204ENST00000510940 LZTS1Q9Y250 596 aa14.32□□□□□ -0.12
LETM1-204ENST00000510940 NT5C1B-RDH14C9J2C7 533 aa14.31□□□□□ -0.12
LETM1-204ENST00000510940 I3L4J1 428 aa14.31□□□□□ -0.12
LETM1-204ENST00000510940 NDUFA10O95299 355 aa14.31□□□□□ -0.12
LETM1-204ENST00000510940 SOD2P04179 222 aa14.31□□□□□ -0.12
LETM1-204ENST00000510940 URODP06132 367 aa14.31□□□□□ -0.12
LETM1-204ENST00000510940 PDGFRBP09619 1106 aa14.31□□□□□ -0.12
LETM1-204ENST00000510940 PTPN1P18031 435 aaKnown RBP14.31□□□□□ -0.12
LETM1-204ENST00000510940 BMPR1AP36894 532 aa14.31□□□□□ -0.12
LETM1-204ENST00000510940 NFE2Q16621 373 aaPredicted RBP14.31□□□□□ -0.12
LETM1-204ENST00000510940 CTXN3Q4LDR2 81 aa14.31□□□□□ -0.12
LETM1-204ENST00000510940 VARS2Q5ST30 1063 aaKnown RBP14.31□□□□□ -0.12
LETM1-204ENST00000510940 C9orf50Q5SZB4 431 aa14.31□□□□□ -0.12
LETM1-204ENST00000510940 E4F1Q66K89 784 aaPredicted RBP14.31□□□□□ -0.12
LETM1-204ENST00000510940 ARHGAP17Q68EM7 881 aa14.31□□□□□ -0.12
LETM1-204ENST00000510940 GPR153Q6NV75 609 aa14.31□□□□□ -0.12
LETM1-204ENST00000510940 LCLAT1Q6UWP7 414 aa14.31□□□□□ -0.12
LETM1-204ENST00000510940 C4orf50Q6ZRC1 276 aa14.31□□□□□ -0.12
LETM1-204ENST00000510940 ACOT1Q86TX2 421 aa14.31□□□□□ -0.12
LETM1-204ENST00000510940 NOP9Q86U38 636 aaKnown RBP14.31□□□□□ -0.12
LETM1-204ENST00000510940 TMEM35BQ8NCS4 154 aa14.31□□□□□ -0.12
LETM1-204ENST00000510940 WHAMMQ8TF30 809 aa14.31□□□□□ -0.12
LETM1-204ENST00000510940 CYFIP2Q96F07 1278 aa14.31□□□□□ -0.12
LETM1-204ENST00000510940 TRIM11Q96F44 468 aa14.31□□□□□ -0.12
LETM1-204ENST00000510940 C11orf84Q9BUA3 381 aaPredicted RBP14.31□□□□□ -0.12
LETM1-204ENST00000510940 GPR62Q9BZJ7 368 aa14.31□□□□□ -0.12
LETM1-204ENST00000510940 LHX5Q9H2C1 402 aa14.31□□□□□ -0.12
LETM1-204ENST00000510940 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.31□□□□□ -0.12
LETM1-204ENST00000510940 ADAMTS1Q9UHI8 967 aa14.31□□□□□ -0.12
LETM1-204ENST00000510940 MYH10P35580 1976 aa14.31□□□□□ -0.12
LETM1-204ENST00000510940 SOWAHDA6NJG2 315 aa14.3□□□□□ -0.12
LETM1-204ENST00000510940 RBAK-RBAKDNI3L0D1 243 aa14.3□□□□□ -0.12
LETM1-204ENST00000510940 LPXNO60711 386 aa14.3□□□□□ -0.12
LETM1-204ENST00000510940 FGF18O76093 207 aa14.3□□□□□ -0.12
LETM1-204ENST00000510940 LCA5LO95447 670 aa14.3□□□□□ -0.12
LETM1-204ENST00000510940 CCDC175P0C221 793 aa14.3□□□□□ -0.12
LETM1-204ENST00000510940 SETSIPP0DME0 302 aa14.3□□□□□ -0.12
LETM1-204ENST00000510940 BRD2P25440 801 aaKnown RBP14.3□□□□□ -0.12
LETM1-204ENST00000510940 TKTP29401 623 aaKnown RBP14.3□□□□□ -0.12
LETM1-204ENST00000510940 CTNNB1P35222 781 aa14.3□□□□□ -0.12
LETM1-204ENST00000510940 GLUD2P49448 558 aa14.3□□□□□ -0.12
LETM1-204ENST00000510940 MRPL58Q14197 206 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms