RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 LNX1Q8TBB1 728 aaPredicted RBP9.38□□□□□ -0.91
PDPN-209ENST00000510906 LARP4BQ92615 738 aaKnown RBP9.38□□□□□ -0.91
PDPN-209ENST00000510906 SNX21Q969T3 373 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 CCDC74AQ96AQ1 378 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 C18orf25Q96B23 403 aaPredicted RBP9.38□□□□□ -0.91
PDPN-209ENST00000510906 ZNF707Q96C28 371 aaPredicted RBP9.38□□□□□ -0.91
PDPN-209ENST00000510906 BICD1Q96G01 975 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 UROC1Q96N76 676 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 FIZ1Q96SL8 496 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 CLSTN3Q9BQT9 956 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 NUCKS1Q9H1E3 243 aaKnown RBP9.38□□□□□ -0.91
PDPN-209ENST00000510906 ZHX3Q9H4I2 956 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 PARVGQ9HBI0 331 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 ABI2Q9NYB9 513 aaPredicted RBP9.38□□□□□ -0.91
PDPN-209ENST00000510906 CNTN3Q9P232 1028 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 HCN2Q9UL51 889 aa9.38□□□□□ -0.91
PDPN-209ENST00000510906 ANKRD11Q6UB99 2663 aaPredicted RBP9.38□□□□□ -0.91
PDPN-209ENST00000510906 TECTAO75443 2155 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 ATRXP46100 2492 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 TMEM221A6NGB7 291 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 H0YCG3 227 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 M0R296 226 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 PODXLO00592 558 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 CLDN3O15551 220 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 PHACTR2O75167 634 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 TBCAO75347 108 aaKnown RBP9.37□□□□□ -0.91
PDPN-209ENST00000510906 ASGR2P07307 311 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 CXCL8P10145 99 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 KCNE1P15382 129 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 FGFR3P22607 806 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 NMT1P30419 496 aaKnown RBP9.37□□□□□ -0.91
PDPN-209ENST00000510906 DDIT3P35638 169 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 TNFSF9P41273 254 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 MATR3P43243 847 aaKnown RBP eCLIP9.37□□□□□ -0.91
PDPN-209ENST00000510906 CREMQ03060 361 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 TNP2Q05952 138 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 ELAVL2Q12926 359 aaKnown RBP9.37□□□□□ -0.91
PDPN-209ENST00000510906 SLC39A14Q15043 492 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 SLC10A6Q3KNW5 377 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 ZBTB41Q5SVQ8 909 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.37□□□□□ -0.91
PDPN-209ENST00000510906 DYMQ7RTS9 669 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 KREMEN2Q8NCW0 462 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 SMG7Q92540 1137 aaKnown RBP9.37□□□□□ -0.91
PDPN-209ENST00000510906 KCNN1Q92952 543 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 SMOC2Q9H3U7 446 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 PLEKHA4Q9H4M7 779 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 SLC38A7Q9NVC3 462 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 TBX20Q9UMR3 447 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 AK5Q9Y6K8 562 aa9.37□□□□□ -0.91
PDPN-209ENST00000510906 A0A087X0B3 334 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 MYMKA6NI61 221 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 SCAMP3O14828 347 aaKnown RBP9.36□□□□□ -0.91
PDPN-209ENST00000510906 HNRNPDLO14979 420 aaKnown RBP9.36□□□□□ -0.91
PDPN-209ENST00000510906 N4BP1O75113 896 aaKnown RBP9.36□□□□□ -0.91
PDPN-209ENST00000510906 KRT37O76014 449 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 PIGRP01833 764 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 CLTAP09496 248 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 TKTP29401 623 aaKnown RBP9.36□□□□□ -0.91
PDPN-209ENST00000510906 OR1D2P34982 312 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 NASPP49321 788 aaPredicted RBP9.36□□□□□ -0.91
PDPN-209ENST00000510906 LIG4P49917 911 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 SPAG1Q07617 926 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 SIGLEC14Q08ET2 396 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 SFSWAPQ12872 951 aaKnown RBP9.36□□□□□ -0.91
PDPN-209ENST00000510906 ZC2HC1CQ53FD0 456 aaPredicted RBP9.36□□□□□ -0.91
PDPN-209ENST00000510906 RRAGBQ5VZM2 374 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 SLC39A4Q6P5W5 647 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 ELMSAN1Q6PJG2 1045 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 RSPO2Q6UXX9 243 aaPredicted RBP9.36□□□□□ -0.91
PDPN-209ENST00000510906 SFR1Q86XK3 245 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 ZDHHC14Q8IZN3 488 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 HDAC7Q8WUI4 952 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 PANK2Q9BZ23 570 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 GSX2Q9BZM3 304 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 IKZF4Q9H2S9 585 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 ZSCAN16Q9H4T2 348 aaPredicted RBP9.36□□□□□ -0.91
PDPN-209ENST00000510906 CUEDC1Q9NWM3 386 aaPredicted RBP9.36□□□□□ -0.91
PDPN-209ENST00000510906 MTRRQ9UBK8 725 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 STK17AQ9UEE5 414 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 CCDC39Q9UFE4 941 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 TUBGCP4Q9UGJ1 667 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 DPP7Q9UHL4 492 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 FBXW11Q9UKB1 542 aa9.36□□□□□ -0.91
PDPN-209ENST00000510906 TDRD15B5MCY1 1934 aaKnown RBP9.36□□□□□ -0.91
PDPN-209ENST00000510906 DNAH14Q0VDD8 3507 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 CLUHO75153 1309 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 A0A0B4J269 797 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 TTC26A0AVF1 554 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 TISP43B9A030 160 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 ANKRD63C9JTQ0 380 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 TRAPPC3O43617 180 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 FAM189A1O60320 539 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 PAPLNO95428 1278 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 C1RP00736 705 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 C8AP07357 584 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 GTF2BQ00403 316 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 RAB33AQ14088 237 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 STK38Q15208 465 aa9.35□□□□□ -0.91
PDPN-209ENST00000510906 DBN1Q16643 649 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms