RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, human

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNF8-208	ENST00000510195	HSP90AA1	P07900	732 aa	Known RBP	28.7	■■■□□ 2.18
SNF8-208	ENST00000510195	GABRR2	P28476	465 aa		28.7	■■■□□ 2.18
SNF8-208	ENST00000510195	CDC25C	P30307	473 aa		28.7	■■■□□ 2.18
SNF8-208	ENST00000510195	NFE2	Q16621	373 aa	Predicted RBP	28.7	■■■□□ 2.18
SNF8-208	ENST00000510195	SHC4	Q6S5L8	630 aa		28.7	■■■□□ 2.18
SNF8-208	ENST00000510195	CSGALNACT2	Q8N6G5	542 aa		28.7	■■■□□ 2.18
SNF8-208	ENST00000510195	CXorf38	Q8TB03	319 aa		28.7	■■■□□ 2.18
SNF8-208	ENST00000510195	FAM200A	Q8TCP9	573 aa		28.7	■■■□□ 2.18
SNF8-208	ENST00000510195	MSANTD3	Q96H12	275 aa		28.7	■■■□□ 2.18
SNF8-208	ENST00000510195	ACBD6	Q9BR61	282 aa		28.7	■■■□□ 2.18
SNF8-208	ENST00000510195	PCIF1	Q9H4Z3	704 aa		28.7	■■■□□ 2.18
SNF8-208	ENST00000510195	KIAA1586	Q9HCI6	787 aa		28.7	■■■□□ 2.18
SNF8-208	ENST00000510195	PCDHB5	Q9Y5E4	795 aa		28.7	■■■□□ 2.18
SNF8-208	ENST00000510195	FANCM	Q8IYD8	2048 aa		28.7	■■■□□ 2.18
SNF8-208	ENST00000510195	GVINP1	Q7Z2Y8	2422 aa		28.7	■■■□□ 2.18
SNF8-208	ENST00000510195	GOLGA8IP	A6NC78	632 aa		28.69	■■■□□ 2.18
SNF8-208	ENST00000510195	GOLGA8J	A6NMD2	632 aa		28.69	■■■□□ 2.18
SNF8-208	ENST00000510195	SOAT2	O75908	522 aa		28.69	■■■□□ 2.18
SNF8-208	ENST00000510195	ZSCAN22	P10073	491 aa	Predicted RBP	28.69	■■■□□ 2.18
SNF8-208	ENST00000510195	HAPLN1	P10915	354 aa	Predicted RBP	28.69	■■■□□ 2.18
SNF8-208	ENST00000510195	ATF6	P18850	670 aa		28.69	■■■□□ 2.18
SNF8-208	ENST00000510195	RBP5	P82980	135 aa		28.69	■■■□□ 2.18
SNF8-208	ENST00000510195	FZD5	Q13467	585 aa		28.69	■■■□□ 2.18
SNF8-208	ENST00000510195	ARID3B	Q8IVW6	561 aa	Predicted RBP	28.69	■■■□□ 2.18
SNF8-208	ENST00000510195	YAF2	Q8IY57	180 aa		28.69	■■■□□ 2.18
SNF8-208	ENST00000510195	ADSSL1	Q8N142	457 aa		28.69	■■■□□ 2.18
SNF8-208	ENST00000510195	DHX58	Q96C10	678 aa		28.69	■■■□□ 2.18
SNF8-208	ENST00000510195	C7orf25	Q9BPX7	421 aa		28.69	■■■□□ 2.18
SNF8-208	ENST00000510195	IER2	Q9BTL4	223 aa		28.69	■■■□□ 2.18
SNF8-208	ENST00000510195	MKNK1	Q9BUB5	465 aa		28.69	■■■□□ 2.18
SNF8-208	ENST00000510195	PDE11A	Q9HCR9	933 aa		28.69	■■■□□ 2.18
SNF8-208	ENST00000510195	COL4A3	Q01955	1670 aa		28.69	■■■□□ 2.18
SNF8-208	ENST00000510195	ZNF233	A6NK53	670 aa		28.68	■■■□□ 2.18
SNF8-208	ENST00000510195	ARNTL	O00327	626 aa		28.68	■■■□□ 2.18
SNF8-208	ENST00000510195	TMEM191B	P0C7N4	346 aa		28.68	■■■□□ 2.18
SNF8-208	ENST00000510195	SNRPF	P62306	86 aa	Known RBP	28.68	■■■□□ 2.18
SNF8-208	ENST00000510195	TAF12	Q16514	161 aa		28.68	■■■□□ 2.18
SNF8-208	ENST00000510195	MAMSTR	Q6ZN01	415 aa		28.68	■■■□□ 2.18
SNF8-208	ENST00000510195	ZNF687	Q8N1G0	1237 aa		28.68	■■■□□ 2.18
SNF8-208	ENST00000510195	PDCL2	Q8N4E4	241 aa		28.68	■■■□□ 2.18
SNF8-208	ENST00000510195	ZNF507	Q8TCN5	953 aa		28.68	■■■□□ 2.18
SNF8-208	ENST00000510195	LEO1	Q8WVC0	666 aa	Predicted RBP	28.68	■■■□□ 2.18
SNF8-208	ENST00000510195	ANKRD36BP1	Q96IX9	119 aa		28.68	■■■□□ 2.18
SNF8-208	ENST00000510195	GCNA	Q96QF7	691 aa		28.68	■■■□□ 2.18
SNF8-208	ENST00000510195	LPIN3	Q9BQK8	851 aa		28.68	■■■□□ 2.18
SNF8-208	ENST00000510195	TASP1	Q9H6P5	420 aa		28.68	■■■□□ 2.18
SNF8-208	ENST00000510195	R3HCC1	Q9Y3T6	440 aa	Known RBP	28.68	■■■□□ 2.18
SNF8-208	ENST00000510195		R4GN57	208 aa		28.68	■■■□□ 2.18
SNF8-208	ENST00000510195	ZNF292	O60281	2723 aa		28.68	■■■□□ 2.18
SNF8-208	ENST00000510195	F13A1	P00488	732 aa		28.67	■■■□□ 2.18
SNF8-208	ENST00000510195	ASIC1	P78348	528 aa		28.67	■■■□□ 2.18
SNF8-208	ENST00000510195	GPR158	Q5T848	1215 aa		28.67	■■■□□ 2.18
SNF8-208	ENST00000510195	EPM2AIP1	Q7L775	607 aa	Predicted RBP	28.67	■■■□□ 2.18
SNF8-208	ENST00000510195	DPH6	Q7L8W6	267 aa		28.67	■■■□□ 2.18
SNF8-208	ENST00000510195	TOP6BL	Q8N6T0	577 aa		28.67	■■■□□ 2.18
SNF8-208	ENST00000510195	ABCB6	Q9NP58	842 aa		28.67	■■■□□ 2.18
SNF8-208	ENST00000510195	INTS13	Q9NVM9	706 aa		28.67	■■■□□ 2.18
SNF8-208	ENST00000510195	ABI2	Q9NYB9	513 aa	Predicted RBP	28.67	■■■□□ 2.18
SNF8-208	ENST00000510195	L1RE1	Q9UN81	338 aa		28.67	■■■□□ 2.18
SNF8-208	ENST00000510195	PIAS3	Q9Y6X2	628 aa		28.67	■■■□□ 2.18
SNF8-208	ENST00000510195	EP300	Q09472	2414 aa	Predicted RBP	28.67	■■■□□ 2.18
SNF8-208	ENST00000510195	PATJ	Q8NI35	1801 aa		28.66	■■■□□ 2.18
SNF8-208	ENST00000510195	COL4A2	P08572	1712 aa		28.66	■■■□□ 2.18
SNF8-208	ENST00000510195	SOBP	A7XYQ1	873 aa		28.66	■■■□□ 2.18
SNF8-208	ENST00000510195	DPYSL4	O14531	572 aa		28.66	■■■□□ 2.18
SNF8-208	ENST00000510195	LHX1	P48742	406 aa		28.66	■■■□□ 2.18
SNF8-208	ENST00000510195	MYL7	Q01449	175 aa		28.66	■■■□□ 2.18
SNF8-208	ENST00000510195	MYO1E	Q12965	1108 aa		28.66	■■■□□ 2.18
SNF8-208	ENST00000510195	STXBP5	Q5T5C0	1151 aa		28.66	■■■□□ 2.18
SNF8-208	ENST00000510195	CSGALNACT1	Q8TDX6	532 aa		28.66	■■■□□ 2.18
SNF8-208	ENST00000510195	FAM3C	Q92520	227 aa		28.66	■■■□□ 2.18
SNF8-208	ENST00000510195	C8orf33	Q9H7E9	229 aa	Predicted RBP	28.66	■■■□□ 2.18
SNF8-208	ENST00000510195	IL21	Q9HBE4	155 aa		28.66	■■■□□ 2.18
SNF8-208	ENST00000510195	CFAP45	Q9UL16	551 aa		28.66	■■■□□ 2.18
SNF8-208	ENST00000510195	UBE4B	O95155	1302 aa		28.66	■■■□□ 2.18
SNF8-208	ENST00000510195	FRYL	O94915	3013 aa		28.65	■■■□□ 2.18
SNF8-208	ENST00000510195	TULP1	O00294	542 aa	Predicted RBP	28.65	■■■□□ 2.18
SNF8-208	ENST00000510195	KRT19	P08727	400 aa		28.65	■■■□□ 2.18
SNF8-208	ENST00000510195	HOXD13	P35453	343 aa		28.65	■■■□□ 2.18
SNF8-208	ENST00000510195	DUOXA2	Q1HG44	320 aa		28.65	■■■□□ 2.18
SNF8-208	ENST00000510195	ARHGAP29	Q52LW3	1261 aa		28.65	■■■□□ 2.18
SNF8-208	ENST00000510195	FAM26F	Q5R3K3	315 aa		28.65	■■■□□ 2.18
SNF8-208	ENST00000510195	UNC13D	Q70J99	1090 aa		28.65	■■■□□ 2.18
SNF8-208	ENST00000510195	NOC3L	Q8WTT2	800 aa	Known RBP	28.65	■■■□□ 2.18
SNF8-208	ENST00000510195	RSPRY1	Q96DX4	576 aa		28.65	■■■□□ 2.18
SNF8-208	ENST00000510195	MTMR12	Q9C0I1	747 aa		28.65	■■■□□ 2.18
SNF8-208	ENST00000510195	DDX43	Q9NXZ2	648 aa	Known RBP	28.65	■■■□□ 2.18
SNF8-208	ENST00000510195	FAM13B	Q9NYF5	915 aa		28.65	■■■□□ 2.18
SNF8-208	ENST00000510195	HSPBP1	Q9NZL4	362 aa		28.65	■■■□□ 2.18
SNF8-208	ENST00000510195	SIX4	Q9UIU6	781 aa		28.65	■■■□□ 2.18
SNF8-208	ENST00000510195	PCDHGA2	Q9Y5H1	932 aa		28.65	■■■□□ 2.18
SNF8-208	ENST00000510195	SPTBN4	Q9H254	2564 aa		28.65	■■■□□ 2.18
SNF8-208	ENST00000510195	NUP210	Q8TEM1	1887 aa	Predicted RBP	28.65	■■■□□ 2.18
SNF8-208	ENST00000510195	NCAN	O14594	1321 aa		28.65	■■■□□ 2.18
SNF8-208	ENST00000510195	GABRD	O14764	452 aa		28.64	■■■□□ 2.18
SNF8-208	ENST00000510195	POLR2D	O15514	142 aa	Known RBP	28.64	■■■□□ 2.18
SNF8-208	ENST00000510195	BFSP1	Q12934	665 aa		28.64	■■■□□ 2.18
SNF8-208	ENST00000510195	INTS6L	Q5JSJ4	861 aa	Known RBP	28.64	■■■□□ 2.18
SNF8-208	ENST00000510195	GLIS3	Q8NEA6	775 aa		28.64	■■■□□ 2.18
SNF8-208	ENST00000510195	HPS3	Q969F9	1004 aa		28.64	■■■□□ 2.18

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms