RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 FIZ1Q96SL8 496 aa16.03■□□□□ 0.16
SMAD5-206ENST00000509962 ST6GALNAC4Q9H4F1 302 aa16.03■□□□□ 0.16
SMAD5-206ENST00000509962 ZMYM5Q9UJ78 669 aa16.03■□□□□ 0.16
SMAD5-206ENST00000509962 STYXL1Q9Y6J8 313 aa16.03■□□□□ 0.16
SMAD5-206ENST00000509962 KPNA7A9QM74 516 aa16.02■□□□□ 0.16
SMAD5-206ENST00000509962 LRP3O75074 770 aa16.02■□□□□ 0.16
SMAD5-206ENST00000509962 IL18RAPO95256 599 aa16.02■□□□□ 0.16
SMAD5-206ENST00000509962 PAPSS2O95340 614 aaPredicted RBP16.02■□□□□ 0.16
SMAD5-206ENST00000509962 HAPLN1P10915 354 aaPredicted RBP16.02■□□□□ 0.16
SMAD5-206ENST00000509962 ATF6P18850 670 aa16.02■□□□□ 0.16
SMAD5-206ENST00000509962 GRIN1Q05586 938 aa16.02■□□□□ 0.16
SMAD5-206ENST00000509962 SF3A1Q15459 793 aaKnown RBP16.02■□□□□ 0.16
SMAD5-206ENST00000509962 ITPRIPL2Q3MIP1 535 aa16.02■□□□□ 0.16
SMAD5-206ENST00000509962 SV2CQ496J9 727 aa16.02■□□□□ 0.16
SMAD5-206ENST00000509962 WSCD1Q658N2 575 aa16.02■□□□□ 0.16
SMAD5-206ENST00000509962 ZNF720Q7Z2F6 126 aa16.02■□□□□ 0.16
SMAD5-206ENST00000509962 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.02■□□□□ 0.16
SMAD5-206ENST00000509962 LRRTM3Q86VH5 581 aa16.02■□□□□ 0.16
SMAD5-206ENST00000509962 CMTM8Q8IZV2 173 aa16.02■□□□□ 0.16
SMAD5-206ENST00000509962 POMGNT1Q8WZA1 660 aa16.02■□□□□ 0.16
SMAD5-206ENST00000509962 SLC46A2Q9BY10 475 aa16.02■□□□□ 0.16
SMAD5-206ENST00000509962 CCSER1Q9C0I3 900 aa16.02■□□□□ 0.16
SMAD5-206ENST00000509962 UPF2Q9HAU5 1272 aaKnown RBP16.02■□□□□ 0.16
SMAD5-206ENST00000509962 GKN1Q9NS71 199 aa16.02■□□□□ 0.16
SMAD5-206ENST00000509962 CCDC39Q9UFE4 941 aa16.02■□□□□ 0.16
SMAD5-206ENST00000509962 TISP43B9A030 160 aa16.01■□□□□ 0.15
SMAD5-206ENST00000509962 K7ESF4 209 aa16.01■□□□□ 0.15
SMAD5-206ENST00000509962 PRAMEF12O95522 483 aa16.01■□□□□ 0.15
SMAD5-206ENST00000509962 AVPR1AP37288 418 aa16.01■□□□□ 0.15
SMAD5-206ENST00000509962 TNK2Q07912 1038 aa16.01■□□□□ 0.15
SMAD5-206ENST00000509962 DMWDQ09019 674 aa16.01■□□□□ 0.15
SMAD5-206ENST00000509962 Q6ZS52 159 aa16.01■□□□□ 0.15
SMAD5-206ENST00000509962 CEP68Q76N32 757 aa16.01■□□□□ 0.15
SMAD5-206ENST00000509962 DYMQ7RTS9 669 aa16.01■□□□□ 0.15
SMAD5-206ENST00000509962 NT5DC4Q86YG4 428 aa16.01■□□□□ 0.15
SMAD5-206ENST00000509962 SMG9Q9H0W8 520 aaKnown RBP16.01■□□□□ 0.15
SMAD5-206ENST00000509962 IL21Q9HBE4 155 aa16.01■□□□□ 0.15
SMAD5-206ENST00000509962 SEMA4GQ9NTN9 838 aa16.01■□□□□ 0.15
SMAD5-206ENST00000509962 ABI2Q9NYB9 513 aaPredicted RBP16.01■□□□□ 0.15
SMAD5-206ENST00000509962 PCDHB5Q9Y5E4 795 aa16.01■□□□□ 0.15
SMAD5-206ENST00000509962 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.01■□□□□ 0.15
SMAD5-206ENST00000509962 NUP210Q8TEM1 1887 aaPredicted RBP16.01■□□□□ 0.15
SMAD5-206ENST00000509962 SCN1AP35498 2009 aa16.01■□□□□ 0.15
SMAD5-206ENST00000509962 TCHHQ07283 1943 aa16■□□□□ 0.15
SMAD5-206ENST00000509962 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16■□□□□ 0.15
SMAD5-206ENST00000509962 CD2BP2O95400 341 aaKnown RBP16■□□□□ 0.15
SMAD5-206ENST00000509962 PNPLA4P41247 253 aa16■□□□□ 0.15
SMAD5-206ENST00000509962 TSPY1Q01534 308 aa16■□□□□ 0.15
SMAD5-206ENST00000509962 BFSP1Q12934 665 aa16■□□□□ 0.15
SMAD5-206ENST00000509962 SRSF5Q13243 272 aaKnown RBP16■□□□□ 0.15
SMAD5-206ENST00000509962 CCINQ13939 588 aa16■□□□□ 0.15
SMAD5-206ENST00000509962 CSRP2Q16527 193 aa16■□□□□ 0.15
SMAD5-206ENST00000509962 WDR44Q5JSH3 913 aa16■□□□□ 0.15
SMAD5-206ENST00000509962 CRELD2Q6UXH1 353 aaPredicted RBP16■□□□□ 0.15
SMAD5-206ENST00000509962 MAB21L3Q8N8X9 362 aa16■□□□□ 0.15
SMAD5-206ENST00000509962 NETO1Q8TDF5 533 aa16■□□□□ 0.15
SMAD5-206ENST00000509962 HVCN1Q96D96 273 aa16■□□□□ 0.15
SMAD5-206ENST00000509962 EPSTI1Q96J88 318 aa16■□□□□ 0.15
SMAD5-206ENST00000509962 MRPL44Q9H9J2 332 aaKnown RBP16■□□□□ 0.15
SMAD5-206ENST00000509962 EXOC7Q9UPT5 735 aa16■□□□□ 0.15
SMAD5-206ENST00000509962 FOXD2O60548 495 aaPredicted RBP15.99■□□□□ 0.15
SMAD5-206ENST00000509962 ATG13O75143 517 aa15.99■□□□□ 0.15
SMAD5-206ENST00000509962 PRPF40AO75400 957 aaKnown RBP15.99■□□□□ 0.15
SMAD5-206ENST00000509962 F11P03951 625 aa15.99■□□□□ 0.15
SMAD5-206ENST00000509962 DDX6P26196 483 aaKnown RBP eCLIP15.99■□□□□ 0.15
SMAD5-206ENST00000509962 ADSSP30520 456 aa15.99■□□□□ 0.15
SMAD5-206ENST00000509962 HOXA6P31267 233 aa15.99■□□□□ 0.15
SMAD5-206ENST00000509962 AMPD2Q01433 879 aa15.99■□□□□ 0.15
SMAD5-206ENST00000509962 GRSF1Q12849 480 aaKnown RBP eCLIP15.99■□□□□ 0.15
SMAD5-206ENST00000509962 RUNX3Q13761 415 aa15.99■□□□□ 0.15
SMAD5-206ENST00000509962 NFE2Q16621 373 aaPredicted RBP15.99■□□□□ 0.15
SMAD5-206ENST00000509962 CC2D1AQ6P1N0 951 aaPredicted RBP15.99■□□□□ 0.15
SMAD5-206ENST00000509962 SV2BQ7L1I2 683 aa15.99■□□□□ 0.15
SMAD5-206ENST00000509962 SFR1Q86XK3 245 aa15.99■□□□□ 0.15
SMAD5-206ENST00000509962 CACTINQ8WUQ7 758 aaKnown RBP15.99■□□□□ 0.15
SMAD5-206ENST00000509962 ZNF560Q96MR9 790 aa15.99■□□□□ 0.15
SMAD5-206ENST00000509962 ACCSQ96QU6 501 aa15.99■□□□□ 0.15
SMAD5-206ENST00000509962 IKZF4Q9H2S9 585 aa15.99■□□□□ 0.15
SMAD5-206ENST00000509962 TDP1Q9NUW8 608 aa15.99■□□□□ 0.15
SMAD5-206ENST00000509962 MAGED2Q9UNF1 606 aaPredicted RBP15.99■□□□□ 0.15
SMAD5-206ENST00000509962 AGAP1Q9UPQ3 857 aa15.99■□□□□ 0.15
SMAD5-206ENST00000509962 RALGAPA1Q6GYQ0 2036 aa15.99■□□□□ 0.15
SMAD5-206ENST00000509962 SOBPA7XYQ1 873 aa15.98■□□□□ 0.15
SMAD5-206ENST00000509962 HUS1O60921 280 aa15.98■□□□□ 0.15
SMAD5-206ENST00000509962 LDHAP00338 332 aaKnown RBP15.98■□□□□ 0.15
SMAD5-206ENST00000509962 CSH1P0DML2 217 aa15.98■□□□□ 0.15
SMAD5-206ENST00000509962 CSH2P0DML3 217 aa15.98■□□□□ 0.15
SMAD5-206ENST00000509962 NLRP12P59046 1061 aa15.98■□□□□ 0.15
SMAD5-206ENST00000509962 TFAMQ00059 246 aaKnown RBP15.98■□□□□ 0.15
SMAD5-206ENST00000509962 RRAGBQ5VZM2 374 aa15.98■□□□□ 0.15
SMAD5-206ENST00000509962 PRR23CQ6ZRP0 262 aa15.98■□□□□ 0.15
SMAD5-206ENST00000509962 USP49Q70CQ1 688 aa15.98■□□□□ 0.15
SMAD5-206ENST00000509962 WDR5BQ86VZ2 330 aa15.98■□□□□ 0.15
SMAD5-206ENST00000509962 EFCAB13Q8IY85 973 aa15.98■□□□□ 0.15
SMAD5-206ENST00000509962 MRPS31Q92665 395 aaKnown RBP15.98■□□□□ 0.15
SMAD5-206ENST00000509962 FAM83CQ9BQN1 747 aa15.98■□□□□ 0.15
SMAD5-206ENST00000509962 FAM213AQ9BRX8 229 aa15.98■□□□□ 0.15
SMAD5-206ENST00000509962 PI4K2AQ9BTU6 479 aa15.98■□□□□ 0.15
SMAD5-206ENST00000509962 EBF3Q9H4W6 596 aa15.98■□□□□ 0.15
SMAD5-206ENST00000509962 C2orf42Q9NWW7 574 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms