RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 ACBD6Q9BR61 282 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 TASP1Q9H6P5 420 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 C8orf33Q9H7E9 229 aaPredicted RBP13.61□□□□□ -0.23
KDM3B-206ENST00000509468 LMAN1LQ9HAT1 526 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 ZSCAN32Q9NX65 697 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 TFIP11Q9UBB9 837 aaKnown RBP13.61□□□□□ -0.23
KDM3B-206ENST00000509468 ITGA11Q9UKX5 1188 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 NDRG2Q9UN36 371 aaKnown RBP13.61□□□□□ -0.23
KDM3B-206ENST00000509468 PCDHB5Q9Y5E4 795 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 PIAS3Q9Y6X2 628 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 TSC2P49815 1807 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 VPS13AQ96RL7 3174 aa13.61□□□□□ -0.23
KDM3B-206ENST00000509468 COL4A3Q01955 1670 aa13.6□□□□□ -0.23
KDM3B-206ENST00000509468 A0A087X0B3 334 aa13.6□□□□□ -0.23
KDM3B-206ENST00000509468 ZNF233A6NK53 670 aa13.6□□□□□ -0.23
KDM3B-206ENST00000509468 SHISA7A6NL88 538 aa13.6□□□□□ -0.23
KDM3B-206ENST00000509468 SOAT2O75908 522 aa13.6□□□□□ -0.23
KDM3B-206ENST00000509468 PRPF6O94906 941 aaKnown RBP13.6□□□□□ -0.23
KDM3B-206ENST00000509468 ITGB3P05106 788 aa13.6□□□□□ -0.23
KDM3B-206ENST00000509468 PTPRZ1P23471 2315 aaPredicted RBP13.6□□□□□ -0.23
KDM3B-206ENST00000509468 POLR2BP30876 1174 aaKnown RBP13.6□□□□□ -0.23
KDM3B-206ENST00000509468 KPNA1P52294 538 aaPredicted RBP13.6□□□□□ -0.23
KDM3B-206ENST00000509468 MYL7Q01449 175 aa13.6□□□□□ -0.23
KDM3B-206ENST00000509468 ZNF687Q8N1G0 1237 aa13.6□□□□□ -0.23
KDM3B-206ENST00000509468 GPD1LQ8N335 351 aa13.6□□□□□ -0.23
KDM3B-206ENST00000509468 TTC9BQ8N6N2 239 aa13.6□□□□□ -0.23
KDM3B-206ENST00000509468 IQUBQ8NA54 791 aa13.6□□□□□ -0.23
KDM3B-206ENST00000509468 SPATA18Q8TC71 538 aa13.6□□□□□ -0.23
KDM3B-206ENST00000509468 NUP210Q8TEM1 1887 aaPredicted RBP13.6□□□□□ -0.23
KDM3B-206ENST00000509468 NOC3LQ8WTT2 800 aaKnown RBP13.6□□□□□ -0.23
KDM3B-206ENST00000509468 SNX21Q969T3 373 aa13.6□□□□□ -0.23
KDM3B-206ENST00000509468 PCIF1Q9H4Z3 704 aa13.6□□□□□ -0.23
KDM3B-206ENST00000509468 KIAA1586Q9HCI6 787 aa13.6□□□□□ -0.23
KDM3B-206ENST00000509468 KBTBD4Q9NVX7 518 aa13.6□□□□□ -0.23
KDM3B-206ENST00000509468 THG1LQ9NWX6 298 aaKnown RBP13.6□□□□□ -0.23
KDM3B-206ENST00000509468 GDAP2Q9NXN4 497 aa13.6□□□□□ -0.23
KDM3B-206ENST00000509468 DMDP11532 3685 aa13.6□□□□□ -0.23
KDM3B-206ENST00000509468 CFAP54Q96N23 3096 aa13.6□□□□□ -0.23
KDM3B-206ENST00000509468 DENND4CQ5VZ89 1909 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 GOLGA8IPA6NC78 632 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 GOLGA8JA6NMD2 632 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 ARNTLO00327 626 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 CUTAO60888 179 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 KRT19P08727 400 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 CCNE1P24864 410 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 DDX6P26196 483 aaKnown RBP eCLIP13.59□□□□□ -0.23
KDM3B-206ENST00000509468 LHX1P48742 406 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 RPL10AP62906 217 aaKnown RBP13.59□□□□□ -0.23
KDM3B-206ENST00000509468 PLCB2Q00722 1185 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 MYO1EQ12965 1108 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 MTAPQ13126 283 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 DUOXA2Q1HG44 320 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 DPH6Q7L8W6 267 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 RALGPS2Q86X27 583 aaPredicted RBP13.59□□□□□ -0.23
KDM3B-206ENST00000509468 GPIHBP1Q8IV16 184 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 PDCL2Q8N4E4 241 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 TOP6BLQ8N6T0 577 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 CELF5Q8N6W0 485 aaKnown RBP13.59□□□□□ -0.23
KDM3B-206ENST00000509468 C1orf127Q8N9H9 656 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 ZBTB44Q8NCP5 570 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 GIPC2Q8TF65 315 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 NELL1Q92832 810 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 SECISBP2LQ93073 1101 aaKnown RBP13.59□□□□□ -0.23
KDM3B-206ENST00000509468 HINFPQ9BQA5 517 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 LPIN3Q9BQK8 851 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 CBWD1Q9BRT8 395 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 MKNK1Q9BUB5 465 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 CHRDQ9H2X0 955 aa13.59□□□□□ -0.23
KDM3B-206ENST00000509468 DDX43Q9NXZ2 648 aaKnown RBP13.59□□□□□ -0.23
KDM3B-206ENST00000509468 ABI2Q9NYB9 513 aaPredicted RBP13.59□□□□□ -0.23
KDM3B-206ENST00000509468 ZNF638Q14966 1978 aaKnown RBP13.59□□□□□ -0.23
KDM3B-206ENST00000509468 PRPF40AO75400 957 aaKnown RBP13.58□□□□□ -0.24
KDM3B-206ENST00000509468 YEATS4O95619 227 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 TNNC2P02585 160 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 HSP90AA1P07900 732 aaKnown RBP13.58□□□□□ -0.24
KDM3B-206ENST00000509468 TMEM191BP0C7N4 346 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 CSH1P0DML2 217 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 CSH2P0DML3 217 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 CHRNB1P11230 501 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 ATF6P18850 670 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 ID4P47928 161 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 CCR3P51677 355 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 SNRPFP62306 86 aaKnown RBP13.58□□□□□ -0.24
KDM3B-206ENST00000509468 BFSP1Q12934 665 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 LRRC32Q14392 662 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 DGKKQ5KSL6 1271 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 STXBP5Q5T5C0 1151 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 CNNM4Q6P4Q7 775 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 GPR161Q8N6U8 529 aaKnown RBP13.58□□□□□ -0.24
KDM3B-206ENST00000509468 SUMF1Q8NBK3 374 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 ZSWIM2Q8NEG5 633 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 ZNF507Q8TCN5 953 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 BPIFB1Q8TDL5 484 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 LEO1Q8WVC0 666 aaPredicted RBP13.58□□□□□ -0.24
KDM3B-206ENST00000509468 RSPRY1Q96DX4 576 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 ANKRD36BP1Q96IX9 119 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 SLC46A2Q9BY10 475 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 IL21Q9HBE4 155 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 PDE11AQ9HCR9 933 aa13.58□□□□□ -0.24
KDM3B-206ENST00000509468 ABCB6Q9NP58 842 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms