RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 NANOS3P60323 173 aaKnown RBP4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 GUCY1A3Q02108 690 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 PAK1Q13153 545 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 BECN1Q14457 450 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 PDCD1Q15116 288 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 PFKFB4Q16877 469 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 FAM110CQ1W6H9 321 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 ARL13BQ3SXY8 428 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 ISM2Q6H9L7 571 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 USP45Q70EL2 814 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 EPHX4Q8IUS5 362 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 THEMISQ8N1K5 641 aaPredicted RBP4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 D2HGDHQ8N465 521 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 ATG16L2Q8NAA4 619 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 RSAD2Q8WXG1 361 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 CFHR4Q92496 578 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 HTRA1Q92743 480 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 ERCC4Q92889 916 aaPredicted RBP4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 TSGA13Q96PP4 275 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 JMJD4Q9H9V9 463 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 TRPV4Q9HBA0 871 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 CYP4F11Q9HBI6 524 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 DIAPH3Q9NSV4 1193 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 PIH1D1Q9NWS0 290 aaKnown RBP4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 OXSMQ9NWU1 459 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 MTRRQ9UBK8 725 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 DENND2AQ9ULE3 1009 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 SRPK3Q9UPE1 567 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 COQ6Q9Y2Z9 468 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 ATP6V0A2Q9Y487 856 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 PCDHA8Q9Y5H6 950 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 IKBKGQ9Y6K9 419 aa4.81□□□□□ -1.64
SMARCA5-202ENST00000508573 POM121BA6NF01 834 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 CAPN8A6NHC0 703 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 IRAK2O43187 625 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 MGEA5O60502 916 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 SKAP2O75563 359 aaPredicted RBP4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 TGDSO95455 350 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 MT-ND3P03897 115 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 THP07101 528 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 PARP1P09874 1014 aaKnown RBP4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 SRGAP2CP0DJJ0 459 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 TSHRP16473 764 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 DESP17661 470 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 CASQ1P31415 396 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 HOXD13P35453 343 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 TNNT2P45379 298 aaPredicted RBP4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 RCAN1P53805 252 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 CD83Q01151 205 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 PMS2P11Q13670 270 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 EIF4HQ15056 248 aaKnown RBP4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 MPEG1Q2M385 716 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 ZACNQ401N2 412 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 ANO6Q4KMQ2 910 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 KAZNQ674X7 775 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 SLC30A6Q6NXT4 461 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 BTN2A1Q7KYR7 527 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 DNAJB7Q7Z6W7 309 aaPredicted RBP4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 MTDHQ86UE4 582 aaKnown RBP4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 LIX1LQ8IVB5 337 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 GPR135Q8IZ08 494 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 RNF152Q8N8N0 203 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 CHST14Q8NCH0 376 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 OR14K1Q8NGZ2 314 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 ZNF483Q8TF39 744 aaPredicted RBP4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 TGFBRAP1Q8WUH2 860 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 BRI3BPQ8WY22 251 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 RFFLQ8WZ73 363 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 FBXW5Q969U6 566 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 LTV1Q96GA3 475 aaPredicted RBP4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 SLC2A13Q96QE2 648 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 NELFAQ9H3P2 528 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 ZWILCHQ9H900 591 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 GRPEL1Q9HAV7 217 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 CABP5Q9NP86 173 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 SLC2A4RGQ9NR83 387 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 UCKL1Q9NWZ5 548 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 COMMD8Q9NX08 183 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 LRFN1Q9P244 771 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 GTF3C4Q9UKN8 822 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 ZHX1Q9UKY1 873 aaPredicted RBP4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 FAM184BQ9ULE4 1060 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 PADI4Q9UM07 663 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 SMC3Q9UQE7 1217 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 RRP7AQ9Y3A4 280 aaKnown RBP4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 PCDHGB5Q9Y5G0 923 aa4.8□□□□□ -1.64
SMARCA5-202ENST00000508573 PTPDC1A2A3K4 754 aa4.79□□□□□ -1.64
SMARCA5-202ENST00000508573 PRAMEF25A6NGN4 478 aa4.79□□□□□ -1.64
SMARCA5-202ENST00000508573 IPO5O00410 1097 aaKnown RBP4.79□□□□□ -1.64
SMARCA5-202ENST00000508573 ACKR2O00590 384 aa4.79□□□□□ -1.64
SMARCA5-202ENST00000508573 MAN2B1O00754 1011 aa4.79□□□□□ -1.64
SMARCA5-202ENST00000508573 KCNK3O14649 394 aa4.79□□□□□ -1.64
SMARCA5-202ENST00000508573 SLC7A4O43246 635 aa4.79□□□□□ -1.64
SMARCA5-202ENST00000508573 PPFIA2O75334 1257 aa4.79□□□□□ -1.64
SMARCA5-202ENST00000508573 SOAT2O75908 522 aa4.79□□□□□ -1.64
SMARCA5-202ENST00000508573 SGPL1O95470 568 aa4.79□□□□□ -1.64
SMARCA5-202ENST00000508573 STARD3NLO95772 234 aa4.79□□□□□ -1.64
SMARCA5-202ENST00000508573 AMY2AP04746 511 aa4.79□□□□□ -1.64
SMARCA5-202ENST00000508573 APPP05067 770 aa4.79□□□□□ -1.64
SMARCA5-202ENST00000508573 HARSP12081 509 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms