RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 TIMM13Q9Y5L4 95 aaPredicted RBP10.22□□□□□ -0.77
NEDD9-211ENST00000508546 TNRC6BQ9UPQ9 1833 aaKnown RBP10.21□□□□□ -0.77
NEDD9-211ENST00000508546 CEP192Q8TEP8 1941 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 PLXND1Q9Y4D7 1925 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 MYO18AQ92614 2054 aaKnown RBP10.21□□□□□ -0.77
NEDD9-211ENST00000508546 ASXL3Q9C0F0 2248 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 TTC26A0AVF1 554 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 LNP1A1A4G5 178 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 BCLAF3A2AJT9 711 aaKnown RBP10.21□□□□□ -0.77
NEDD9-211ENST00000508546 C1QL1O75973 258 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 RHOBTB1O94844 696 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 CYP3A5P20815 502 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 CDC25CP30307 473 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 CCT6AP40227 531 aaKnown RBP10.21□□□□□ -0.77
NEDD9-211ENST00000508546 FXR2P51116 673 aaKnown RBP eCLIP10.21□□□□□ -0.771e-18■□□□□ 8.2
NEDD9-211ENST00000508546 AMPD2Q01433 879 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 RUNX3Q13761 415 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 FBXO43Q4G163 708 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 OVOS1Q6IE37 1185 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 TTC9BQ8N6N2 239 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 NSUN7Q8NE18 718 aaKnown RBP10.21□□□□□ -0.77
NEDD9-211ENST00000508546 GTF3C6Q969F1 213 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 CHFRQ96EP1 664 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 DRC1Q96MC2 740 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 NTPCRQ9BSD7 190 aaKnown RBP10.21□□□□□ -0.77
NEDD9-211ENST00000508546 IL21Q9HBE4 155 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 HPS4Q9NQG7 708 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 EBF1Q9UH73 591 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 UBQLN1Q9UMX0 589 aaKnown RBP10.21□□□□□ -0.77
NEDD9-211ENST00000508546 KIAA1024Q9UPX6 916 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 SLC27A5Q9Y2P5 690 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 STK24Q9Y6E0 443 aa10.21□□□□□ -0.77
NEDD9-211ENST00000508546 CFAP46Q8IYW2 2715 aa10.21□□□□□ -0.78
NEDD9-211ENST00000508546 HELZP42694 1942 aaKnown RBP10.21□□□□□ -0.78
NEDD9-211ENST00000508546 XPOTO43592 962 aaKnown RBP10.2□□□□□ -0.78
NEDD9-211ENST00000508546 HIP1RO75146 1068 aa10.2□□□□□ -0.78
NEDD9-211ENST00000508546 RNF40O75150 1001 aa10.2□□□□□ -0.78
NEDD9-211ENST00000508546 LARGE1O95461 756 aa10.2□□□□□ -0.78
NEDD9-211ENST00000508546 CAVIN2O95810 425 aa10.2□□□□□ -0.78
NEDD9-211ENST00000508546 CXCL8P10145 99 aa10.2□□□□□ -0.78
NEDD9-211ENST00000508546 HARSP12081 509 aaKnown RBP10.2□□□□□ -0.78
NEDD9-211ENST00000508546 CEACAM1P13688 526 aa10.2□□□□□ -0.78
NEDD9-211ENST00000508546 CSRP1P21291 193 aaKnown RBP10.2□□□□□ -0.78
NEDD9-211ENST00000508546 DRD1P21728 446 aa10.2□□□□□ -0.78
NEDD9-211ENST00000508546 PAX3P23760 479 aa10.2□□□□□ -0.78
NEDD9-211ENST00000508546 TUFMP49411 452 aaKnown RBP10.2□□□□□ -0.78
NEDD9-211ENST00000508546 CREB5Q02930 508 aa10.2□□□□□ -0.78
NEDD9-211ENST00000508546 MCL1Q07820 350 aa10.2□□□□□ -0.78
NEDD9-211ENST00000508546 MAPK7Q13164 816 aa10.2□□□□□ -0.78
NEDD9-211ENST00000508546 PDIA5Q14554 519 aa10.2□□□□□ -0.78
NEDD9-211ENST00000508546 LARP1BQ659C4 914 aaKnown RBP10.2□□□□□ -0.78
NEDD9-211ENST00000508546 ARMCX5Q6P1M9 558 aa10.2□□□□□ -0.78
NEDD9-211ENST00000508546 ZPBP2Q6X784 338 aa10.2□□□□□ -0.78
NEDD9-211ENST00000508546 SYT13Q7L8C5 426 aa10.2□□□□□ -0.78
NEDD9-211ENST00000508546 CMTM8Q8IZV2 173 aa10.2□□□□□ -0.78
NEDD9-211ENST00000508546 NECAB1Q8N987 351 aa10.2□□□□□ -0.78
NEDD9-211ENST00000508546 DEFB124Q8NES8 71 aa10.2□□□□□ -0.78
NEDD9-211ENST00000508546 TSPAN18Q96SJ8 248 aa10.2□□□□□ -0.78
NEDD9-211ENST00000508546 SLC46A2Q9BY10 475 aa10.2□□□□□ -0.78
NEDD9-211ENST00000508546 IGSF5Q9NSI5 407 aa10.2□□□□□ -0.78
NEDD9-211ENST00000508546 DDX19AQ9NUU7 478 aaKnown RBP10.2□□□□□ -0.78
NEDD9-211ENST00000508546 KCNG1Q9UIX4 513 aa10.2□□□□□ -0.78
NEDD9-211ENST00000508546 SPTA1P02549 2419 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 OTOL1A6NHN0 477 aaPredicted RBP10.19□□□□□ -0.78
NEDD9-211ENST00000508546 SLC16A4O15374 487 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 CLDN3O15551 220 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 SOAT2O75908 522 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 APBB3O95704 486 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 EGFP01133 1207 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 CYP11A1P05108 521 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 CLTAP09496 248 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 PLA2G2AP14555 144 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 ATF6P18850 670 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 DDX6P26196 483 aaKnown RBP eCLIP10.19□□□□□ -0.781e-28■□□□□ 9.5
NEDD9-211ENST00000508546 LILRA4P59901 499 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 CYP4F8P98187 520 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 STRN3Q13033 797 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 VEPH1Q14D04 833 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 SAFBQ15424 915 aaKnown RBP eCLIP10.19□□□□□ -0.781e-6■■■■□ 20.1
NEDD9-211ENST00000508546 ZNF174Q15697 407 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 ME3Q16798 604 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 SEZ6Q53EL9 994 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 DSTYKQ6XUX3 929 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 C1orf186Q6ZWK4 172 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 C11orf74Q86VG3 221 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 TMEM130Q8N3G9 435 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 SPIRE2Q8WWL2 714 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 EXOC4Q96A65 974 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 GCNAQ96QF7 691 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 HHIPQ96QV1 700 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 LPIN3Q9BQK8 851 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 TIPINQ9BVW5 301 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 EBF3Q9H4W6 596 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 KIF9Q9HAQ2 790 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 FBRSL1Q9HCM7 1045 aaKnown RBP10.19□□□□□ -0.78
NEDD9-211ENST00000508546 LRWD1Q9UFC0 647 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 TBX20Q9UMR3 447 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 DNM3Q9UQ16 869 aa10.19□□□□□ -0.78
NEDD9-211ENST00000508546 CDX4O14627 284 aaPredicted RBP10.18□□□□□ -0.78
NEDD9-211ENST00000508546 KHNYNO15037 678 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms