RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 SLC46A1Q96NT5 459 aa6.37□□□□□ -1.39
GYPA-205ENST00000508337 NT5C1BQ96P26 610 aa6.37□□□□□ -1.39
GYPA-205ENST00000508337 P2RX7Q99572 595 aaKnown RBP6.37□□□□□ -1.39
GYPA-205ENST00000508337 LRFN3Q9BTN0 628 aa6.37□□□□□ -1.39
GYPA-205ENST00000508337 PCGF6Q9BYE7 350 aa6.37□□□□□ -1.39
GYPA-205ENST00000508337 KCTD5Q9NXV2 234 aa6.37□□□□□ -1.39
GYPA-205ENST00000508337 ETAA1Q9NY74 926 aa6.37□□□□□ -1.39
GYPA-205ENST00000508337 AGAP1Q9UPQ3 857 aa6.37□□□□□ -1.39
GYPA-205ENST00000508337 PAXBP1Q9Y5B6 917 aa6.37□□□□□ -1.39
GYPA-205ENST00000508337 GCP02774 474 aa6.36□□□□□ -1.39
GYPA-205ENST00000508337 THP07101 528 aa6.36□□□□□ -1.39
GYPA-205ENST00000508337 EGR2P11161 476 aaPredicted RBP6.36□□□□□ -1.39
GYPA-205ENST00000508337 XRCC6P12956 609 aaKnown RBP eCLIP6.36□□□□□ -1.39
GYPA-205ENST00000508337 GCLCP48506 637 aaPredicted RBP6.36□□□□□ -1.39
GYPA-205ENST00000508337 AGFG1P52594 562 aaKnown RBP6.36□□□□□ -1.39
GYPA-205ENST00000508337 LOXL3P58215 753 aa6.36□□□□□ -1.39
GYPA-205ENST00000508337 KRT17Q04695 432 aa6.36□□□□□ -1.39
GYPA-205ENST00000508337 DPTQ07507 201 aa6.36□□□□□ -1.39
GYPA-205ENST00000508337 GRM3Q14832 879 aa6.36□□□□□ -1.39
GYPA-205ENST00000508337 IQCB1Q15051 598 aa6.36□□□□□ -1.39
GYPA-205ENST00000508337 Q6ZNX1 250 aa6.36□□□□□ -1.39
GYPA-205ENST00000508337 FAM9AQ8IZU1 332 aaPredicted RBP6.36□□□□□ -1.39
GYPA-205ENST00000508337 ACTRT2Q8TDY3 377 aa6.36□□□□□ -1.39
GYPA-205ENST00000508337 KBTBD7Q8WVZ9 684 aa6.36□□□□□ -1.39
GYPA-205ENST00000508337 LRTOMTQ8WZ04 291 aa6.36□□□□□ -1.39
GYPA-205ENST00000508337 SLC9A6Q92581 669 aa6.36□□□□□ -1.39
GYPA-205ENST00000508337 TTC17Q96AE7 1141 aa6.36□□□□□ -1.39
GYPA-205ENST00000508337 SUCLG2Q96I99 432 aa6.36□□□□□ -1.39
GYPA-205ENST00000508337 SORCS2Q96PQ0 1159 aa6.36□□□□□ -1.39
GYPA-205ENST00000508337 LRRC27Q9C0I9 530 aa6.36□□□□□ -1.39
GYPA-205ENST00000508337 HESX1Q9UBX0 185 aa6.36□□□□□ -1.39
GYPA-205ENST00000508337 DDX20Q9UHI6 824 aaKnown RBP6.36□□□□□ -1.39
GYPA-205ENST00000508337 SHOC2Q9UQ13 582 aa6.36□□□□□ -1.39
GYPA-205ENST00000508337 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.36□□□□□ -1.39
GYPA-205ENST00000508337 YY2O15391 372 aa6.35□□□□□ -1.39
GYPA-205ENST00000508337 EIF5BO60841 1220 aaKnown RBP6.35□□□□□ -1.39
GYPA-205ENST00000508337 ZFPL1O95159 310 aa6.35□□□□□ -1.39
GYPA-205ENST00000508337 MAP4K4O95819 1239 aaPredicted RBP6.35□□□□□ -1.39
GYPA-205ENST00000508337 SLPIP03973 132 aa6.35□□□□□ -1.39
GYPA-205ENST00000508337 NPR1P16066 1061 aa6.35□□□□□ -1.39
GYPA-205ENST00000508337 PPP3CBP16298 524 aa6.35□□□□□ -1.39
GYPA-205ENST00000508337 PXNP49023 591 aaPredicted RBP6.35□□□□□ -1.39
GYPA-205ENST00000508337 ITIH3Q06033 890 aa6.35□□□□□ -1.39
GYPA-205ENST00000508337 SLC13A2Q13183 592 aa6.35□□□□□ -1.39
GYPA-205ENST00000508337 GBX1Q14549 363 aa6.35□□□□□ -1.39
GYPA-205ENST00000508337 RBM20Q5T481 1227 aaKnown RBP6.35□□□□□ -1.39
GYPA-205ENST00000508337 LCE5AQ5TCM9 118 aa6.35□□□□□ -1.39
GYPA-205ENST00000508337 RNF220Q5VTB9 566 aa6.35□□□□□ -1.39
GYPA-205ENST00000508337 FAM156AQ8NDB6 213 aa6.35□□□□□ -1.39
GYPA-205ENST00000508337 SLC30A5Q8TAD4 765 aa6.35□□□□□ -1.39
GYPA-205ENST00000508337 ACTRT3Q9BYD9 372 aa6.35□□□□□ -1.39
GYPA-205ENST00000508337 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.35□□□□□ -1.39
GYPA-205ENST00000508337 PACSIN3Q9UKS6 424 aa6.35□□□□□ -1.39
GYPA-205ENST00000508337 MED16Q9Y2X0 877 aa6.35□□□□□ -1.39
GYPA-205ENST00000508337 GRID2IPA4D2P6 1211 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 GOLIM4O00461 696 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 TPP1O14773 563 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 KIF3BO15066 747 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 FOXN1O15353 648 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 ZBED1O96006 694 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 CHRM2P08172 466 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 ZKSCAN1P17029 563 aaPredicted RBP6.34□□□□□ -1.39
GYPA-205ENST00000508337 TGM1P22735 817 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 CXCR5P32302 372 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 UCP3P55916 312 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 POLD3Q15054 466 aaPredicted RBP6.34□□□□□ -1.39
GYPA-205ENST00000508337 TEDDM1Q5T9Z0 273 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 SFRP4Q6FHJ7 346 aaPredicted RBP6.34□□□□□ -1.39
GYPA-205ENST00000508337 TMEM108Q6UXF1 575 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 LDLRAD3Q86YD5 345 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 SLC15A4Q8N697 577 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 DNAJC5GQ8N7S2 189 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 POC1BQ8TC44 478 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 CHFRQ96EP1 664 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 KRTAP4-9Q9BYQ8 210 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 SMOC2Q9H3U7 446 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 ZNF287Q9HBT7 754 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 SACM1LQ9NTJ5 587 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 XPR1Q9UBH6 696 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 DKK2Q9UBU2 259 aa6.34□□□□□ -1.39
GYPA-205ENST00000508337 SPATA31A3Q5VYP0 1347 aa6.33□□□□□ -1.4
GYPA-205ENST00000508337 PRSS29PA6NIE9 313 aa6.33□□□□□ -1.4
GYPA-205ENST00000508337 BTN3A1O00481 513 aa6.33□□□□□ -1.4
GYPA-205ENST00000508337 ESRRBO95718 433 aa6.33□□□□□ -1.4
GYPA-205ENST00000508337 PEX2P28328 305 aa6.33□□□□□ -1.4
GYPA-205ENST00000508337 VIPR2P41587 438 aa6.33□□□□□ -1.4
GYPA-205ENST00000508337 SEC24CP53992 1094 aa6.33□□□□□ -1.4
GYPA-205ENST00000508337 NXPH1P58417 271 aa6.33□□□□□ -1.4
GYPA-205ENST00000508337 MGAT5BQ3V5L5 792 aa6.33□□□□□ -1.4
GYPA-205ENST00000508337 PPP1R32Q7Z5V6 425 aa6.33□□□□□ -1.4
GYPA-205ENST00000508337 DGKHQ86XP1 1220 aa6.33□□□□□ -1.4
GYPA-205ENST00000508337 KIAA0319LQ8IZA0 1049 aa6.33□□□□□ -1.4
GYPA-205ENST00000508337 LNX2Q8N448 690 aa6.33□□□□□ -1.4
GYPA-205ENST00000508337 IL31RAQ8NI17 732 aa6.33□□□□□ -1.4
GYPA-205ENST00000508337 MYCBPAPQ8TBZ2 947 aa6.33□□□□□ -1.4
GYPA-205ENST00000508337 FAM136AQ96C01 138 aa6.33□□□□□ -1.4
GYPA-205ENST00000508337 PGBD1Q96JS3 809 aa6.33□□□□□ -1.4
GYPA-205ENST00000508337 MRGPRX1Q96LB2 322 aa6.33□□□□□ -1.4
GYPA-205ENST00000508337 SPATA5L1Q9BVQ7 753 aa6.33□□□□□ -1.4
GYPA-205ENST00000508337 TRIM54Q9BYV2 358 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 172.7 ms