RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 THEM5Q8N1Q8 247 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 FIBCD1Q8N539 461 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 PHOSPHO2Q8TCD6 241 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 ZNF558Q96NG5 402 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 DPEP3Q9H4B8 488 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 MARCH5Q9NX47 278 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 TRMT1Q9NXH9 659 aaKnown RBP18.59■□□□□ 0.57
RNF4-209ENST00000507784 STXBP5LQ9Y2K9 1186 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 NME7Q9Y5B8 376 aa18.59■□□□□ 0.57
RNF4-209ENST00000507784 COL4A6Q14031 1691 aa18.58■□□□□ 0.57
RNF4-209ENST00000507784 CCDC175P0C221 793 aa18.58■□□□□ 0.56
RNF4-209ENST00000507784 LAG3P18627 525 aa18.58■□□□□ 0.56
RNF4-209ENST00000507784 FMO1Q01740 532 aa18.58■□□□□ 0.56
RNF4-209ENST00000507784 SGO2Q562F6 1265 aa18.58■□□□□ 0.56
RNF4-209ENST00000507784 FAM171A1Q5VUB5 890 aa18.58■□□□□ 0.56
RNF4-209ENST00000507784 KCNT2Q6UVM3 1135 aa18.58■□□□□ 0.56
RNF4-209ENST00000507784 C17orf53Q8N3J3 647 aaPredicted RBP18.58■□□□□ 0.56
RNF4-209ENST00000507784 TFAP2BQ92481 460 aa18.58■□□□□ 0.56
RNF4-209ENST00000507784 DDX1Q92499 740 aaKnown RBP18.58■□□□□ 0.56
RNF4-209ENST00000507784 PCDHB18PQ96TA0 734 aa18.58■□□□□ 0.56
RNF4-209ENST00000507784 LPIN3Q9BQK8 851 aa18.58■□□□□ 0.56
RNF4-209ENST00000507784 RC3H2Q9HBD1 1191 aaKnown RBP18.58■□□□□ 0.56
RNF4-209ENST00000507784 KIAA1257Q9ULG3 409 aa18.58■□□□□ 0.56
RNF4-209ENST00000507784 PPP2R2CQ9Y2T4 447 aa18.58■□□□□ 0.56
RNF4-209ENST00000507784 INSL6Q9Y581 213 aa18.58■□□□□ 0.56
RNF4-209ENST00000507784 PCDHA13Q9Y5I0 950 aa18.58■□□□□ 0.56
RNF4-209ENST00000507784 ADGRG1Q9Y653 693 aa18.58■□□□□ 0.56
RNF4-209ENST00000507784 ZSCAN12O43309 604 aa18.57■□□□□ 0.56
RNF4-209ENST00000507784 TLL1O43897 1013 aa18.57■□□□□ 0.56
RNF4-209ENST00000507784 CYP11A1P05108 521 aa18.57■□□□□ 0.56
RNF4-209ENST00000507784 TYMPP19971 482 aa18.57■□□□□ 0.56
RNF4-209ENST00000507784 TKTP29401 623 aaKnown RBP18.57■□□□□ 0.56
RNF4-209ENST00000507784 PSMC1P62191 440 aaKnown RBP18.57■□□□□ 0.56
RNF4-209ENST00000507784 HTRA4P83105 476 aaPredicted RBP18.57■□□□□ 0.56
RNF4-209ENST00000507784 ELAVL2Q12926 359 aaKnown RBP18.57■□□□□ 0.56
RNF4-209ENST00000507784 OVOS1Q6IE37 1185 aa18.57■□□□□ 0.56
RNF4-209ENST00000507784 FUT10Q6P4F1 479 aa18.57■□□□□ 0.56
RNF4-209ENST00000507784 ALKBH5Q6P6C2 394 aaKnown RBP18.57■□□□□ 0.56
RNF4-209ENST00000507784 PASD1Q8IV76 773 aa18.57■□□□□ 0.56
RNF4-209ENST00000507784 COLGALT1Q8NBJ5 622 aa18.57■□□□□ 0.56
RNF4-209ENST00000507784 SLC30A5Q8TAD4 765 aa18.57■□□□□ 0.56
RNF4-209ENST00000507784 KIAA1524Q8TCG1 905 aa18.57■□□□□ 0.56
RNF4-209ENST00000507784 TNIP3Q96KP6 325 aa18.57■□□□□ 0.56
RNF4-209ENST00000507784 RNPC3Q96LT9 517 aaKnown RBP18.57■□□□□ 0.56
RNF4-209ENST00000507784 RAD9AQ99638 391 aa18.57■□□□□ 0.56
RNF4-209ENST00000507784 SYT11Q9BT88 431 aa18.57■□□□□ 0.56
RNF4-209ENST00000507784 GPR62Q9BZJ7 368 aa18.57■□□□□ 0.56
RNF4-209ENST00000507784 LUC7LQ9NQ29 371 aaKnown RBP18.57■□□□□ 0.56
RNF4-209ENST00000507784 AAASQ9NRG9 546 aa18.57■□□□□ 0.56
RNF4-209ENST00000507784 FAM49BQ9NUQ9 324 aa18.57■□□□□ 0.56
RNF4-209ENST00000507784 TSC2P49815 1807 aa18.56■□□□□ 0.56
RNF4-209ENST00000507784 KIAA1671Q9BY89 1806 aa18.56■□□□□ 0.56
RNF4-209ENST00000507784 SF3B1O75533 1304 aaKnown RBP eCLIP18.56■□□□□ 0.562e-6■■■■■ 112
RNF4-209ENST00000507784 GABRDO14764 452 aa18.56■□□□□ 0.56
RNF4-209ENST00000507784 ZNF263O14978 683 aa18.56■□□□□ 0.56
RNF4-209ENST00000507784 CCP110O43303 1012 aa18.56■□□□□ 0.56
RNF4-209ENST00000507784 ATP2C2O75185 946 aa18.56■□□□□ 0.56
RNF4-209ENST00000507784 CFHP08603 1231 aa18.56■□□□□ 0.56
RNF4-209ENST00000507784 PTPN1P18031 435 aaKnown RBP18.56■□□□□ 0.56
RNF4-209ENST00000507784 YWHAHQ04917 246 aaPredicted RBP18.56■□□□□ 0.56
RNF4-209ENST00000507784 SHHQ15465 462 aa18.56■□□□□ 0.56
RNF4-209ENST00000507784 C9orf50Q5SZB4 431 aa18.56■□□□□ 0.56
RNF4-209ENST00000507784 CRYBG2Q8N1P7 616 aa18.56■□□□□ 0.56
RNF4-209ENST00000507784 C12orf29Q8N999 325 aa18.56■□□□□ 0.56
RNF4-209ENST00000507784 BCL7CQ8WUZ0 217 aaPredicted RBP18.56■□□□□ 0.56
RNF4-209ENST00000507784 CYFIP2Q96F07 1278 aa18.56■□□□□ 0.56
RNF4-209ENST00000507784 SYT15Q9BQS2 421 aa18.56■□□□□ 0.56
RNF4-209ENST00000507784 ZSWIM1Q9BR11 485 aa18.56■□□□□ 0.56
RNF4-209ENST00000507784 NAGPAQ9UK23 515 aa18.56■□□□□ 0.56
RNF4-209ENST00000507784 CDH9Q9ULB4 789 aa18.56■□□□□ 0.56
RNF4-209ENST00000507784 SYN3O14994 580 aa18.55■□□□□ 0.56
RNF4-209ENST00000507784 LCA5LO95447 670 aa18.55■□□□□ 0.56
RNF4-209ENST00000507784 PCSK1P29120 753 aa18.55■□□□□ 0.56
RNF4-209ENST00000507784 ADORA2BP29275 332 aa18.55■□□□□ 0.56
RNF4-209ENST00000507784 CNGA2Q16280 664 aa18.55■□□□□ 0.56
RNF4-209ENST00000507784 CLEC16AQ2KHT3 1053 aa18.55■□□□□ 0.56
RNF4-209ENST00000507784 GOLGA7BQ2TAP0 167 aa18.55■□□□□ 0.56
RNF4-209ENST00000507784 MDH1BQ5I0G3 518 aa18.55■□□□□ 0.56
RNF4-209ENST00000507784 DENND1BQ6P3S1 775 aa18.55■□□□□ 0.56
RNF4-209ENST00000507784 TRIM72Q6ZMU5 477 aa18.55■□□□□ 0.56
RNF4-209ENST00000507784 TMEM173Q86WV6 379 aaPredicted RBP18.55■□□□□ 0.56
RNF4-209ENST00000507784 DNAAF5Q86Y56 855 aa18.55■□□□□ 0.56
RNF4-209ENST00000507784 PALB2Q86YC2 1186 aa18.55■□□□□ 0.56
RNF4-209ENST00000507784 CCAR2Q8N163 923 aaKnown RBP18.55■□□□□ 0.56
RNF4-209ENST00000507784 SPATA18Q8TC71 538 aa18.55■□□□□ 0.56
RNF4-209ENST00000507784 TMEM169Q96HH4 297 aa18.55■□□□□ 0.56
RNF4-209ENST00000507784 IGSF21Q96ID5 467 aa18.55■□□□□ 0.56
RNF4-209ENST00000507784 MED10Q9BTT4 135 aa18.55■□□□□ 0.56
RNF4-209ENST00000507784 UBE2OQ9C0C9 1292 aaKnown RBP18.55■□□□□ 0.56
RNF4-209ENST00000507784 TAS2R14Q9NYV8 317 aa18.55■□□□□ 0.56
RNF4-209ENST00000507784 SPG21Q9NZD8 308 aa18.55■□□□□ 0.56
RNF4-209ENST00000507784 REXO2Q9Y3B8 237 aaKnown RBP18.55■□□□□ 0.56
RNF4-209ENST00000507784 CEP83Q9Y592 693 aa18.55■□□□□ 0.56
RNF4-209ENST00000507784 PCDHB12Q9Y5F1 795 aa18.55■□□□□ 0.56
RNF4-209ENST00000507784 CARNS1A5YM72 827 aa18.54■□□□□ 0.56
RNF4-209ENST00000507784 M0QYV0 167 aa18.54■□□□□ 0.56
RNF4-209ENST00000507784 RTN2O75298 545 aa18.54■□□□□ 0.56
RNF4-209ENST00000507784 MICAL2O94851 1124 aa18.54■□□□□ 0.56
RNF4-209ENST00000507784 CCDC130P13994 396 aa18.54■□□□□ 0.56
RNF4-209ENST00000507784 CDR1P51861 262 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms