RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 GDAQ9Y2T3 454 aa10.37□□□□□ -0.75
CLCN3-205ENST00000506924 ARL5CA6NH57 179 aa10.36□□□□□ -0.75
CLCN3-205ENST00000506924 F8W735 103 aaPredicted RBP10.36□□□□□ -0.75
CLCN3-205ENST00000506924 SCAMP3O14828 347 aaKnown RBP10.36□□□□□ -0.75
CLCN3-205ENST00000506924 GRM6O15303 877 aa10.36□□□□□ -0.75
CLCN3-205ENST00000506924 B4GALT3O60512 393 aa10.36□□□□□ -0.75
CLCN3-205ENST00000506924 ZC3H11AO75152 810 aaKnown RBP eCLIP10.36□□□□□ -0.75
CLCN3-205ENST00000506924 GSTP1P09211 210 aaKnown RBP10.36□□□□□ -0.75
CLCN3-205ENST00000506924 MATR3P43243 847 aaKnown RBP eCLIP10.36□□□□□ -0.75
CLCN3-205ENST00000506924 ASIC1P78348 528 aa10.36□□□□□ -0.75
CLCN3-205ENST00000506924 ZNF568Q3ZCX4 644 aa10.36□□□□□ -0.75
CLCN3-205ENST00000506924 SHISA2Q6UWI4 295 aa10.36□□□□□ -0.75
CLCN3-205ENST00000506924 FAM43BQ6ZT52 329 aaPredicted RBP10.36□□□□□ -0.75
CLCN3-205ENST00000506924 PDZD3Q86UT5 571 aa10.36□□□□□ -0.75
CLCN3-205ENST00000506924 CEP57L1Q8IYX8 460 aa10.36□□□□□ -0.75
CLCN3-205ENST00000506924 LRRC43Q8N309 656 aa10.36□□□□□ -0.75
CLCN3-205ENST00000506924 COLGALT1Q8NBJ5 622 aa10.36□□□□□ -0.75
CLCN3-205ENST00000506924 FIZ1Q96SL8 496 aa10.36□□□□□ -0.75
CLCN3-205ENST00000506924 ADPGKQ9BRR6 497 aa10.36□□□□□ -0.75
CLCN3-205ENST00000506924 RSRP1Q9BUV0 290 aa10.36□□□□□ -0.75
CLCN3-205ENST00000506924 TRIM9Q9C026 710 aa10.36□□□□□ -0.75
CLCN3-205ENST00000506924 TNMDQ9H2S6 317 aa10.36□□□□□ -0.75
CLCN3-205ENST00000506924 MRPL44Q9H9J2 332 aaKnown RBP10.36□□□□□ -0.75
CLCN3-205ENST00000506924 TBC1D13Q9NVG8 400 aa10.36□□□□□ -0.75
CLCN3-205ENST00000506924 KBTBD4Q9NVX7 518 aa10.36□□□□□ -0.75
CLCN3-205ENST00000506924 CHMP5Q9NZZ3 219 aa10.36□□□□□ -0.75
CLCN3-205ENST00000506924 DNAJB4Q9UDY4 337 aa10.36□□□□□ -0.75
CLCN3-205ENST00000506924 TBX20Q9UMR3 447 aa10.36□□□□□ -0.75
CLCN3-205ENST00000506924 TNFSF13BQ9Y275 285 aa10.36□□□□□ -0.75
CLCN3-205ENST00000506924 STXBP5LQ9Y2K9 1186 aa10.36□□□□□ -0.75
CLCN3-205ENST00000506924 TISP43B9A030 160 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 H3BNC9 293 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 DDX3YO15523 660 aaKnown RBP10.35□□□□□ -0.75
CLCN3-205ENST00000506924 FBXO24O75426 580 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 DDHD2O94830 711 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 GCNT3O95395 438 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 ITGB1P05556 798 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 CELA3AP09093 270 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 MYBP10242 640 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 BMP6P22004 513 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 DNAJB1P25685 340 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 MAOBP27338 520 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 SYKP43405 635 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 SCNN1GP51170 649 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 CASP5P51878 434 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 BCAR1P56945 870 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 ZNF252P-AS1Q0IIN9 211 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 COASYQ13057 564 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 CUL4BQ13620 913 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 TSNAXIP1Q2TAA8 658 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 EXOSC6Q5RKV6 272 aaKnown RBP10.35□□□□□ -0.75
CLCN3-205ENST00000506924 ACAD11Q709F0 780 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 CCDC65Q8IXS2 484 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 THNSL1Q8IYQ7 743 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 CNNM3Q8NE01 707 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 MAFAQ8NHW3 353 aaPredicted RBP10.35□□□□□ -0.75
CLCN3-205ENST00000506924 URGCPQ8TCY9 931 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 MRPS27Q92552 414 aaKnown RBP10.35□□□□□ -0.75
CLCN3-205ENST00000506924 RABGGTAQ92696 567 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 PAGE5Q96GU1 130 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 SAMD11Q96NU1 681 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 TMPRSS13Q9BYE2 586 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 HAPLN2Q9GZV7 340 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 CDT1Q9H211 546 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 CUEDC2Q9H467 287 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 NRDE2Q9H7Z3 1164 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 AKTIPQ9H8T0 292 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 CACNA2D2Q9NY47 1150 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 CACNG4Q9UBN1 327 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 KCNG1Q9UIX4 513 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 PLAGL2Q9UPG8 496 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 HPSEQ9Y251 543 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 PCDHB12Q9Y5F1 795 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 PCDHGC5Q9Y5F6 944 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 MTCH2Q9Y6C9 303 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 RALGAPA2Q2PPJ7 1873 aa10.35□□□□□ -0.75
CLCN3-205ENST00000506924 A0A1W2PQ27 194 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 A0A1W2PQ64 194 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 A0A1W2PQD8 194 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 GOLGA6L4A6NEF3 574 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 ANKRD63C9JTQ0 380 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 C5orf67F2Z3F1 127 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 H0YCG3 227 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 ABLIM1O14639 778 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 FGF18O76093 207 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 RECQL4O94761 1208 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 PRPF6O94906 941 aaKnown RBP10.34□□□□□ -0.75
CLCN3-205ENST00000506924 SLFN14P0C7P3 912 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 GAP43P17677 238 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 LAG3P18627 525 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 LIG4P49917 911 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 AMPD3Q01432 767 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 DCAF4L1Q3SXM0 396 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 KCNT2Q6UVM3 1135 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 MPZL3Q6UWV2 235 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 ZNF720Q7Z2F6 126 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 TMEM173Q86WV6 379 aaPredicted RBP10.34□□□□□ -0.75
CLCN3-205ENST00000506924 HACE1Q8IYU2 909 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 SPPL3Q8TCT6 385 aa10.34□□□□□ -0.75
CLCN3-205ENST00000506924 UBASH3BQ8TF42 649 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms