RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 TRIM27P14373 513 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 GATA3P23771 443 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 PEX2P28328 305 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 SLC7A1P30825 629 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 KCNJ5P48544 419 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 SLC11A2P49281 568 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 WNT3P56703 355 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 PURAQ00577 322 aaKnown RBP3.63□□□□□ -1.83
GYPB-207ENST00000506679 TAP1Q03518 808 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 PTPAQ15257 358 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 KIAA0753Q2KHM9 967 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 KIAA0895LQ68EN5 471 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 ZNF783Q6ZMS7 281 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 MICALCLQ6ZW33 695 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 LDLRAD3Q86YD5 345 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 FAM46DQ8NEK8 389 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 OR6B3Q8NGW1 331 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 SSH3Q8TE77 659 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 NMD3Q96D46 503 aaKnown RBP3.63□□□□□ -1.83
GYPB-207ENST00000506679 SUCLG2Q96I99 432 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 MSLNLQ96KJ4 702 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 OSBPL9Q96SU4 736 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 HEPHQ9BQS7 1158 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 LRRC27Q9C0I9 530 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 BTBD1Q9H0C5 482 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 PCED1AQ9H1Q7 454 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 SMOC2Q9H3U7 446 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 INTS13Q9NVM9 706 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 SRRDQ9UH36 339 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 TPCN1Q9ULQ1 816 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 PAXBP1Q9Y5B6 917 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 HS3ST3A1Q9Y663 406 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 MAST3O60307 1309 aa3.63□□□□□ -1.83
GYPB-207ENST00000506679 TRGV11A0A075B6L2 103 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 TRIM43BA6NCK2 446 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 BTN3A1O00481 513 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 TOR1BO14657 336 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 ITGAMP11215 1152 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 SLC5A1P13866 664 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 GDF5P43026 501 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 NPTX2P47972 431 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 ZNF134P52741 427 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 UCP3P55916 312 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 FMO1Q01740 532 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 KLF10Q13118 480 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 CTBP1Q13363 440 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 CNGA2Q16280 664 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 CD300EQ496F6 205 aaPredicted RBP3.62□□□□□ -1.83
GYPB-207ENST00000506679 CCSAPQ6IQ19 270 aaPredicted RBP3.62□□□□□ -1.83
GYPB-207ENST00000506679 SLC30A10Q6XR72 485 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 MICU3Q86XE3 530 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 VRK3Q8IV63 474 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 FAM9AQ8IZU1 332 aaPredicted RBP3.62□□□□□ -1.83
GYPB-207ENST00000506679 PCSK9Q8NBP7 692 aaKnown RBP3.62□□□□□ -1.83
GYPB-207ENST00000506679 SLC16A11Q8NCK7 471 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 NEU4Q8WWR8 484 aaPredicted RBP3.62□□□□□ -1.83
GYPB-207ENST00000506679 SNX19Q92543 992 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 TMEM125Q96AQ2 219 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 TRIM43Q96BQ3 446 aaPredicted RBP3.62□□□□□ -1.83
GYPB-207ENST00000506679 MESP1Q9BRJ9 268 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 TBCCD1Q9NVR7 557 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 KCTD5Q9NXV2 234 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 XPR1Q9UBH6 696 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 CPNE7Q9UBL6 633 aa3.62□□□□□ -1.83
GYPB-207ENST00000506679 EPN1Q9Y6I3 576 aaPredicted RBP3.62□□□□□ -1.83
GYPB-207ENST00000506679 FOXN1O15353 648 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 PRC1O43663 620 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 AKAP8O43823 692 aaKnown RBP3.61□□□□□ -1.83
GYPB-207ENST00000506679 MGEA5O60502 916 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 VPS4BO75351 444 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 SLPIP03973 132 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 ATXN1LP0C7T5 689 aaKnown RBP3.61□□□□□ -1.83
GYPB-207ENST00000506679 HKR1P10072 659 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 PHKG2P15735 406 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 TYRP1P17643 537 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 RPL17P18621 184 aaKnown RBP3.61□□□□□ -1.83
GYPB-207ENST00000506679 CHRM3P20309 590 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 GCLCP48506 637 aaPredicted RBP3.61□□□□□ -1.83
GYPB-207ENST00000506679 NDUFV1P49821 464 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 SEC24CP53992 1094 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 SUMO3P55854 103 aaPredicted RBP3.61□□□□□ -1.83
GYPB-207ENST00000506679 LOXL3P58215 753 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 FPGSQ05932 587 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 SLC13A2Q13183 592 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 LONRF3Q496Y0 759 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 AMOTQ4VCS5 1084 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 LMBRD2Q68DH5 695 aaPredicted RBP3.61□□□□□ -1.83
GYPB-207ENST00000506679 VWA1Q6PCB0 445 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 USP51Q70EK9 711 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 SESTD1Q86VW0 696 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 GAS2L3Q86XJ1 694 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 DNAJC5GQ8N7S2 189 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 BEND2Q8NDZ0 799 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 Q96MF0 132 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 SLC46A1Q96NT5 459 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 PCGF6Q9BYE7 350 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 KRTAP9-8Q9BYQ0 159 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 ZNF518BQ9C0D4 1074 aa3.61□□□□□ -1.83
GYPB-207ENST00000506679 TOR3AQ9H497 397 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms