RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 GABRR2P28476 465 aa15.5■□□□□ 0.07
CDC42SE2-209ENST00000506419 PNPLA4P41247 253 aa15.5■□□□□ 0.07
CDC42SE2-209ENST00000506419 GPR15P49685 360 aa15.5■□□□□ 0.07
CDC42SE2-209ENST00000506419 RBP5P82980 135 aa15.5■□□□□ 0.07
CDC42SE2-209ENST00000506419 AMPD3Q01432 767 aa15.5■□□□□ 0.07
CDC42SE2-209ENST00000506419 DNM1Q05193 864 aaKnown RBP15.5■□□□□ 0.07
CDC42SE2-209ENST00000506419 RESP18Q5W5W9 173 aa15.5■□□□□ 0.07
CDC42SE2-209ENST00000506419 ZNF852Q6ZMS4 543 aa15.5■□□□□ 0.07
CDC42SE2-209ENST00000506419 SCFD1Q8WVM8 642 aa15.5■□□□□ 0.07
CDC42SE2-209ENST00000506419 DNASE1L2Q92874 299 aa15.5■□□□□ 0.07
CDC42SE2-209ENST00000506419 CHAMP1Q96JM3 812 aa15.5■□□□□ 0.07
CDC42SE2-209ENST00000506419 MTMR12Q9C0I1 747 aa15.5■□□□□ 0.07
CDC42SE2-209ENST00000506419 TRPV5Q9NQA5 729 aa15.5■□□□□ 0.07
CDC42SE2-209ENST00000506419 INTS13Q9NVM9 706 aa15.5■□□□□ 0.07
CDC42SE2-209ENST00000506419 GDAP2Q9NXN4 497 aa15.5■□□□□ 0.07
CDC42SE2-209ENST00000506419 HSPBP1Q9NZL4 362 aa15.5■□□□□ 0.07
CDC42SE2-209ENST00000506419 CACNA1IQ9P0X4 2223 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 MYH15Q9Y2K3 1946 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 ZNF233A6NK53 670 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 ZNF263O14978 683 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 CLIC2O15247 247 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 HMGA1P17096 107 aaKnown RBP15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 ACAT1P24752 427 aaKnown RBP15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 SMARCB1Q12824 385 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 BFSP1Q12934 665 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 CUL4BQ13620 913 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 CCDC142Q17RM4 750 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 GPR158Q5T848 1215 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 UNC13DQ70J99 1090 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 LIMS2Q7Z4I7 341 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 TMEM150AQ86TG1 271 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 GRAMD1CQ8IYS0 662 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 DCP1BQ8IZD4 617 aaKnown RBP15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 LRRC52Q8N7C0 313 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 RDH13Q8NBN7 331 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 SPPL2BQ8TCT7 592 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 KCNG4Q8TDN1 519 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 DEPDC1BQ8WUY9 529 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 IRF7Q92985 503 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 ZNF560Q96MR9 790 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 NELL2Q99435 816 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 PKMYT1Q99640 499 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 ACBD6Q9BR61 282 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 PI4K2AQ9BTU6 479 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 SLC46A2Q9BY10 475 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 BCO2Q9BYV7 579 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 SLITRK6Q9H5Y7 841 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 ABI2Q9NYB9 513 aaPredicted RBP15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 ITGA11Q9UKX5 1188 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 ZDHHC9Q9Y397 364 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 SNX9Q9Y5X1 595 aa15.49■□□□□ 0.07
CDC42SE2-209ENST00000506419 ANK1P16157 1881 aa15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 F5P12259 2224 aa15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 GABRDO14764 452 aa15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 KIAA0391O15091 583 aaKnown RBP15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 EIF3DO15371 548 aaKnown RBP eCLIP15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 HUS1O60921 280 aa15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 CST3P01034 146 aaPredicted RBP15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 F11P03951 625 aa15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 KRT19P08727 400 aa15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 PDIA4P13667 645 aaKnown RBP15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 AFMP43652 599 aa15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 ME1P48163 572 aa15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 CYP4F8P98187 520 aa15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 SOWAHAQ2M3V2 549 aa15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 FAM26FQ5R3K3 315 aa15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 SDHAF4Q5VUM1 108 aa15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 ITIH5Q86UX2 942 aa15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 NELFCDQ8IXH7 590 aa15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 STKLD1Q8NE28 680 aa15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 FAM200AQ8TCP9 573 aa15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 C2orf15Q8WU43 125 aaKnown RBP15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 GZF1Q9H116 711 aaPredicted RBP15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 TASP1Q9H6P5 420 aa15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 AGPAT3Q9NRZ7 376 aa15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 SPATA6Q9NWH7 488 aaPredicted RBP15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 DDX43Q9NXZ2 648 aaKnown RBP15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 SERTAD1Q9UHV2 236 aa15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 GTF3C4Q9UKN8 822 aa15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 PCDHB5Q9Y5E4 795 aa15.48■□□□□ 0.07
CDC42SE2-209ENST00000506419 MYBPHLA2RUH7 354 aa15.47■□□□□ 0.07
CDC42SE2-209ENST00000506419 MAN2B1O00754 1011 aa15.47■□□□□ 0.07
CDC42SE2-209ENST00000506419 HSP90AA1P07900 732 aaKnown RBP15.47■□□□□ 0.07
CDC42SE2-209ENST00000506419 CYP2F1P24903 491 aa15.47■□□□□ 0.07
CDC42SE2-209ENST00000506419 LMO2P25791 158 aa15.47■□□□□ 0.07
CDC42SE2-209ENST00000506419 WEE1P30291 646 aa15.47■□□□□ 0.07
CDC42SE2-209ENST00000506419 FCHO2Q0JRZ9 810 aa15.47■□□□□ 0.07
CDC42SE2-209ENST00000506419 DDR2Q16832 855 aa15.47■□□□□ 0.07
CDC42SE2-209ENST00000506419 DUOXA2Q1HG44 320 aa15.47■□□□□ 0.07
CDC42SE2-209ENST00000506419 ATL3Q6DD88 541 aa15.47■□□□□ 0.07
CDC42SE2-209ENST00000506419 STXBP4Q6ZWJ1 553 aa15.47■□□□□ 0.07
CDC42SE2-209ENST00000506419 ADSSL1Q8N142 457 aa15.47■□□□□ 0.07
CDC42SE2-209ENST00000506419 ZNF516Q92618 1163 aa15.47■□□□□ 0.07
CDC42SE2-209ENST00000506419 E2F7Q96AV8 911 aa15.47■□□□□ 0.07
CDC42SE2-209ENST00000506419 ZFYVE19Q96K21 471 aa15.47■□□□□ 0.07
CDC42SE2-209ENST00000506419 SMG9Q9H0W8 520 aaKnown RBP15.47■□□□□ 0.07
CDC42SE2-209ENST00000506419 SLC39A2Q9NP94 309 aa15.47■□□□□ 0.07
CDC42SE2-209ENST00000506419 NDRG2Q9UN36 371 aaKnown RBP15.47■□□□□ 0.07
CDC42SE2-209ENST00000506419 FRYLO94915 3013 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms