RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 DNAJC25Q9H1X3 360 aa19.13■□□□□ 0.65
SMN1-204ENST00000506163 VRTNQ9H8Y1 702 aa19.13■□□□□ 0.65
SMN1-204ENST00000506163 LIMD1Q9UGP4 676 aa19.13■□□□□ 0.65
SMN1-204ENST00000506163 R3HCC1Q9Y3T6 440 aaKnown RBP19.13■□□□□ 0.65
SMN1-204ENST00000506163 YIPF1Q9Y548 306 aa19.13■□□□□ 0.65
SMN1-204ENST00000506163 PSMA7O14818 248 aa19.12■□□□□ 0.65
SMN1-204ENST00000506163 ATICP31939 592 aa19.12■□□□□ 0.65
SMN1-204ENST00000506163 LRRC63Q05C16 580 aa19.12■□□□□ 0.65
SMN1-204ENST00000506163 ENPEPQ07075 957 aa19.12■□□□□ 0.65
SMN1-204ENST00000506163 ZDHHC14Q8IZN3 488 aa19.12■□□□□ 0.65
SMN1-204ENST00000506163 TDRD5Q8NAT2 981 aaKnown RBP19.12■□□□□ 0.65
SMN1-204ENST00000506163 ST13P5Q8NFI4 369 aaPredicted RBP19.12■□□□□ 0.65
SMN1-204ENST00000506163 TAS1R2Q8TE23 839 aa19.12■□□□□ 0.65
SMN1-204ENST00000506163 MMS19Q96T76 1030 aa19.12■□□□□ 0.65
SMN1-204ENST00000506163 TSG101Q99816 390 aa19.12■□□□□ 0.65
SMN1-204ENST00000506163 LPIN3Q9BQK8 851 aa19.12■□□□□ 0.65
SMN1-204ENST00000506163 NXF1Q9UBU9 619 aaKnown RBP19.12■□□□□ 0.65
SMN1-204ENST00000506163 MYBPHLA2RUH7 354 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 HLA-DRAP01903 254 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 LRG1P02750 347 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 ASGR2P07307 311 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 RHOP08100 348 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 PDGFRBP09619 1106 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 KRT13P13646 458 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 WARSP23381 471 aaKnown RBP19.11■□□□□ 0.65
SMN1-204ENST00000506163 FSHRP23945 695 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 CCR2P41597 374 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 LHX1P48742 406 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 CDH8P55286 799 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 STX17P56962 302 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 INTS6LQ5JSJ4 861 aaKnown RBP19.11■□□□□ 0.65
SMN1-204ENST00000506163 SPOPLQ6IQ16 392 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 OTOP3Q7RTS5 596 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 SPATA18Q8TC71 538 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 SYAP1Q96A49 352 aaPredicted RBP19.11■□□□□ 0.65
SMN1-204ENST00000506163 TCEAL4Q96EI5 215 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 PI4K2AQ9BTU6 479 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 LRRC3Q9BY71 257 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 SDCBP2Q9H190 292 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 SMYD3Q9H7B4 428 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 CRTAC1Q9NQ79 661 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.11■□□□□ 0.65
SMN1-204ENST00000506163 GTF3C4Q9UKN8 822 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 CTNND2Q9UQB3 1225 aa19.11■□□□□ 0.65
SMN1-204ENST00000506163 TACC1O75410 805 aa19.1■□□□□ 0.65
SMN1-204ENST00000506163 EPB41P11171 864 aaKnown RBP19.1■□□□□ 0.65
SMN1-204ENST00000506163 PTPN2P17706 415 aa19.1■□□□□ 0.65
SMN1-204ENST00000506163 GBP2P32456 591 aaPredicted RBP19.1■□□□□ 0.65
SMN1-204ENST00000506163 STIM1Q13586 685 aa19.1■□□□□ 0.65
SMN1-204ENST00000506163 ZNF699Q32M78 642 aa19.1■□□□□ 0.65
SMN1-204ENST00000506163 PABPC1LQ4VXU2 614 aaKnown RBP19.1■□□□□ 0.65
SMN1-204ENST00000506163 FAM171BQ6P995 826 aa19.1■□□□□ 0.65
SMN1-204ENST00000506163 GET4Q7L5D6 327 aaPredicted RBP19.1■□□□□ 0.65
SMN1-204ENST00000506163 TRIML1Q8N9V2 468 aa19.1■□□□□ 0.65
SMN1-204ENST00000506163 SEMA4DQ92854 862 aa19.1■□□□□ 0.65
SMN1-204ENST00000506163 GBP4Q96PP9 640 aa19.1■□□□□ 0.65
SMN1-204ENST00000506163 CORO1BQ9BR76 489 aa19.1■□□□□ 0.65
SMN1-204ENST00000506163 SMOC2Q9H3U7 446 aa19.1■□□□□ 0.65
SMN1-204ENST00000506163 MMRN2Q9H8L6 949 aa19.1■□□□□ 0.65
SMN1-204ENST00000506163 APOBEC3GQ9HC16 384 aaKnown RBP19.1■□□□□ 0.65
SMN1-204ENST00000506163 C11orf16Q9NQ32 467 aa19.1■□□□□ 0.65
SMN1-204ENST00000506163 ABI2Q9NYB9 513 aaPredicted RBP19.1■□□□□ 0.65
SMN1-204ENST00000506163 EPS15L1Q9UBC2 864 aa19.1■□□□□ 0.65
SMN1-204ENST00000506163 SLC16A3O15427 465 aaKnown RBP19.09■□□□□ 0.65
SMN1-204ENST00000506163 DCXO43602 365 aa19.09■□□□□ 0.65
SMN1-204ENST00000506163 MOSPD3O75425 235 aa19.09■□□□□ 0.65
SMN1-204ENST00000506163 ASS1P00966 412 aaKnown RBP19.09■□□□□ 0.65
SMN1-204ENST00000506163 LAMP2P13473 410 aa19.09■□□□□ 0.65
SMN1-204ENST00000506163 ATF6P18850 670 aa19.09■□□□□ 0.65
SMN1-204ENST00000506163 GNL1P36915 607 aaPredicted RBP19.09■□□□□ 0.65
SMN1-204ENST00000506163 RAP1GAPP47736 663 aa19.09■□□□□ 0.65
SMN1-204ENST00000506163 GPR15P49685 360 aa19.09■□□□□ 0.65
SMN1-204ENST00000506163 PSMC1P62191 440 aaKnown RBP19.09■□□□□ 0.65
SMN1-204ENST00000506163 MYL7Q01449 175 aa19.09■□□□□ 0.65
SMN1-204ENST00000506163 PRSS36Q5K4E3 855 aa19.09■□□□□ 0.65
SMN1-204ENST00000506163 DCP1BQ8IZD4 617 aaKnown RBP19.09■□□□□ 0.65
SMN1-204ENST00000506163 RSAD2Q8WXG1 361 aa19.09■□□□□ 0.65
SMN1-204ENST00000506163 FGF13Q92913 245 aa19.09■□□□□ 0.65
SMN1-204ENST00000506163 TMEM8AQ9HCN3 771 aa19.09■□□□□ 0.65
SMN1-204ENST00000506163 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.09■□□□□ 0.65
SMN1-204ENST00000506163 HSFX1Q9UBD0 423 aa19.09■□□□□ 0.65
SMN1-204ENST00000506163 TECTAO75443 2155 aa19.09■□□□□ 0.65
SMN1-204ENST00000506163 FAM163BP0C2L3 166 aa19.08■□□□□ 0.65
SMN1-204ENST00000506163 HAPLN1P10915 354 aaPredicted RBP19.08■□□□□ 0.65
SMN1-204ENST00000506163 PPP1R2P41236 205 aa19.08■□□□□ 0.65
SMN1-204ENST00000506163 TNNC1P63316 161 aa19.08■□□□□ 0.65
SMN1-204ENST00000506163 TSPY1Q01534 308 aa19.08■□□□□ 0.65
SMN1-204ENST00000506163 SGSM1Q2NKQ1 1148 aa19.08■□□□□ 0.65
SMN1-204ENST00000506163 CBWD6Q4V339 395 aa19.08■□□□□ 0.65
SMN1-204ENST00000506163 ZNF667Q5HYK9 610 aa19.08■□□□□ 0.65
SMN1-204ENST00000506163 CBWD3Q5JTY5 395 aa19.08■□□□□ 0.65
SMN1-204ENST00000506163 CBWD5Q5RIA9 395 aa19.08■□□□□ 0.65
SMN1-204ENST00000506163 FILIP1Q7Z7B0 1213 aa19.08■□□□□ 0.65
SMN1-204ENST00000506163 PLCD3Q8N3E9 789 aa19.08■□□□□ 0.65
SMN1-204ENST00000506163 ING5Q8WYH8 240 aa19.08■□□□□ 0.65
SMN1-204ENST00000506163 ACSF2Q96CM8 615 aaPredicted RBP19.08■□□□□ 0.65
SMN1-204ENST00000506163 ZNF512Q96ME7 567 aaPredicted RBP19.08■□□□□ 0.65
SMN1-204ENST00000506163 SEPT5Q99719 369 aaPredicted RBP19.08■□□□□ 0.65
SMN1-204ENST00000506163 SYT15Q9BQS2 421 aa19.08■□□□□ 0.65
SMN1-204ENST00000506163 DPEP3Q9H4B8 488 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms