RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 TULP1O00294 542 aaPredicted RBP22.69■■□□□ 1.22
SQSTM1-210ENST00000506042 SLC30A4O14863 429 aa22.69■■□□□ 1.22
SQSTM1-210ENST00000506042 FAM189A1O60320 539 aa22.69■■□□□ 1.22
SQSTM1-210ENST00000506042 ACOT2P49753 483 aa22.69■■□□□ 1.22
SQSTM1-210ENST00000506042 GUCY2FP51841 1108 aa22.69■■□□□ 1.22
SQSTM1-210ENST00000506042 MCM6Q14566 821 aa22.69■■□□□ 1.22
SQSTM1-210ENST00000506042 PON2Q15165 354 aa22.69■■□□□ 1.22
SQSTM1-210ENST00000506042 HEATR6Q6AI08 1181 aaKnown RBP22.69■■□□□ 1.22
SQSTM1-210ENST00000506042 PRR23CQ6ZRP0 262 aa22.69■■□□□ 1.22
SQSTM1-210ENST00000506042 WDR5BQ86VZ2 330 aa22.69■■□□□ 1.22
SQSTM1-210ENST00000506042 CMTM8Q8IZV2 173 aa22.69■■□□□ 1.22
SQSTM1-210ENST00000506042 LOXL4Q96JB6 756 aa22.69■■□□□ 1.22
SQSTM1-210ENST00000506042 TMX3Q96JJ7 454 aa22.69■■□□□ 1.22
SQSTM1-210ENST00000506042 TMEM209Q96SK2 561 aa22.69■■□□□ 1.22
SQSTM1-210ENST00000506042 GTSE1Q9NYZ3 720 aa22.69■■□□□ 1.22
SQSTM1-210ENST00000506042 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.68■■□□□ 1.22
SQSTM1-210ENST00000506042 HUS1O60921 280 aa22.68■■□□□ 1.22
SQSTM1-210ENST00000506042 GAP43P17677 238 aa22.68■■□□□ 1.22
SQSTM1-210ENST00000506042 PDCP20941 246 aa22.68■■□□□ 1.22
SQSTM1-210ENST00000506042 DDIT3P35638 169 aa22.68■■□□□ 1.22
SQSTM1-210ENST00000506042 MYL7Q01449 175 aa22.68■■□□□ 1.22
SQSTM1-210ENST00000506042 ALCAMQ13740 583 aa22.68■■□□□ 1.22
SQSTM1-210ENST00000506042 STXBP5Q5T5C0 1151 aa22.68■■□□□ 1.22
SQSTM1-210ENST00000506042 FSIP1Q8NA03 581 aa22.68■■□□□ 1.22
SQSTM1-210ENST00000506042 KIF2CQ99661 725 aa22.68■■□□□ 1.22
SQSTM1-210ENST00000506042 CRISPLD1Q9H336 500 aa22.68■■□□□ 1.22
SQSTM1-210ENST00000506042 VNN2O95498 520 aa22.67■■□□□ 1.22
SQSTM1-210ENST00000506042 CCDC192P0DO97 292 aa22.67■■□□□ 1.22
SQSTM1-210ENST00000506042 HAPLN1P10915 354 aaPredicted RBP22.67■■□□□ 1.22
SQSTM1-210ENST00000506042 SOX9P48436 509 aa22.67■■□□□ 1.22
SQSTM1-210ENST00000506042 PDE6CP51160 858 aa22.67■■□□□ 1.22
SQSTM1-210ENST00000506042 PDGFRLQ15198 375 aa22.67■■□□□ 1.22
SQSTM1-210ENST00000506042 FBXO43Q4G163 708 aa22.67■■□□□ 1.22
SQSTM1-210ENST00000506042 AASDHQ4L235 1098 aaPredicted RBP22.67■■□□□ 1.22
SQSTM1-210ENST00000506042 TMEM86AQ8N2M4 240 aa22.67■■□□□ 1.22
SQSTM1-210ENST00000506042 OR10T2Q8NGX3 314 aa22.67■■□□□ 1.22
SQSTM1-210ENST00000506042 SPATA18Q8TC71 538 aa22.67■■□□□ 1.22
SQSTM1-210ENST00000506042 LPIN3Q9BQK8 851 aa22.67■■□□□ 1.22
SQSTM1-210ENST00000506042 MRPL44Q9H9J2 332 aaKnown RBP22.67■■□□□ 1.22
SQSTM1-210ENST00000506042 RBM12Q9NTZ6 932 aaKnown RBP22.67■■□□□ 1.22
SQSTM1-210ENST00000506042 TDP1Q9NUW8 608 aa22.67■■□□□ 1.22
SQSTM1-210ENST00000506042 F5P12259 2224 aa22.67■■□□□ 1.22
SQSTM1-210ENST00000506042 DCDC2BA2VCK2 349 aa22.66■■□□□ 1.22
SQSTM1-210ENST00000506042 AKAP3O75969 853 aa22.66■■□□□ 1.22
SQSTM1-210ENST00000506042 CYP4F8P98187 520 aa22.66■■□□□ 1.22
SQSTM1-210ENST00000506042 NR1H3Q13133 447 aa22.66■■□□□ 1.22
SQSTM1-210ENST00000506042 RUNX3Q13761 415 aa22.66■■□□□ 1.22
SQSTM1-210ENST00000506042 CCINQ13939 588 aa22.66■■□□□ 1.22
SQSTM1-210ENST00000506042 KARSQ15046 597 aaKnown RBP22.66■■□□□ 1.22
SQSTM1-210ENST00000506042 STXBP4Q6ZWJ1 553 aa22.66■■□□□ 1.22
SQSTM1-210ENST00000506042 CACNA2D4Q7Z3S7 1137 aa22.66■■□□□ 1.22
SQSTM1-210ENST00000506042 SYCP3Q8IZU3 236 aa22.66■■□□□ 1.22
SQSTM1-210ENST00000506042 CPA6Q8N4T0 437 aa22.66■■□□□ 1.22
SQSTM1-210ENST00000506042 TTC8Q8TAM2 541 aa22.66■■□□□ 1.22
SQSTM1-210ENST00000506042 RSPRY1Q96DX4 576 aa22.66■■□□□ 1.22
SQSTM1-210ENST00000506042 ZFYVE19Q96K21 471 aa22.66■■□□□ 1.22
SQSTM1-210ENST00000506042 ACCSQ96QU6 501 aa22.66■■□□□ 1.22
SQSTM1-210ENST00000506042 ABCB6Q9NP58 842 aa22.66■■□□□ 1.22
SQSTM1-210ENST00000506042 GKN1Q9NS71 199 aa22.66■■□□□ 1.22
SQSTM1-210ENST00000506042 PCDHB13Q9Y5F0 798 aa22.66■■□□□ 1.22
SQSTM1-210ENST00000506042 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.66■■□□□ 1.22
SQSTM1-210ENST00000506042 STYXL1Q9Y6J8 313 aa22.66■■□□□ 1.22
SQSTM1-210ENST00000506042 DMDP11532 3685 aa22.66■■□□□ 1.22
SQSTM1-210ENST00000506042 TSC2P49815 1807 aa22.66■■□□□ 1.22
SQSTM1-210ENST00000506042 PPEF2O14830 753 aa22.65■■□□□ 1.22
SQSTM1-210ENST00000506042 PRPF40AO75400 957 aaKnown RBP22.65■■□□□ 1.22
SQSTM1-210ENST00000506042 SOAT2O75908 522 aa22.65■■□□□ 1.22
SQSTM1-210ENST00000506042 DRD1P21728 446 aa22.65■■□□□ 1.22
SQSTM1-210ENST00000506042 NMT1P30419 496 aaKnown RBP22.65■■□□□ 1.22
SQSTM1-210ENST00000506042 CAMKK1Q8N5S9 505 aa22.65■■□□□ 1.22
SQSTM1-210ENST00000506042 TTC9BQ8N6N2 239 aa22.65■■□□□ 1.22
SQSTM1-210ENST00000506042 GIPC2Q8TF65 315 aa22.65■■□□□ 1.22
SQSTM1-210ENST00000506042 MKNK1Q9BUB5 465 aa22.65■■□□□ 1.22
SQSTM1-210ENST00000506042 PARD6AQ9NPB6 346 aa22.65■■□□□ 1.22
SQSTM1-210ENST00000506042 BLOC1S4Q9NUP1 217 aa22.65■■□□□ 1.22
SQSTM1-210ENST00000506042 EHD2Q9NZN4 543 aa22.65■■□□□ 1.22
SQSTM1-210ENST00000506042 DCHS1Q96JQ0 3298 aa22.64■■□□□ 1.22
SQSTM1-210ENST00000506042 K7ESF4 209 aa22.64■■□□□ 1.21
SQSTM1-210ENST00000506042 NRG2O14511 850 aaPredicted RBP22.64■■□□□ 1.21
SQSTM1-210ENST00000506042 RPP40O75818 363 aaKnown RBP22.64■■□□□ 1.21
SQSTM1-210ENST00000506042 PRAMEF12O95522 483 aa22.64■■□□□ 1.21
SQSTM1-210ENST00000506042 ATF6P18850 670 aa22.64■■□□□ 1.21
SQSTM1-210ENST00000506042 TGM1P22735 817 aa22.64■■□□□ 1.21
SQSTM1-210ENST00000506042 PCSK1P29120 753 aa22.64■■□□□ 1.21
SQSTM1-210ENST00000506042 TFAMQ00059 246 aaKnown RBP22.64■■□□□ 1.21
SQSTM1-210ENST00000506042 ZNF268Q14587 947 aaPredicted RBP22.64■■□□□ 1.21
SQSTM1-210ENST00000506042 PPM1JQ5JR12 505 aa22.64■■□□□ 1.21
SQSTM1-210ENST00000506042 WSCD1Q658N2 575 aa22.64■■□□□ 1.21
SQSTM1-210ENST00000506042 Q6ZS52 159 aa22.64■■□□□ 1.21
SQSTM1-210ENST00000506042 SV2BQ7L1I2 683 aa22.64■■□□□ 1.21
SQSTM1-210ENST00000506042 GPIHBP1Q8IV16 184 aa22.64■■□□□ 1.21
SQSTM1-210ENST00000506042 MAB21L3Q8N8X9 362 aa22.64■■□□□ 1.21
SQSTM1-210ENST00000506042 LEO1Q8WVC0 666 aaPredicted RBP22.64■■□□□ 1.21
SQSTM1-210ENST00000506042 GAB3Q8WWW8 586 aa22.64■■□□□ 1.21
SQSTM1-210ENST00000506042 ACDQ96AP0 544 aa22.64■■□□□ 1.21
SQSTM1-210ENST00000506042 MAGED2Q9UNF1 606 aaPredicted RBP22.64■■□□□ 1.21
SQSTM1-210ENST00000506042 RALGAPA1Q6GYQ0 2036 aa22.64■■□□□ 1.21
SQSTM1-210ENST00000506042 NCANO14594 1321 aa22.63■■□□□ 1.21
SQSTM1-210ENST00000506042 KIAA0391O15091 583 aaKnown RBP22.63■■□□□ 1.21
SQSTM1-210ENST00000506042 HRO43593 1189 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms