RNA–Protein interactions for RNA: ENST00000505377.1

COL25A1-205, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 448 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-205ENST00000505377 CMTM8Q8IZV2 173 aa13.04□□□□□ -0.32
COL25A1-205ENST00000505377 IGSF22Q8N9C0 903 aa13.04□□□□□ -0.32
COL25A1-205ENST00000505377 USP13Q92995 863 aaPredicted RBP13.04□□□□□ -0.32
COL25A1-205ENST00000505377 C8orf76Q96K31 380 aa13.04□□□□□ -0.32
COL25A1-205ENST00000505377 DRC1Q96MC2 740 aa13.04□□□□□ -0.32
COL25A1-205ENST00000505377 PLIN2Q99541 437 aa13.04□□□□□ -0.32
COL25A1-205ENST00000505377 EDEM2Q9BV94 578 aa13.04□□□□□ -0.32
COL25A1-205ENST00000505377 PLEKHA5Q9HAU0 1116 aa13.04□□□□□ -0.32
COL25A1-205ENST00000505377 DAXXQ9UER7 740 aaPredicted RBP13.04□□□□□ -0.32
COL25A1-205ENST00000505377 UBQLN1Q9UMX0 589 aaKnown RBP13.04□□□□□ -0.32
COL25A1-205ENST00000505377 PCDHB6Q9Y5E3 794 aa13.04□□□□□ -0.32
COL25A1-205ENST00000505377 PCDHGA5Q9Y5G8 931 aa13.04□□□□□ -0.32
COL25A1-205ENST00000505377 SCN1AP35498 2009 aa13.03□□□□□ -0.32
COL25A1-205ENST00000505377 FAM189A1O60320 539 aa13.03□□□□□ -0.32
COL25A1-205ENST00000505377 PLS3P13797 630 aa13.03□□□□□ -0.32
COL25A1-205ENST00000505377 CYP3A5P20815 502 aa13.03□□□□□ -0.32
COL25A1-205ENST00000505377 GPR15P49685 360 aa13.03□□□□□ -0.32
COL25A1-205ENST00000505377 ZNF252P-AS1Q0IIN9 211 aa13.03□□□□□ -0.32
COL25A1-205ENST00000505377 ORC2Q13416 577 aaPredicted RBP13.03□□□□□ -0.32
COL25A1-205ENST00000505377 PDIA5Q14554 519 aa13.03□□□□□ -0.32
COL25A1-205ENST00000505377 MGAT5BQ3V5L5 792 aa13.03□□□□□ -0.32
COL25A1-205ENST00000505377 SDHAF4Q5VUM1 108 aa13.03□□□□□ -0.32
COL25A1-205ENST00000505377 TXNDC8Q6A555 127 aa13.03□□□□□ -0.32
COL25A1-205ENST00000505377 ARMCX5Q6P1M9 558 aa13.03□□□□□ -0.32
COL25A1-205ENST00000505377 ZPBP2Q6X784 338 aa13.03□□□□□ -0.32
COL25A1-205ENST00000505377 ITIH5Q86UX2 942 aa13.03□□□□□ -0.32
COL25A1-205ENST00000505377 MAB21L3Q8N8X9 362 aa13.03□□□□□ -0.32
COL25A1-205ENST00000505377 SPIRE2Q8WWL2 714 aa13.03□□□□□ -0.32
COL25A1-205ENST00000505377 FAM212AQ96EL1 285 aa13.03□□□□□ -0.32
COL25A1-205ENST00000505377 PNMA5Q96PV4 448 aa13.03□□□□□ -0.32
COL25A1-205ENST00000505377 OXCT2Q9BYC2 517 aaPredicted RBP13.03□□□□□ -0.32
COL25A1-205ENST00000505377 ZCWPW1Q9H0M4 648 aa13.03□□□□□ -0.32
COL25A1-205ENST00000505377 FOXP1Q9H334 677 aaPredicted RBP13.03□□□□□ -0.32
COL25A1-205ENST00000505377 THG1LQ9NWX6 298 aaKnown RBP13.03□□□□□ -0.32
COL25A1-205ENST00000505377 LNP1A1A4G5 178 aa13.02□□□□□ -0.33
COL25A1-205ENST00000505377 BCLAF3A2AJT9 711 aaKnown RBP13.02□□□□□ -0.33
COL25A1-205ENST00000505377 PCNX2A6NKB5 2137 aa13.02□□□□□ -0.33
COL25A1-205ENST00000505377 PATE3B3GLJ2 98 aa13.02□□□□□ -0.33
COL25A1-205ENST00000505377 ATG13O75143 517 aa13.02□□□□□ -0.33
COL25A1-205ENST00000505377 AKAP3O75969 853 aa13.02□□□□□ -0.33
COL25A1-205ENST00000505377 FGF19O95750 216 aa13.02□□□□□ -0.33
COL25A1-205ENST00000505377 CAVIN2O95810 425 aa13.02□□□□□ -0.33
COL25A1-205ENST00000505377 F11P03951 625 aa13.02□□□□□ -0.33
COL25A1-205ENST00000505377 NFICP08651 508 aa13.02□□□□□ -0.33
COL25A1-205ENST00000505377 HMGA1P17096 107 aaKnown RBP13.02□□□□□ -0.33
COL25A1-205ENST00000505377 GUCY2CP25092 1073 aa13.02□□□□□ -0.33
COL25A1-205ENST00000505377 CDC25CP30307 473 aa13.02□□□□□ -0.33
COL25A1-205ENST00000505377 NEK4P51957 841 aa13.02□□□□□ -0.33
COL25A1-205ENST00000505377 PPP2R3AQ06190 1150 aa13.02□□□□□ -0.33
COL25A1-205ENST00000505377 SH3PXD2AQ5TCZ1 1133 aa13.02□□□□□ -0.33
COL25A1-205ENST00000505377 SPATA1Q5VX52 437 aa13.02□□□□□ -0.33
COL25A1-205ENST00000505377 C9orf57Q5W0N0 161 aa13.02□□□□□ -0.33
COL25A1-205ENST00000505377 JADE1Q6IE81 842 aa13.02□□□□□ -0.33
COL25A1-205ENST00000505377 KDF1Q8NAX2 398 aaPredicted RBP13.02□□□□□ -0.33
COL25A1-205ENST00000505377 RPLP0P6Q8NHW5 317 aa13.02□□□□□ -0.33
COL25A1-205ENST00000505377 TMLHEQ9NVH6 421 aa13.02□□□□□ -0.33
COL25A1-205ENST00000505377 DMXL2Q8TDJ6 3036 aa13.02□□□□□ -0.33
COL25A1-205ENST00000505377 ZNF638Q14966 1978 aaKnown RBP13.01□□□□□ -0.33
COL25A1-205ENST00000505377 NUP205Q92621 2012 aa13.01□□□□□ -0.33
COL25A1-205ENST00000505377 PIRO00625 290 aa13.01□□□□□ -0.33
COL25A1-205ENST00000505377 HAPLN1P10915 354 aaPredicted RBP13.01□□□□□ -0.33
COL25A1-205ENST00000505377 ODC1P11926 461 aa13.01□□□□□ -0.33
COL25A1-205ENST00000505377 BCKDHBP21953 392 aa13.01□□□□□ -0.33
COL25A1-205ENST00000505377 GJA4P35212 333 aa13.01□□□□□ -0.33
COL25A1-205ENST00000505377 TUFMP49411 452 aaKnown RBP13.01□□□□□ -0.33
COL25A1-205ENST00000505377 NLRP12P59046 1061 aa13.01□□□□□ -0.33
COL25A1-205ENST00000505377 ANAPC15P60006 121 aa13.01□□□□□ -0.33
COL25A1-205ENST00000505377 DMC1Q14565 340 aa13.01□□□□□ -0.33
COL25A1-205ENST00000505377 KRT79Q5XKE5 535 aa13.01□□□□□ -0.33
COL25A1-205ENST00000505377 CCDC83Q8IWF9 413 aa13.01□□□□□ -0.33
COL25A1-205ENST00000505377 CAMKK1Q8N5S9 505 aa13.01□□□□□ -0.33
COL25A1-205ENST00000505377 TTC16Q8NEE8 873 aa13.01□□□□□ -0.33
COL25A1-205ENST00000505377 FBXO18Q8NFZ0 1043 aa13.01□□□□□ -0.33
COL25A1-205ENST00000505377 BICD1Q96G01 975 aa13.01□□□□□ -0.33
COL25A1-205ENST00000505377 P2RY13Q9BPV8 354 aa13.01□□□□□ -0.33
COL25A1-205ENST00000505377 C17orf75Q9HAS0 396 aa13.01□□□□□ -0.33
COL25A1-205ENST00000505377 TBX20Q9UMR3 447 aa13.01□□□□□ -0.33
COL25A1-205ENST00000505377 TSC2P49815 1807 aa13.01□□□□□ -0.33
COL25A1-205ENST00000505377 MYH11P35749 1972 aa13.01□□□□□ -0.33
COL25A1-205ENST00000505377 THADAQ6YHU6 1953 aa13□□□□□ -0.33
COL25A1-205ENST00000505377 DENND4CQ5VZ89 1909 aa13□□□□□ -0.33
COL25A1-205ENST00000505377 TISP43B9A030 160 aa13□□□□□ -0.33
COL25A1-205ENST00000505377 CDX4O14627 284 aaPredicted RBP13□□□□□ -0.33
COL25A1-205ENST00000505377 CYP11A1P05108 521 aa13□□□□□ -0.33
COL25A1-205ENST00000505377 ADRB2P07550 413 aa13□□□□□ -0.33
COL25A1-205ENST00000505377 GBP1P32455 592 aa13□□□□□ -0.33
COL25A1-205ENST00000505377 AVPR1AP37288 418 aa13□□□□□ -0.33
COL25A1-205ENST00000505377 VEPH1Q14D04 833 aa13□□□□□ -0.33
COL25A1-205ENST00000505377 PTPAQ15257 358 aa13□□□□□ -0.33
COL25A1-205ENST00000505377 ELF2Q15723 593 aa13□□□□□ -0.33
COL25A1-205ENST00000505377 TAF12Q16514 161 aa13□□□□□ -0.33
COL25A1-205ENST00000505377 ARSHQ5FYA8 562 aa13□□□□□ -0.33
COL25A1-205ENST00000505377 WSCD1Q658N2 575 aa13□□□□□ -0.33
COL25A1-205ENST00000505377 SCARA3Q6AZY7 606 aa13□□□□□ -0.33
COL25A1-205ENST00000505377 KIAA1211LQ6NV74 962 aa13□□□□□ -0.33
COL25A1-205ENST00000505377 SLC39A4Q6P5W5 647 aa13□□□□□ -0.33
COL25A1-205ENST00000505377 GATA6Q92908 595 aa13□□□□□ -0.33
COL25A1-205ENST00000505377 GCNAQ96QF7 691 aa13□□□□□ -0.33
COL25A1-205ENST00000505377 SLC22A12Q96S37 553 aa13□□□□□ -0.33
COL25A1-205ENST00000505377 CYP2S1Q96SQ9 504 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms