RNA–Protein interactions for RNA: ENST00000505237.2

PLXND1-208, Transcript of plexin D1, human

TSL 5

Gene PLXND1, Length 507 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLXND1-208	ENST00000505237	FAM3C	Q92520	227 aa		21.32	■■□□□ 1
PLXND1-208	ENST00000505237	LPIN3	Q9BQK8	851 aa		21.32	■■□□□ 1
PLXND1-208	ENST00000505237	TFIP11	Q9UBB9	837 aa	Known RBP	21.32	■■□□□ 1
PLXND1-208	ENST00000505237	ITGA11	Q9UKX5	1188 aa		21.32	■■□□□ 1
PLXND1-208	ENST00000505237	AGAP1	Q9UPQ3	857 aa		21.32	■■□□□ 1
PLXND1-208	ENST00000505237	FRYL	O94915	3013 aa		21.31	■■□□□ 1
PLXND1-208	ENST00000505237	GOLGA8IP	A6NC78	632 aa		21.31	■■□□□ 1
PLXND1-208	ENST00000505237	GOLGA8J	A6NMD2	632 aa		21.31	■■□□□ 1
PLXND1-208	ENST00000505237	YEATS4	O95619	227 aa		21.31	■■□□□ 1
PLXND1-208	ENST00000505237	HAPLN1	P10915	354 aa	Predicted RBP	21.31	■■□□□ 1
PLXND1-208	ENST00000505237	CDC25C	P30307	473 aa		21.31	■■□□□ 1
PLXND1-208	ENST00000505237	GPR158	Q5T848	1215 aa		21.31	■■□□□ 1
PLXND1-208	ENST00000505237	MAMSTR	Q6ZN01	415 aa		21.31	■■□□□ 1
PLXND1-208	ENST00000505237	TMEM86A	Q8N2M4	240 aa		21.31	■■□□□ 1
PLXND1-208	ENST00000505237	PDCL2	Q8N4E4	241 aa		21.31	■■□□□ 1
PLXND1-208	ENST00000505237	NELL1	Q92832	810 aa		21.31	■■□□□ 1
PLXND1-208	ENST00000505237	MSANTD3	Q96H12	275 aa		21.31	■■□□□ 1
PLXND1-208	ENST00000505237	IER2	Q9BTL4	223 aa		21.31	■■□□□ 1
PLXND1-208	ENST00000505237	TRIM9	Q9C026	710 aa		21.31	■■□□□ 1
PLXND1-208	ENST00000505237	PCIF1	Q9H4Z3	704 aa		21.31	■■□□□ 1
PLXND1-208	ENST00000505237	TASP1	Q9H6P5	420 aa		21.31	■■□□□ 1
PLXND1-208	ENST00000505237	IL21	Q9HBE4	155 aa		21.31	■■□□□ 1
PLXND1-208	ENST00000505237	PRMT8	Q9NR22	394 aa	Predicted RBP	21.31	■■□□□ 1
PLXND1-208	ENST00000505237	OBP2A	Q9NY56	170 aa		21.31	■■□□□ 1
PLXND1-208	ENST00000505237	ABI2	Q9NYB9	513 aa	Predicted RBP	21.31	■■□□□ 1
PLXND1-208	ENST00000505237	NDRG2	Q9UN36	371 aa	Known RBP	21.31	■■□□□ 1
PLXND1-208	ENST00000505237	PCDHB5	Q9Y5E4	795 aa		21.31	■■□□□ 1
PLXND1-208	ENST00000505237	PCDHGA2	Q9Y5H1	932 aa		21.31	■■□□□ 1
PLXND1-208	ENST00000505237	PDIA4	P13667	645 aa	Known RBP	21.3	■■□□□ 1
PLXND1-208	ENST00000505237	AMPD3	Q01432	767 aa		21.3	■■□□□ 1
PLXND1-208	ENST00000505237	TSPY1	Q01534	308 aa		21.3	■■□□□ 1
PLXND1-208	ENST00000505237	MTAP	Q13126	283 aa		21.3	■■□□□ 1
PLXND1-208	ENST00000505237	NFE2	Q16621	373 aa	Predicted RBP	21.3	■■□□□ 1
PLXND1-208	ENST00000505237	CNNM4	Q6P4Q7	775 aa		21.3	■■□□□ 1
PLXND1-208	ENST00000505237	C1orf228	Q6PIY5	440 aa		21.3	■■□□□ 1
PLXND1-208	ENST00000505237	GPD1L	Q8N335	351 aa		21.3	■■□□□ 1
PLXND1-208	ENST00000505237	CSGALNACT2	Q8N6G5	542 aa		21.3	■■□□□ 1
PLXND1-208	ENST00000505237	CSGALNACT1	Q8TDX6	532 aa		21.3	■■□□□ 1
PLXND1-208	ENST00000505237	LRRC3B	Q96PB8	259 aa		21.3	■■□□□ 1
PLXND1-208	ENST00000505237	GCNA	Q96QF7	691 aa		21.3	■■□□□ 1
PLXND1-208	ENST00000505237	ACBD6	Q9BR61	282 aa		21.3	■■□□□ 1
PLXND1-208	ENST00000505237	CHRD	Q9H2X0	955 aa		21.3	■■□□□ 1
PLXND1-208	ENST00000505237	PDE11A	Q9HCR9	933 aa		21.3	■■□□□ 1
PLXND1-208	ENST00000505237	GDAP2	Q9NXN4	497 aa		21.3	■■□□□ 1
PLXND1-208	ENST00000505237	L1RE1	Q9UN81	338 aa		21.3	■■□□□ 1
PLXND1-208	ENST00000505237	TULP1	O00294	542 aa	Predicted RBP	21.29	■■□□□ 1
PLXND1-208	ENST00000505237	DPYSL4	O14531	572 aa		21.29	■■□□□ 1
PLXND1-208	ENST00000505237	KIN	O60870	393 aa	Known RBP	21.29	■■□□□ 1
PLXND1-208	ENST00000505237	CUTA	O60888	179 aa		21.29	■■□□□ 1
PLXND1-208	ENST00000505237	HUS1	O60921	280 aa		21.29	■■□□□ 1
PLXND1-208	ENST00000505237	CDR1	P51861	262 aa		21.29	■■□□□ 1
PLXND1-208	ENST00000505237	RBP5	P82980	135 aa		21.29	■■□□□ 1
PLXND1-208	ENST00000505237	TAF12	Q16514	161 aa		21.29	■■□□□ 1
PLXND1-208	ENST00000505237	SHC4	Q6S5L8	630 aa		21.29	■■□□□ 1
PLXND1-208	ENST00000505237	IQUB	Q8NA54	791 aa		21.29	■■□□□ 1
PLXND1-208	ENST00000505237	SUMF1	Q8NBK3	374 aa		21.29	■■□□□ 1
PLXND1-208	ENST00000505237	ZBTB44	Q8NCP5	570 aa		21.29	■■□□□ 1
PLXND1-208	ENST00000505237	GLIS3	Q8NEA6	775 aa		21.29	■■□□□ 1
PLXND1-208	ENST00000505237	SPATA18	Q8TC71	538 aa		21.29	■■□□□ 1
PLXND1-208	ENST00000505237	LEO1	Q8WVC0	666 aa	Predicted RBP	21.29	■■□□□ 1
PLXND1-208	ENST00000505237	TMLHE	Q9NVH6	421 aa		21.29	■■□□□ 1
PLXND1-208	ENST00000505237	ZSCAN32	Q9NX65	697 aa		21.29	■■□□□ 1
PLXND1-208	ENST00000505237	SIX4	Q9UIU6	781 aa		21.29	■■□□□ 1
PLXND1-208	ENST00000505237	ZMYM5	Q9UJ78	669 aa		21.29	■■□□□ 1
PLXND1-208	ENST00000505237	COL4A2	P08572	1712 aa		21.29	■■□□□ 1
PLXND1-208	ENST00000505237	FANCM	Q8IYD8	2048 aa		21.28	■■□□□ 1
PLXND1-208	ENST00000505237	HOXD13	P35453	343 aa		21.28	■■□□□ 1
PLXND1-208	ENST00000505237	BFSP1	Q12934	665 aa		21.28	■■□□□ 1
PLXND1-208	ENST00000505237	ARHGAP29	Q52LW3	1261 aa		21.28	■■□□□ 1
PLXND1-208	ENST00000505237	SCARA3	Q6AZY7	606 aa		21.28	■■□□□ 1
PLXND1-208	ENST00000505237	GPIHBP1	Q8IV16	184 aa		21.28	■■□□□ 1
PLXND1-208	ENST00000505237	TOP6BL	Q8N6T0	577 aa		21.28	■■□□□ 1
PLXND1-208	ENST00000505237	GIPC2	Q8TF65	315 aa		21.28	■■□□□ 1
PLXND1-208	ENST00000505237	NOC3L	Q8WTT2	800 aa	Known RBP	21.28	■■□□□ 1
PLXND1-208	ENST00000505237	ATRIP	Q8WXE1	791 aa		21.28	■■□□□ 1
PLXND1-208	ENST00000505237	RUBCN	Q92622	972 aa		21.28	■■□□□ 1
PLXND1-208	ENST00000505237	HPS3	Q969F9	1004 aa		21.28	■■□□□ 1
PLXND1-208	ENST00000505237	FAM84A	Q96KN4	292 aa		21.28	■■□□□ 1
PLXND1-208	ENST00000505237	FAM126A	Q9BYI3	521 aa	Predicted RBP	21.28	■■□□□ 1
PLXND1-208	ENST00000505237	MTMR12	Q9C0I1	747 aa		21.28	■■□□□ 1
PLXND1-208	ENST00000505237	C8orf33	Q9H7E9	229 aa	Predicted RBP	21.28	■■□□□ 1
PLXND1-208	ENST00000505237	LMAN1L	Q9HAT1	526 aa		21.28	■■□□□ 1
PLXND1-208	ENST00000505237	ABCB6	Q9NP58	842 aa		21.28	■■□□□ 1
PLXND1-208	ENST00000505237	INTS13	Q9NVM9	706 aa		21.28	■■□□□ 1
PLXND1-208	ENST00000505237	DDX43	Q9NXZ2	648 aa	Known RBP	21.28	■■□□□ 1
PLXND1-208	ENST00000505237	PATJ	Q8NI35	1801 aa		21.27	■■□□□ 1
PLXND1-208	ENST00000505237	DCHS1	Q96JQ0	3298 aa		21.27	■■□□□ 1
PLXND1-208	ENST00000505237	ZNF233	A6NK53	670 aa		21.27	■■□□□ 1
PLXND1-208	ENST00000505237	EIF3D	O15371	548 aa	Known RBP eCLIP	21.27	■■□□□ 1
PLXND1-208	ENST00000505237	PRAMEF12	O95522	483 aa		21.27	■■□□□ 1
PLXND1-208	ENST00000505237	KRT19	P08727	400 aa		21.27	■■□□□ 1
PLXND1-208	ENST00000505237	TMEM191B	P0C7N4	346 aa		21.27	■■□□□ 1
PLXND1-208	ENST00000505237	HMGA1	P17096	107 aa	Known RBP	21.27	■■□□□ 1
PLXND1-208	ENST00000505237	CCNE1	P24864	410 aa		21.27	■■□□□ 1
PLXND1-208	ENST00000505237	CYP4F8	P98187	520 aa		21.27	■■□□□ 1
PLXND1-208	ENST00000505237	MYL7	Q01449	175 aa		21.27	■■□□□ 1
PLXND1-208	ENST00000505237	SURF1	Q15526	300 aa		21.27	■■□□□ 1
PLXND1-208	ENST00000505237	EPM2AIP1	Q7L775	607 aa	Predicted RBP	21.27	■■□□□ 1
PLXND1-208	ENST00000505237	DHX58	Q96C10	678 aa		21.27	■■□□□ 1
PLXND1-208	ENST00000505237	PKMYT1	Q99640	499 aa		21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms