RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 TMEM191BP0C7N4 346 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 TNNI1P19237 187 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 PTPN4P29074 926 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 CUL2Q13617 745 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 MORF4L2Q15014 288 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 EFHC2Q5JST6 749 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 ZFYVE27Q5T4F4 411 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 DRICH1Q6PGQ1 229 aaPredicted RBP12.53□□□□□ -0.4
UBE3D-206ENST00000505226 SPOCD1Q6ZMY3 1216 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 C4orf50Q6ZRC1 276 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 RCOR2Q8IZ40 523 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 TCP10LQ8TDR4 215 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 ZBTB45Q96K62 511 aaPredicted RBP12.53□□□□□ -0.4
UBE3D-206ENST00000505226 CEP170P1Q96L14 293 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 SENP7Q9BQF6 1050 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 MRPL47Q9HD33 250 aaKnown RBP12.53□□□□□ -0.4
UBE3D-206ENST00000505226 PSMC3IPQ9P2W1 217 aaPredicted RBP12.53□□□□□ -0.4
UBE3D-206ENST00000505226 NUB1Q9Y5A7 615 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 LTBP4Q8N2S1 1624 aa12.53□□□□□ -0.4
UBE3D-206ENST00000505226 SIGLEC16A6NMB1 481 aa12.52□□□□□ -0.4
UBE3D-206ENST00000505226 WASHC2DQ5SRD0 308 aa12.52□□□□□ -0.4
UBE3D-206ENST00000505226 LRRC6Q86X45 466 aa12.52□□□□□ -0.4
UBE3D-206ENST00000505226 TMX4Q9H1E5 349 aaPredicted RBP12.52□□□□□ -0.4
UBE3D-206ENST00000505226 KCNK13Q9HB14 408 aa12.52□□□□□ -0.4
UBE3D-206ENST00000505226 PDLIM7Q9NR12 457 aa12.52□□□□□ -0.4
UBE3D-206ENST00000505226 LNPEPQ9UIQ6 1025 aa12.52□□□□□ -0.4
UBE3D-206ENST00000505226 FARP1Q9Y4F1 1045 aaPredicted RBP12.52□□□□□ -0.4
UBE3D-206ENST00000505226 MYH9P35579 1960 aaKnown RBP12.52□□□□□ -0.4
UBE3D-206ENST00000505226 COL2A1P02458 1487 aaPredicted RBP12.52□□□□□ -0.4
UBE3D-206ENST00000505226 WDR81Q562E7 1941 aa12.52□□□□□ -0.4
UBE3D-206ENST00000505226 hCG_1818297A0A087WSY0 165 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 TCRBV5S1A1TA0A578 114 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 WDR64B1ANS9 1081 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 LUC7L3O95232 432 aaKnown RBP12.52□□□□□ -0.41
UBE3D-206ENST00000505226 MMP10P09238 476 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 VCPP55072 806 aaKnown RBP12.52□□□□□ -0.41
UBE3D-206ENST00000505226 WDR44Q5JSH3 913 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 APBB1IPQ7Z5R6 666 aaPredicted RBP12.52□□□□□ -0.41
UBE3D-206ENST00000505226 SEPT12Q8IYM1 358 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 RBBP8NLQ8NC74 664 aaPredicted RBP12.52□□□□□ -0.41
UBE3D-206ENST00000505226 PTCD3Q96EY7 689 aaKnown RBP12.52□□□□□ -0.41
UBE3D-206ENST00000505226 BICD1Q96G01 975 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 FBXO6Q9NRD1 293 aaPredicted RBP12.52□□□□□ -0.41
UBE3D-206ENST00000505226 TESPA1A2RU30 521 aaPredicted RBP12.52□□□□□ -0.41
UBE3D-206ENST00000505226 SPDYE2BA6NHP3 402 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 E7ENQ6 273 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 TJP3O95049 919 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 SPDYE6P0CI01 402 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 GARTP22102 1010 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 MARK3P27448 753 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 PCK1P35558 622 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 CDKN2BP42772 138 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 NRLP54845 237 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 GEMIN4P57678 1058 aaKnown RBP12.52□□□□□ -0.41
UBE3D-206ENST00000505226 SESN3P58005 492 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 LMNB2Q03252 620 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 THEMIS2Q5TEJ8 643 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 OR5B17Q8NGF7 314 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 UCMAQ8WVF2 138 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 VCPIP1Q96JH7 1222 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 MCEEQ96PE7 176 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 DHRS4Q9BTZ2 278 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 PARVAQ9NVD7 372 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 SENP1Q9P0U3 644 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 GABBR1Q9UBS5 961 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 SLC24A2Q9UI40 661 aa12.52□□□□□ -0.41
UBE3D-206ENST00000505226 DRG1Q9Y295 367 aaKnown RBP12.52□□□□□ -0.41
UBE3D-206ENST00000505226 UTRNP46939 3433 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 SGK1O00141 431 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 MMP8P22894 467 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 CTCFP49711 727 aaPredicted RBP12.51□□□□□ -0.41
UBE3D-206ENST00000505226 BPIFB4P59827 614 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 PSMD6Q15008 389 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 SPDYE2Q495Y8 402 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 SEZ6Q53EL9 994 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 SLC27A3Q5K4L6 730 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 CPT1BQ92523 772 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 FAM136AQ96C01 138 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 ANKRD27Q96NW4 1050 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 NMRK1Q9NWW6 199 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 HEY2Q9UBP5 337 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 ZNF70Q9UC06 446 aaPredicted RBP12.51□□□□□ -0.41
UBE3D-206ENST00000505226 RGPD3A6NKT7 1758 aaPredicted RBP12.51□□□□□ -0.41
UBE3D-206ENST00000505226 RGPD4Q7Z3J3 1758 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 A0A0G2JND7 137 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 CFAP69A5D8W1 941 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 C3orf70A6NLC5 250 aaPredicted RBP12.51□□□□□ -0.41
UBE3D-206ENST00000505226 EXTL3O43909 919 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 EDN1P05305 212 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 INHBEP58166 350 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 IRX1P78414 480 aaPredicted RBP12.51□□□□□ -0.41
UBE3D-206ENST00000505226 SATB1Q01826 763 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 PLCB3Q01970 1234 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 C1QBPQ07021 282 aaKnown RBP12.51□□□□□ -0.41
UBE3D-206ENST00000505226 ACSBG2Q5FVE4 666 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 ADGRD1Q6QNK2 874 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 C3orf62Q6ZUJ4 267 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 CENPUQ71F23 418 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 TEX9Q8N6V9 391 aa12.51□□□□□ -0.41
UBE3D-206ENST00000505226 BANPQ8N9N5 519 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms