RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 TMEM130Q8N3G9 435 aa17.37■□□□□ 0.37
PDLIM7-213ENST00000505074 ZCCHC14Q8WYQ9 949 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-213ENST00000505074 HAPLN2Q9GZV7 340 aa17.37■□□□□ 0.37
PDLIM7-213ENST00000505074 RPF1Q9H9Y2 349 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-213ENST00000505074 PLEKHA5Q9HAU0 1116 aa17.37■□□□□ 0.37
PDLIM7-213ENST00000505074 TBX20Q9UMR3 447 aa17.37■□□□□ 0.37
PDLIM7-213ENST00000505074 UBQLN1Q9UMX0 589 aaKnown RBP17.37■□□□□ 0.37
PDLIM7-213ENST00000505074 PCDHB8Q9UN66 801 aa17.37■□□□□ 0.37
PDLIM7-213ENST00000505074 IGF2RP11717 2491 aa17.36■□□□□ 0.37
PDLIM7-213ENST00000505074 TRAK2O60296 914 aa17.36■□□□□ 0.37
PDLIM7-213ENST00000505074 YWHAHQ04917 246 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-213ENST00000505074 GRIN1Q05586 938 aa17.36■□□□□ 0.37
PDLIM7-213ENST00000505074 ELF2Q15723 593 aa17.36■□□□□ 0.37
PDLIM7-213ENST00000505074 KYAT1Q16773 422 aa17.36■□□□□ 0.37
PDLIM7-213ENST00000505074 GPIHBP1Q8IV16 184 aa17.36■□□□□ 0.37
PDLIM7-213ENST00000505074 RAD54LQ92698 747 aa17.36■□□□□ 0.37
PDLIM7-213ENST00000505074 GATA6Q92908 595 aa17.36■□□□□ 0.37
PDLIM7-213ENST00000505074 ZFYVE19Q96K21 471 aa17.36■□□□□ 0.37
PDLIM7-213ENST00000505074 MSTO1Q9BUK6 570 aa17.36■□□□□ 0.37
PDLIM7-213ENST00000505074 SCNM1Q9BWG6 230 aa17.36■□□□□ 0.37
PDLIM7-213ENST00000505074 TIMM13Q9Y5L4 95 aaPredicted RBP17.36■□□□□ 0.37
PDLIM7-213ENST00000505074 TTC26A0AVF1 554 aa17.35■□□□□ 0.37
PDLIM7-213ENST00000505074 LACTBL1A8MY62 500 aa17.35■□□□□ 0.37
PDLIM7-213ENST00000505074 OGTO15294 1046 aa17.35■□□□□ 0.37
PDLIM7-213ENST00000505074 RHOBTB1O94844 696 aa17.35■□□□□ 0.37
PDLIM7-213ENST00000505074 TOP3BO95985 862 aaKnown RBP17.35■□□□□ 0.37
PDLIM7-213ENST00000505074 CEACAM1P13688 526 aa17.35■□□□□ 0.37
PDLIM7-213ENST00000505074 GUCY2FP51841 1108 aa17.35■□□□□ 0.37
PDLIM7-213ENST00000505074 PLCB2Q00722 1185 aa17.35■□□□□ 0.37
PDLIM7-213ENST00000505074 CREB5Q02930 508 aa17.35■□□□□ 0.37
PDLIM7-213ENST00000505074 PLD1Q13393 1074 aa17.35■□□□□ 0.37
PDLIM7-213ENST00000505074 PTPAQ15257 358 aa17.35■□□□□ 0.37
PDLIM7-213ENST00000505074 PKN3Q6P5Z2 889 aa17.35■□□□□ 0.37
PDLIM7-213ENST00000505074 RNF19BQ6ZMZ0 732 aa17.35■□□□□ 0.37
PDLIM7-213ENST00000505074 CAMKK1Q8N5S9 505 aa17.35■□□□□ 0.37
PDLIM7-213ENST00000505074 LRRC15Q8TF66 581 aa17.35■□□□□ 0.37
PDLIM7-213ENST00000505074 LARP4BQ92615 738 aaKnown RBP17.35■□□□□ 0.37
PDLIM7-213ENST00000505074 TMEM209Q96SK2 561 aa17.35■□□□□ 0.37
PDLIM7-213ENST00000505074 DUSP15Q9H1R2 295 aaPredicted RBP17.35■□□□□ 0.37
PDLIM7-213ENST00000505074 BLOC1S4Q9NUP1 217 aa17.35■□□□□ 0.37
PDLIM7-213ENST00000505074 OBP2AQ9NY56 170 aa17.35■□□□□ 0.37
PDLIM7-213ENST00000505074 YIPF1Q9Y548 306 aa17.35■□□□□ 0.37
PDLIM7-213ENST00000505074 CAVIN2O95810 425 aa17.34■□□□□ 0.37
PDLIM7-213ENST00000505074 SCP2P22307 547 aa17.34■□□□□ 0.37
PDLIM7-213ENST00000505074 NMT1P30419 496 aaKnown RBP17.34■□□□□ 0.37
PDLIM7-213ENST00000505074 EPHB3P54753 998 aa17.34■□□□□ 0.37
PDLIM7-213ENST00000505074 ENOX2Q16206 610 aaKnown RBP17.34■□□□□ 0.37
PDLIM7-213ENST00000505074 ITPRIPL2Q3MIP1 535 aa17.34■□□□□ 0.37
PDLIM7-213ENST00000505074 PKD1L2Q7Z442 2459 aa17.34■□□□□ 0.37
PDLIM7-213ENST00000505074 KRI1Q8N9T8 703 aaKnown RBP17.34■□□□□ 0.37
PDLIM7-213ENST00000505074 BEST2Q8NFU1 509 aa17.34■□□□□ 0.37
PDLIM7-213ENST00000505074 PGLYRP2Q96PD5 576 aa17.34■□□□□ 0.37
PDLIM7-213ENST00000505074 LRRC3Q9BY71 257 aa17.34■□□□□ 0.37
PDLIM7-213ENST00000505074 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.34■□□□□ 0.37
PDLIM7-213ENST00000505074 OR4Q2P0C623 313 aa17.33■□□□□ 0.36
PDLIM7-213ENST00000505074 CYP3A5P20815 502 aa17.33■□□□□ 0.36
PDLIM7-213ENST00000505074 PDCP20941 246 aa17.33■□□□□ 0.36
PDLIM7-213ENST00000505074 CSRP1P21291 193 aaKnown RBP17.33■□□□□ 0.36
PDLIM7-213ENST00000505074 LRPAP1P30533 357 aa17.33■□□□□ 0.36
PDLIM7-213ENST00000505074 ZNF131P52739 623 aa17.33■□□□□ 0.36
PDLIM7-213ENST00000505074 TNK2Q07912 1038 aa17.33■□□□□ 0.36
PDLIM7-213ENST00000505074 GRSF1Q12849 480 aaKnown RBP eCLIP17.33■□□□□ 0.36
PDLIM7-213ENST00000505074 STXBP5Q5T5C0 1151 aa17.33■□□□□ 0.36
PDLIM7-213ENST00000505074 JADE1Q6IE81 842 aa17.33■□□□□ 0.36
PDLIM7-213ENST00000505074 TMC8Q8IU68 726 aa17.33■□□□□ 0.36
PDLIM7-213ENST00000505074 BPIFB1Q8TDL5 484 aa17.33■□□□□ 0.36
PDLIM7-213ENST00000505074 LRRC3BQ96PB8 259 aa17.33■□□□□ 0.36
PDLIM7-213ENST00000505074 THADAQ6YHU6 1953 aa17.32■□□□□ 0.36
PDLIM7-213ENST00000505074 LNP1A1A4G5 178 aa17.32■□□□□ 0.36
PDLIM7-213ENST00000505074 BCLAF3A2AJT9 711 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-213ENST00000505074 M0QZQ0 153 aa17.32■□□□□ 0.36
PDLIM7-213ENST00000505074 PIGRP01833 764 aa17.32■□□□□ 0.36
PDLIM7-213ENST00000505074 ODC1P11926 461 aa17.32■□□□□ 0.36
PDLIM7-213ENST00000505074 ABCD1P33897 745 aa17.32■□□□□ 0.36
PDLIM7-213ENST00000505074 TXLNAP40222 546 aa17.32■□□□□ 0.36
PDLIM7-213ENST00000505074 CEBPZQ03701 1054 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-213ENST00000505074 ZC2HC1CQ53FD0 456 aaPredicted RBP17.32■□□□□ 0.36
PDLIM7-213ENST00000505074 ARHGAP15Q53QZ3 475 aa17.32■□□□□ 0.36
PDLIM7-213ENST00000505074 ADALQ6DHV7 355 aa17.32■□□□□ 0.36
PDLIM7-213ENST00000505074 OVOS1Q6IE37 1185 aa17.32■□□□□ 0.36
PDLIM7-213ENST00000505074 DYMQ7RTS9 669 aa17.32■□□□□ 0.36
PDLIM7-213ENST00000505074 COL26A1Q96A83 441 aa17.32■□□□□ 0.36
PDLIM7-213ENST00000505074 EPSTI1Q96J88 318 aa17.32■□□□□ 0.36
PDLIM7-213ENST00000505074 ATXN3LQ9H3M9 355 aa17.32■□□□□ 0.36
PDLIM7-213ENST00000505074 TMEM9BQ9NQ34 198 aa17.32■□□□□ 0.36
PDLIM7-213ENST00000505074 THG1LQ9NWX6 298 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-213ENST00000505074 CCDC39Q9UFE4 941 aa17.32■□□□□ 0.36
PDLIM7-213ENST00000505074 CLIC4Q9Y696 253 aa17.32■□□□□ 0.36
PDLIM7-213ENST00000505074 LAMA1P25391 3075 aa17.32■□□□□ 0.36
PDLIM7-213ENST00000505074 ZNF638Q14966 1978 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-213ENST00000505074 ANK1P16157 1881 aa17.31■□□□□ 0.36
PDLIM7-213ENST00000505074 A0A0B4J269 797 aa17.31■□□□□ 0.36
PDLIM7-213ENST00000505074 PPEF2O14830 753 aa17.31■□□□□ 0.36
PDLIM7-213ENST00000505074 KHNYNO15037 678 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-213ENST00000505074 FGF19O95750 216 aa17.31■□□□□ 0.36
PDLIM7-213ENST00000505074 NFICP08651 508 aa17.31■□□□□ 0.36
PDLIM7-213ENST00000505074 ALDH1A3P47895 512 aa17.31■□□□□ 0.36
PDLIM7-213ENST00000505074 ACOT2P49753 483 aa17.31■□□□□ 0.36
PDLIM7-213ENST00000505074 TMEM132DQ14C87 1099 aa17.31■□□□□ 0.36
PDLIM7-213ENST00000505074 TMEM196Q5HYL7 178 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms