RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 H7C4K7 107 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 DLATP10515 647 aaKnown RBP8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 HARSP12081 509 aaKnown RBP8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 UCHL3P15374 230 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 HYAL1Q12794 435 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 GPM6BQ13491 265 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 EIF4EBP2Q13542 120 aaPredicted RBP8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 TCEAL1Q15170 157 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 ZNF699Q32M78 642 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 PAN2Q504Q3 1202 aaKnown RBP8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 KIAA1958Q8N8K9 716 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 RDH13Q8NBN7 331 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 CCDC127Q96BQ5 260 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 MYRFLQ96LU7 910 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 HNRNPABQ99729 332 aaKnown RBP8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 HMGXB4Q9UGU5 601 aa8.87□□□□□ -0.99
CDC42SE2-208ENST00000505065 CYB561D2O14569 222 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 UPP2O95045 317 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 LCA5LO95447 670 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 TNNI1P19237 187 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 CTNNB1P35222 781 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 IRS1P35568 1242 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 PIK3CAP42336 1068 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 EXOC3L4Q17RC7 722 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 CCDC40Q4G0X9 1142 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 TRMT2BQ96GJ1 504 aaKnown RBP8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 LRCH3Q96II8 777 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 TMLHEQ9NVH6 421 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 TAB2Q9NYJ8 693 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 TCRBV5S1A1TA0A578 114 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 GYPCP04921 128 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 CLCN1P35523 988 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 LTBRP36941 435 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 GABRB2P47870 512 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 ARTNQ5T4W7 220 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 SPOPLQ6IQ16 392 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 ADGRD2Q7Z7M1 963 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 ADGRF2Q8IZF7 708 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 MYCBPAPQ8TBZ2 947 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 SUSD6Q92537 303 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 LHX5Q9H2C1 402 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 TMEM30AQ9NV96 361 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 WDR27A2RRH5 827 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 ADAM12O43184 909 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 GABBR2O75899 941 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 MATR3P43243 847 aaKnown RBP eCLIP8.86□□□□□ -0.993e-6■■■■□ 23.9
CDC42SE2-208ENST00000505065 OR1G1P47890 313 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 KLK7P49862 253 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 ARID3AQ99856 593 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 INPP5FQ9Y2H2 1132 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 DOCK4Q8N1I0 1966 aa8.86□□□□□ -0.99
CDC42SE2-208ENST00000505065 HIDE1A8MVS5 230 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 CNPP09543 421 aaKnown RBP8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 ZDHHC11BP0C7U3 371 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 TCF3P15923 654 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 ANXA13P27216 316 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 PBX3P40426 434 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 WSCD1Q658N2 575 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 TMEM139Q8IV31 216 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 KCTD13Q8WZ19 329 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 EEF2KMTQ96G04 330 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 C8orf48Q96LL4 319 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 CRISPLD1Q9H336 500 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 NSUN3Q9H649 340 aaKnown RBP8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 CISHQ9NSE2 258 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 CLEC1BQ9P126 229 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 AFF4Q9UHB7 1163 aaKnown RBP8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 USP3Q9Y6I4 520 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 B3GAT3O94766 335 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 CYP1A1P04798 512 aaPredicted RBP8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 CHRNB2P17787 502 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 LMO2P25791 158 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 ZNF75DP51815 510 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 MAPK8IP2Q13387 824 aaPredicted RBP8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 LCLAT1Q6UWP7 414 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 TMC8Q8IU68 726 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 VPS52Q8N1B4 723 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 STK32AQ8WU08 396 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 KMT2EQ8IZD2 1858 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 TEX28O15482 410 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 ATF2P15336 505 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 PTP4A2Q12974 167 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 ZNF667Q5HYK9 610 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 BEND5Q7L4P6 421 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 ZNF677Q86XU0 584 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 KAT5Q92993 513 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 ZNF707Q96C28 371 aaPredicted RBP8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 PI4K2AQ9BTU6 479 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 NUP58Q9BVL2 599 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 B3GNT5Q9BYG0 378 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 XPO4Q9C0E2 1151 aaKnown RBP8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 FHOD1Q9Y613 1164 aa8.85□□□□□ -0.99
CDC42SE2-208ENST00000505065 MTMR11A4FU01 709 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 NCK2O43639 380 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 HAPLN1P10915 354 aaPredicted RBP8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 TRIM14Q14142 442 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 PRSS36Q5K4E3 855 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 ARCQ7LC44 396 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 PPFIBP1Q86W92 1011 aa8.84□□□□□ -0.99
CDC42SE2-208ENST00000505065 ZMIZ2Q8NF64 920 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms