RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 KIF24Q5T7B8 1368 aa6.22□□□□□ -1.41
DEPDC1B-203ENST00000505017 RARRES1P49788 294 aa6.22□□□□□ -1.41
DEPDC1B-203ENST00000505017 SPDYE7PQ495Y7 208 aa6.22□□□□□ -1.41
DEPDC1B-203ENST00000505017 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.22□□□□□ -1.41
DEPDC1B-203ENST00000505017 FAM43AQ8N2R8 423 aa6.22□□□□□ -1.41
DEPDC1B-203ENST00000505017 WDR66Q8TBY9 1149 aa6.22□□□□□ -1.41
DEPDC1B-203ENST00000505017 PDLIM2Q96JY6 352 aa6.22□□□□□ -1.41
DEPDC1B-203ENST00000505017 ADARB2Q9NS39 739 aaKnown RBP6.22□□□□□ -1.41
DEPDC1B-203ENST00000505017 TMEM140Q9NV12 185 aa6.22□□□□□ -1.41
DEPDC1B-203ENST00000505017 TESQ9UGI8 421 aaKnown RBP6.22□□□□□ -1.41
DEPDC1B-203ENST00000505017 GPR45Q9Y5Y3 372 aa6.22□□□□□ -1.41
DEPDC1B-203ENST00000505017 STRCP1A6NGW2 1772 aa6.21□□□□□ -1.41
DEPDC1B-203ENST00000505017 CDHR4A6H8M9 788 aa6.21□□□□□ -1.42
DEPDC1B-203ENST00000505017 FCER1AP12319 257 aa6.21□□□□□ -1.42
DEPDC1B-203ENST00000505017 DDCP20711 480 aa6.21□□□□□ -1.42
DEPDC1B-203ENST00000505017 VAV2P52735 878 aa6.21□□□□□ -1.42
DEPDC1B-203ENST00000505017 SLC5A3P53794 718 aa6.21□□□□□ -1.42
DEPDC1B-203ENST00000505017 GEN1Q17RS7 908 aa6.21□□□□□ -1.42
DEPDC1B-203ENST00000505017 INAVAQ3KP66 663 aa6.21□□□□□ -1.42
DEPDC1B-203ENST00000505017 GJC2Q5T442 439 aaPredicted RBP6.21□□□□□ -1.42
DEPDC1B-203ENST00000505017 FAM180AQ6UWF9 173 aa6.21□□□□□ -1.42
DEPDC1B-203ENST00000505017 SPATS2Q86XZ4 545 aaKnown RBP6.21□□□□□ -1.42
DEPDC1B-203ENST00000505017 CBARPQ8N350 705 aaPredicted RBP6.21□□□□□ -1.42
DEPDC1B-203ENST00000505017 LNX2Q8N448 690 aa6.21□□□□□ -1.42
DEPDC1B-203ENST00000505017 RAB24Q969Q5 203 aa6.21□□□□□ -1.42
DEPDC1B-203ENST00000505017 AIFM2Q9BRQ8 373 aa6.21□□□□□ -1.42
DEPDC1B-203ENST00000505017 RSAD1Q9HA92 442 aa6.21□□□□□ -1.42
DEPDC1B-203ENST00000505017 TLK1Q9UKI8 766 aa6.21□□□□□ -1.42
DEPDC1B-203ENST00000505017 DNM3Q9UQ16 869 aa6.21□□□□□ -1.42
DEPDC1B-203ENST00000505017 PIK3C2AO00443 1686 aa6.2□□□□□ -1.42
DEPDC1B-203ENST00000505017 TMEM94Q12767 1356 aa6.2□□□□□ -1.42
DEPDC1B-203ENST00000505017 MST1RQ04912 1400 aa6.2□□□□□ -1.42
DEPDC1B-203ENST00000505017 LRRC3CA6NJW4 275 aa6.2□□□□□ -1.42
DEPDC1B-203ENST00000505017 IGLV2-14P01704 120 aa6.2□□□□□ -1.42
DEPDC1B-203ENST00000505017 SBK3P0C264 359 aa6.2□□□□□ -1.42
DEPDC1B-203ENST00000505017 TNNT2P45379 298 aaPredicted RBP6.2□□□□□ -1.42
DEPDC1B-203ENST00000505017 HSPA2P54652 639 aa6.2□□□□□ -1.42
DEPDC1B-203ENST00000505017 TARDBPQ13148 414 aaKnown RBP eCLIP6.2□□□□□ -1.42
DEPDC1B-203ENST00000505017 TAF7LQ5H9L4 462 aa6.2□□□□□ -1.42
DEPDC1B-203ENST00000505017 DACT2Q5SW24 774 aa6.2□□□□□ -1.42
DEPDC1B-203ENST00000505017 LRCH2Q5VUJ6 765 aa6.2□□□□□ -1.42
DEPDC1B-203ENST00000505017 NRG4Q8WWG1 115 aa6.2□□□□□ -1.42
DEPDC1B-203ENST00000505017 RUNDC1Q96C34 613 aa6.2□□□□□ -1.42
DEPDC1B-203ENST00000505017 CYFIP2Q96F07 1278 aa6.2□□□□□ -1.42
DEPDC1B-203ENST00000505017 SLKQ9H2G2 1235 aaPredicted RBP6.2□□□□□ -1.42
DEPDC1B-203ENST00000505017 SEMA4GQ9NTN9 838 aa6.2□□□□□ -1.42
DEPDC1B-203ENST00000505017 POLKQ9UBT6 870 aa6.2□□□□□ -1.42
DEPDC1B-203ENST00000505017 TUBD1Q9UJT1 453 aa6.2□□□□□ -1.42
DEPDC1B-203ENST00000505017 C1orf167Q5SNV9 1468 aa6.2□□□□□ -1.42
DEPDC1B-203ENST00000505017 MSH6P52701 1360 aa6.19□□□□□ -1.42
DEPDC1B-203ENST00000505017 MYADML2A6NDP7 307 aa6.19□□□□□ -1.42
DEPDC1B-203ENST00000505017 ATF3P18847 181 aa6.19□□□□□ -1.42
DEPDC1B-203ENST00000505017 CD38P28907 300 aa6.19□□□□□ -1.42
DEPDC1B-203ENST00000505017 FAPQ12884 760 aa6.19□□□□□ -1.42
DEPDC1B-203ENST00000505017 CT47A1Q5JQC4 288 aaPredicted RBP6.19□□□□□ -1.42
DEPDC1B-203ENST00000505017 ZKSCAN2Q63HK3 967 aa6.19□□□□□ -1.42
DEPDC1B-203ENST00000505017 PPM1NQ8N819 430 aa6.19□□□□□ -1.42
DEPDC1B-203ENST00000505017 NUP133Q8WUM0 1156 aa6.19□□□□□ -1.42
DEPDC1B-203ENST00000505017 SLC9A6Q92581 669 aa6.19□□□□□ -1.42
DEPDC1B-203ENST00000505017 PTCD3Q96EY7 689 aaKnown RBP6.19□□□□□ -1.42
DEPDC1B-203ENST00000505017 TLR10Q9BXR5 811 aa6.19□□□□□ -1.42
DEPDC1B-203ENST00000505017 REXO4Q9GZR2 422 aaKnown RBP6.19□□□□□ -1.42
DEPDC1B-203ENST00000505017 CASS4Q9NQ75 786 aa6.19□□□□□ -1.42
DEPDC1B-203ENST00000505017 TBCCD1Q9NVR7 557 aa6.19□□□□□ -1.42
DEPDC1B-203ENST00000505017 IQSEC2Q5JU85 1478 aa6.19□□□□□ -1.42
DEPDC1B-203ENST00000505017 ZNF521Q96K83 1311 aa6.19□□□□□ -1.42
DEPDC1B-203ENST00000505017 SBNO1A3KN83 1393 aa6.18□□□□□ -1.42
DEPDC1B-203ENST00000505017 RTL1A6NKG5 1358 aa6.18□□□□□ -1.42
DEPDC1B-203ENST00000505017 XIRP1Q702N8 1843 aaKnown RBP6.18□□□□□ -1.42
DEPDC1B-203ENST00000505017 PHRF1Q9P1Y6 1649 aaKnown RBP6.18□□□□□ -1.42
DEPDC1B-203ENST00000505017 TRIM75PA6NK02 468 aa6.18□□□□□ -1.42
DEPDC1B-203ENST00000505017 U2AF1L5P0DN76 240 aaPredicted RBP6.18□□□□□ -1.42
DEPDC1B-203ENST00000505017 WASP42768 502 aa6.18□□□□□ -1.42
DEPDC1B-203ENST00000505017 MXRA7P84157 204 aa6.18□□□□□ -1.42
DEPDC1B-203ENST00000505017 U2AF1Q01081 240 aaKnown RBP eCLIP6.18□□□□□ -1.42
DEPDC1B-203ENST00000505017 KLF1Q13351 362 aaPredicted RBP6.18□□□□□ -1.42
DEPDC1B-203ENST00000505017 FLYWCH1Q4VC44 716 aa6.18□□□□□ -1.42
DEPDC1B-203ENST00000505017 FITM2Q8N6M3 262 aa6.18□□□□□ -1.42
DEPDC1B-203ENST00000505017 SSH3Q8TE77 659 aa6.18□□□□□ -1.42
DEPDC1B-203ENST00000505017 KCTD5Q9NXV2 234 aa6.18□□□□□ -1.42
DEPDC1B-203ENST00000505017 USP35Q9P2H5 1018 aa6.18□□□□□ -1.42
DEPDC1B-203ENST00000505017 INTUQ9ULD6 942 aa6.18□□□□□ -1.42
DEPDC1B-203ENST00000505017 FRMD4BQ9Y2L6 1034 aa6.18□□□□□ -1.42
DEPDC1B-203ENST00000505017 TMA7Q9Y2S6 64 aaKnown RBP6.18□□□□□ -1.42
DEPDC1B-203ENST00000505017 TRPM3Q9HCF6 1732 aaPredicted RBP6.18□□□□□ -1.42
DEPDC1B-203ENST00000505017 MARF1Q9Y4F3 1742 aaKnown RBP6.18□□□□□ -1.42
DEPDC1B-203ENST00000505017 FLT4P35916 1363 aa6.18□□□□□ -1.42
DEPDC1B-203ENST00000505017 FAM171A2A8MVW0 826 aa6.17□□□□□ -1.42
DEPDC1B-203ENST00000505017 APAF1O14727 1248 aa6.17□□□□□ -1.42
DEPDC1B-203ENST00000505017 KIAA0391O15091 583 aaKnown RBP6.17□□□□□ -1.42
DEPDC1B-203ENST00000505017 TEX33O43247 280 aa6.17□□□□□ -1.42
DEPDC1B-203ENST00000505017 LMO1P25800 156 aa6.17□□□□□ -1.42
DEPDC1B-203ENST00000505017 CTXN1P60606 82 aa6.17□□□□□ -1.42
DEPDC1B-203ENST00000505017 ERCC6LQ2NKX8 1250 aa6.17□□□□□ -1.42
DEPDC1B-203ENST00000505017 RNF219Q5W0B1 726 aaPredicted RBP6.17□□□□□ -1.42
DEPDC1B-203ENST00000505017 KIAA0895LQ68EN5 471 aa6.17□□□□□ -1.42
DEPDC1B-203ENST00000505017 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.17□□□□□ -1.42
DEPDC1B-203ENST00000505017 WDR63Q8IWG1 891 aa6.17□□□□□ -1.42
DEPDC1B-203ENST00000505017 KCNH5Q8NCM2 988 aa6.17□□□□□ -1.42
DEPDC1B-203ENST00000505017 TBC1D15Q8TC07 691 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms