RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 MFSD14BQ5SR56 506 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 WLSQ5T9L3 541 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 C16orf46Q6P387 395 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 KRT27Q7Z3Y8 459 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 ADGRA1Q86SQ6 560 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 NDUFAF2Q8N183 169 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 CAPSLQ8WWF8 208 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 CEP95Q96GE4 821 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 NT5C1BQ96P26 610 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 SMAD5Q99717 465 aaKnown RBP8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 REEP2Q9BRK0 252 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 HSPBP1Q9NZL4 362 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 KNL1Q8NG31 2342 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 FAM86B1E9PN63 330 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 SLC16A4O15374 487 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 DDAH1O94760 285 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 TJP3O95049 919 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 KRT75O95678 551 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 TTLL1O95922 423 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 RAG1P15918 1043 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 SMARCA1P28370 1054 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 PTPN4P29074 926 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 PBX1P40424 430 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 PSMC6P62333 389 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 CCDC15Q0P6D6 951 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 TROAPQ12815 778 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 UBAP2LQ14157 1087 aaKnown RBP8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 TFDP1Q14186 410 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 EFTUD2Q15029 972 aaKnown RBP eCLIP8.19□□□□□ -1.14e-9■■■□□ 15.4
ATP2C1-208ENST00000504948 HIF1AQ16665 826 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 LRRC8EQ6NSJ5 796 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 DNAAF3Q8N9W5 541 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 PDCD6IPQ8WUM4 868 aaKnown RBP8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 DEPDC1BQ8WUY9 529 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 RANBP17Q9H2T7 1088 aaKnown RBP8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 SNX25Q9H3E2 840 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 DSEQ9UL01 958 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 CCPG1Q9ULG6 757 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 AFG3L2Q9Y4W6 797 aa8.19□□□□□ -1.1
ATP2C1-208ENST00000504948 ARID1BQ8NFD5 2236 aaPredicted RBP8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 TRIM49D1C9J1S8 452 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 TLR3O15455 904 aaKnown RBP8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 ASAP2O43150 1006 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 TBX10O75333 385 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 CASP5P51878 434 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 POU5F1BQ06416 359 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 NCOA4Q13772 614 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 DOK7Q18PE1 504 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 TNS4Q8IZW8 715 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 RUSC1Q9BVN2 902 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 ZNF395Q9H8N7 513 aaPredicted RBP8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 DCP1AQ9NPI6 582 aaPredicted RBP8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 ATP11BQ9Y2G3 1177 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 ASCC3Q8N3C0 2202 aaKnown RBP8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 FAM187AA6NFU0 413 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 LRRIQ4A6NIV6 560 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 SAC3D1A6NKF1 404 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 SGPL1O95470 568 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 SRGAP2CP0DJJ0 459 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 SRGAP2BP0DMP2 458 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 GHRP10912 638 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 TFE3P19532 575 aaPredicted RBP8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 PON1P27169 355 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 BTDP43251 543 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 PTK7Q13308 1070 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 TRPC3Q13507 836 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 NAALADL2Q58DX5 795 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 TMC5Q6UXY8 1006 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 RIPOR1Q6ZS17 1223 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 ZBTB33Q86T24 672 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 SLC13A5Q86YT5 568 aaPredicted RBP8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 TBC1D23Q9NUY8 699 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 TRNAU1APQ9NX07 287 aaKnown RBP8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 GTSE1Q9NYZ3 720 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 MOSPD1Q9UJG1 213 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 KLHL33A6NCF5 533 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 TRIM43BA6NCK2 446 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 MFN2O95140 757 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 TPBGLP0DKB5 382 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 RPL10AP62906 217 aaKnown RBP8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 GRIK3Q13003 919 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 IRGCQ6NXR0 463 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 GALNT15Q8N3T1 639 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 HDAC11Q96DB2 347 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 SETDB2Q96T68 719 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 AGPAT1Q99943 283 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 HPS4Q9NQG7 708 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 SUCLA2Q9P2R7 463 aaPredicted RBP8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 HERC5Q9UII4 1024 aaKnown RBP8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 ARID1AO14497 2285 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 CYTH3O43739 400 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 LYNP07948 512 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 KCNA4P22459 653 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 GSSP48637 474 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 DHX34Q14147 1143 aaKnown RBP8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 PDIA6Q15084 440 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 CCDC81Q6ZN84 652 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 ANKRD23Q86SG2 305 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 KCTD6Q8NC69 237 aa8.18□□□□□ -1.1
ATP2C1-208ENST00000504948 ST13P5Q8NFI4 369 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms