RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 ITGB3P05106 788 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 POLR2BP30876 1174 aaKnown RBP12.87□□□□□ -0.35
MED28-203ENST00000503945 VIPR2P41587 438 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 SNRPFP62306 86 aaKnown RBP12.87□□□□□ -0.35
MED28-203ENST00000503945 TSPY1Q01534 308 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 MYO1EQ12965 1108 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 PUM1Q14671 1186 aaKnown RBP eCLIP12.87□□□□□ -0.35
MED28-203ENST00000503945 NFE2Q16621 373 aaPredicted RBP12.87□□□□□ -0.35
MED28-203ENST00000503945 DUOXA2Q1HG44 320 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 ZNF528Q3MIS6 628 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 ARHGAP15Q53QZ3 475 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 CNNM4Q6P4Q7 775 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 LRRTM3Q86VH5 581 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 MFSD6LQ8IWD5 586 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 YAF2Q8IY57 180 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 TMEM86AQ8N2M4 240 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 OR10T2Q8NGX3 314 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 SHKBP1Q8TBC3 707 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 SPPL2BQ8TCT7 592 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 HPS3Q969F9 1004 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 ANKRD36BP1Q96IX9 119 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 ACBD6Q9BR61 282 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 LRRC3Q9BY71 257 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 FGFBP2Q9BYJ0 223 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 TRPV4Q9HBA0 871 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 PDE11AQ9HCR9 933 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 LTB4R2Q9NPC1 389 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 RCOR1Q9UKL0 485 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 FBXO4Q9UKT5 387 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 ITGA11Q9UKX5 1188 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 MYH11P35749 1972 aa12.87□□□□□ -0.35
MED28-203ENST00000503945 PVALEFA0A1B0GWK0 134 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 DPYSL4O14531 572 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 EIF3DO15371 548 aaKnown RBP eCLIP12.86□□□□□ -0.35
MED28-203ENST00000503945 TNNC2P02585 160 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 TMEM191BP0C7N4 346 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 GDI1P31150 447 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 LHX1P48742 406 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 MYL7Q01449 175 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 FZD5Q13467 585 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 GRM2Q14416 872 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 TPRG1Q6ZUI0 275 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 UNC13DQ70J99 1090 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 ARID3BQ8IVW6 561 aaPredicted RBP12.86□□□□□ -0.35
MED28-203ENST00000503945 CEP57L1Q8IYX8 460 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 LRRC52Q8N7C0 313 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 C1orf127Q8N9H9 656 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 RDH13Q8NBN7 331 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 DEPDC1BQ8WUY9 529 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 DNASE1L2Q92874 299 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 DNAJC25Q9H1X3 360 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 ZNF334Q9HCZ1 680 aaPredicted RBP12.86□□□□□ -0.35
MED28-203ENST00000503945 TRPV5Q9NQA5 729 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 HEBP1Q9NRV9 189 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 INTS13Q9NVM9 706 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 GDAP2Q9NXN4 497 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 DDX43Q9NXZ2 648 aaKnown RBP12.86□□□□□ -0.35
MED28-203ENST00000503945 DLL3Q9NYJ7 618 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 HSPBP1Q9NZL4 362 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 PCDHB5Q9Y5E4 795 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 SNX9Q9Y5X1 595 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 DNAH14Q0VDD8 3507 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 CITO14578 2027 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 CEP250Q9BV73 2442 aa12.86□□□□□ -0.35
MED28-203ENST00000503945 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.85□□□□□ -0.35
MED28-203ENST00000503945 SHISA7A6NL88 538 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 HEPACAM2A8MVW5 462 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 SOAT2O75908 522 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 HAPLN1P10915 354 aaPredicted RBP12.85□□□□□ -0.35
MED28-203ENST00000503945 TNNI1P19237 187 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 FCARP24071 287 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 TARSP26639 723 aaKnown RBP12.85□□□□□ -0.35
MED28-203ENST00000503945 GABRR2P28476 465 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 MAGEA9P43362 315 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 AFMP43652 599 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 CDR1P51861 262 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 WNT7BP56706 349 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 DNM1Q05193 864 aaKnown RBP12.85□□□□□ -0.35
MED28-203ENST00000503945 BFSP1Q12934 665 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 RSPO4Q2I0M5 234 aaPredicted RBP12.85□□□□□ -0.35
MED28-203ENST00000503945 FAM26FQ5R3K3 315 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 RESP18Q5W5W9 173 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 VITQ6UXI7 678 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 EPM2AIP1Q7L775 607 aaPredicted RBP12.85□□□□□ -0.35
MED28-203ENST00000503945 DPH6Q7L8W6 267 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 HS2ST1Q7LGA3 356 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 GPIHBP1Q8IV16 184 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 PDCL2Q8N4E4 241 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 GLIS3Q8NEA6 775 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 CSGALNACT1Q8TDX6 532 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 GIPC2Q8TF65 315 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 ATRIPQ8WXE1 791 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 CLDN23Q96B33 292 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 HPDLQ96IR7 371 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 FNBP1Q96RU3 617 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 BLZF1Q9H2G9 400 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 ABI2Q9NYB9 513 aaPredicted RBP12.85□□□□□ -0.35
MED28-203ENST00000503945 GTF3C3Q9Y5Q9 886 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 GPR179Q6PRD1 2367 aa12.85□□□□□ -0.35
MED28-203ENST00000503945 NRG2O14511 850 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms