RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 UBXN11Q5T124 520 aa22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 DUPD1Q68J44 220 aa22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 ZBTB9Q96C00 473 aa22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 TRIM51Q9BSJ1 452 aa22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 RAB17Q9H0T7 212 aa22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 FAM114A2Q9NRY5 505 aa22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 STRIP2Q9ULQ0 834 aa22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 PIN4Q9Y237 131 aaKnown RBP22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 GOLGA6BA6NDN3 693 aa22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 O00370 1275 aa22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 VDRP11473 427 aa22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 GGCXP38435 758 aa22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 GSCP56915 257 aaPredicted RBP22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 MYO1EQ12965 1108 aa22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 TERF2Q15554 542 aa22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 TTC27Q6P3X3 843 aa22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 JAMLQ86YT9 394 aa22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 KATNAL2Q8IYT4 538 aa22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 ERP44Q9BS26 406 aa22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 TRIM6Q9C030 488 aaPredicted RBP22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 UPF3AQ9H1J1 476 aaKnown RBP22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 NEUROG2Q9H2A3 272 aa22.61■■□□□ 1.21
UBE2D3-216ENST00000503742 MICAL2O94851 1124 aa22.6■■□□□ 1.21
UBE2D3-216ENST00000503742 NDST1P52848 882 aa22.6■■□□□ 1.21
UBE2D3-216ENST00000503742 HLTFQ14527 1009 aaKnown RBP eCLIP22.6■■□□□ 1.21
UBE2D3-216ENST00000503742 CNGA2Q16280 664 aa22.6■■□□□ 1.21
UBE2D3-216ENST00000503742 CYP4A22Q5TCH4 519 aa22.6■■□□□ 1.21
UBE2D3-216ENST00000503742 MFSD14CQ5VZR4 134 aa22.6■■□□□ 1.21
UBE2D3-216ENST00000503742 ALS2CLQ60I27 953 aa22.6■■□□□ 1.21
UBE2D3-216ENST00000503742 RUNDC3BQ96NL0 473 aa22.6■■□□□ 1.21
UBE2D3-216ENST00000503742 MCEEQ96PE7 176 aa22.6■■□□□ 1.21
UBE2D3-216ENST00000503742 MTG1Q9BT17 334 aaPredicted RBP22.6■■□□□ 1.21
UBE2D3-216ENST00000503742 LRRC19Q9H756 370 aa22.6■■□□□ 1.21
UBE2D3-216ENST00000503742 TUBGCP4Q9UGJ1 667 aa22.6■■□□□ 1.21
UBE2D3-216ENST00000503742 PPEF2O14830 753 aa22.59■■□□□ 1.21
UBE2D3-216ENST00000503742 HMGCRP04035 888 aa22.59■■□□□ 1.21
UBE2D3-216ENST00000503742 COILP38432 576 aaPredicted RBP22.59■■□□□ 1.21
UBE2D3-216ENST00000503742 NKX3-2P78367 333 aa22.59■■□□□ 1.21
UBE2D3-216ENST00000503742 OGDHQ02218 1023 aa22.59■■□□□ 1.21
UBE2D3-216ENST00000503742 XKR4Q5GH76 650 aa22.59■■□□□ 1.21
UBE2D3-216ENST00000503742 GNASQ5JWF2 1037 aa22.59■■□□□ 1.21
UBE2D3-216ENST00000503742 TAF2Q6P1X5 1199 aa22.59■■□□□ 1.21
UBE2D3-216ENST00000503742 LRRC52Q8N7C0 313 aa22.59■■□□□ 1.21
UBE2D3-216ENST00000503742 BEST2Q8NFU1 509 aa22.59■■□□□ 1.21
UBE2D3-216ENST00000503742 KIAA1257Q9ULG3 409 aa22.59■■□□□ 1.21
UBE2D3-216ENST00000503742 HSPA9P38646 679 aaKnown RBP22.59■■□□□ 1.21
UBE2D3-216ENST00000503742 FNTAP49354 379 aa22.59■■□□□ 1.21
UBE2D3-216ENST00000503742 FLT3LGP49771 235 aa22.59■■□□□ 1.21
UBE2D3-216ENST00000503742 DRG2P55039 364 aaKnown RBP22.59■■□□□ 1.21
UBE2D3-216ENST00000503742 KCTD19Q17RG1 926 aaPredicted RBP22.59■■□□□ 1.21
UBE2D3-216ENST00000503742 CCDC137Q6PK04 289 aaKnown RBP22.59■■□□□ 1.21
UBE2D3-216ENST00000503742 NIPA2Q8N8Q9 360 aa22.59■■□□□ 1.21
UBE2D3-216ENST00000503742 C18orf25Q96B23 403 aaPredicted RBP22.59■■□□□ 1.21
UBE2D3-216ENST00000503742 HERPUD2Q9BSE4 406 aa22.59■■□□□ 1.21
UBE2D3-216ENST00000503742 AKAP5P24588 427 aa22.58■■□□□ 1.21
UBE2D3-216ENST00000503742 GPD2P43304 727 aa22.58■■□□□ 1.21
UBE2D3-216ENST00000503742 SGO2Q562F6 1265 aa22.58■■□□□ 1.21
UBE2D3-216ENST00000503742 DCUN1D2Q6PH85 259 aa22.58■■□□□ 1.21
UBE2D3-216ENST00000503742 IQCKQ8N0W5 287 aa22.58■■□□□ 1.21
UBE2D3-216ENST00000503742 EXD1Q8NHP7 514 aa22.58■■□□□ 1.21
UBE2D3-216ENST00000503742 MAIP1Q8WWC4 291 aa22.58■■□□□ 1.21
UBE2D3-216ENST00000503742 HEXIM2Q96MH2 286 aaKnown RBP22.58■■□□□ 1.21
UBE2D3-216ENST00000503742 CPXM1Q96SM3 734 aa22.58■■□□□ 1.21
UBE2D3-216ENST00000503742 TJP2Q9UDY2 1190 aa22.58■■□□□ 1.21
UBE2D3-216ENST00000503742 GTF2IRD1Q9UHL9 959 aa22.58■■□□□ 1.21
UBE2D3-216ENST00000503742 RASAL2Q9UJF2 1139 aa22.58■■□□□ 1.21
UBE2D3-216ENST00000503742 UBQLN1Q9UMX0 589 aaKnown RBP22.58■■□□□ 1.21
UBE2D3-216ENST00000503742 USTQ9Y2C2 406 aa22.58■■□□□ 1.21
UBE2D3-216ENST00000503742 SIGLEC16A6NMB1 481 aa22.58■■□□□ 1.2
UBE2D3-216ENST00000503742 GABRB2P47870 512 aa22.58■■□□□ 1.2
UBE2D3-216ENST00000503742 PIGHQ14442 188 aaPredicted RBP22.58■■□□□ 1.2
UBE2D3-216ENST00000503742 GLRA4Q5JXX5 417 aa22.58■■□□□ 1.2
UBE2D3-216ENST00000503742 LRRC38Q5VT99 294 aa22.58■■□□□ 1.2
UBE2D3-216ENST00000503742 C9orf57Q5W0N0 161 aa22.58■■□□□ 1.2
UBE2D3-216ENST00000503742 TSPAN18Q96SJ8 248 aa22.58■■□□□ 1.2
UBE2D3-216ENST00000503742 SH3GL2Q99962 352 aa22.58■■□□□ 1.2
UBE2D3-216ENST00000503742 NT5C1AQ9BXI3 368 aa22.58■■□□□ 1.2
UBE2D3-216ENST00000503742 DPH5Q9H2P9 285 aa22.58■■□□□ 1.2
UBE2D3-216ENST00000503742 WDR35Q9P2L0 1181 aa22.58■■□□□ 1.2
UBE2D3-216ENST00000503742 FAN1Q9Y2M0 1017 aa22.58■■□□□ 1.2
UBE2D3-216ENST00000503742 TMEM88BA6NKF7 163 aa22.57■■□□□ 1.2
UBE2D3-216ENST00000503742 PODXLO00592 558 aa22.57■■□□□ 1.2
UBE2D3-216ENST00000503742 ALDH1A1P00352 501 aa22.57■■□□□ 1.2
UBE2D3-216ENST00000503742 KCNE1P15382 129 aa22.57■■□□□ 1.2
UBE2D3-216ENST00000503742 KLF1Q13351 362 aaPredicted RBP22.57■■□□□ 1.2
UBE2D3-216ENST00000503742 XYLT1Q86Y38 959 aa22.57■■□□□ 1.2
UBE2D3-216ENST00000503742 RIN2Q8WYP3 895 aaPredicted RBP22.57■■□□□ 1.2
UBE2D3-216ENST00000503742 SLCO2A1Q92959 643 aa22.57■■□□□ 1.2
UBE2D3-216ENST00000503742 APOL6Q9BWW8 343 aa22.57■■□□□ 1.2
UBE2D3-216ENST00000503742 RNF39Q9H2S5 420 aa22.57■■□□□ 1.2
UBE2D3-216ENST00000503742 SMIM28A0A1B0GU29 152 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 F8VP50 259 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 SEPT4O43236 478 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 HSF2BPO75031 334 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 ERBB2P04626 1255 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 CYP3A5P20815 502 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 ZNF268Q14587 947 aaPredicted RBP22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 NBPF20Q3BBV1 942 aa22.56■■□□□ 1.2
UBE2D3-216ENST00000503742 LCLAT1Q6UWP7 414 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms