RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 RPS6KC1Q96S38 1066 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 LRMDAQ9H2I8 198 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 ARHGEF3Q9NR81 526 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 ZNF277Q9NRM2 450 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 DLGAP2Q9P1A6 1054 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 HDAC6Q9UBN7 1215 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 SERPINB13Q9UIV8 391 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 RWDD2AQ9UIY3 292 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 SCINQ9Y6U3 715 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 TSPAN11A1L157 253 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 MACROD2A1Z1Q3 448 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 MIF4GDA9UHW6 222 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 MGEA5O60502 916 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 CDH16O75309 829 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 BAIAP3O94812 1187 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 UNC5CO95185 931 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 MARK3P27448 753 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 RPL5P46777 297 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 TMED10P49755 219 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 FXR1P51114 621 aaKnown RBP eCLIP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 TUBA1BP68363 451 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 CCT2P78371 535 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 CAV1Q03135 178 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 CALCOCO2Q13137 446 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 PAK1Q13153 545 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 ITGB3BPQ13352 177 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 ACVR2BQ13705 512 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 RPS6KA1Q15418 735 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 BRDTQ58F21 947 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 TUBA1AQ71U36 451 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 MARK2Q7KZI7 788 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 MIER3Q7Z3K6 550 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 NUP93Q8N1F7 819 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 ZBTB8BQ8NAP8 495 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 KIAA0895Q8NCT3 520 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 NCOA7Q8NI08 942 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 SLC35B2Q8TB61 432 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 AGAP11Q8TF27 550 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 BTBD9Q96Q07 612 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 NUDCD1Q96RS6 583 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 MMS19Q96T76 1030 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 PDCD2LQ9BRP1 358 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 MUC3BQ9H195 1237 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 PABPC3Q9H361 631 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 ETNK1Q9HBU6 452 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 IL1RAPL2Q9NP60 686 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 UBN1Q9NPG3 1134 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 SEC31BQ9NQW1 1179 aa2.95□□□□□ -1.94
NEDD4-204ENST00000503468 STX18Q9P2W9 335 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 CPSF3Q9UKF6 684 aaKnown RBP2.95□□□□□ -1.94
NEDD4-204ENST00000503468 GLTPD2A6NH11 291 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 F6X3S4 739 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 H3BNX3 289 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 MAP3K7O43318 606 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 PHF2O75151 1096 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 ITGA2BP08514 1039 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 VEGFAP15692 232 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-204ENST00000503468 ZNF12P17014 697 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 CCNE1P24864 410 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 ADORA1P30542 326 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 HOXA9P31269 272 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 CETN2P41208 172 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 EPS15P42566 896 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 ZAP70P43403 619 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 ADKP55263 362 aaKnown RBP2.94□□□□□ -1.94
NEDD4-204ENST00000503468 ADARP55265 1226 aaKnown RBP2.94□□□□□ -1.94
NEDD4-204ENST00000503468 NOP14P78316 857 aaKnown RBP2.94□□□□□ -1.94
NEDD4-204ENST00000503468 CENPCQ03188 943 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 DHX34Q14147 1143 aaKnown RBP2.94□□□□□ -1.94
NEDD4-204ENST00000503468 SKIDA1Q1XH10 827 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 SLC39A4Q6P5W5 647 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 PADI6Q6TGC4 694 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 PIGWQ7Z7B1 504 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 GALNT13Q8IUC8 556 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 CNTN4Q8IWV2 1026 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 ZDHHC14Q8IZN3 488 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 SVIPQ8NHG7 77 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 OIT3Q8WWZ8 545 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 JADE3Q92613 823 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 ARL8AQ96BM9 186 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 FMO2Q99518 471 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 UBAC1Q9BSL1 405 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 IRF2BPLQ9H1B7 796 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 CARD9Q9H257 536 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 PLEKHA5Q9HAU0 1116 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 TBC1D23Q9NUY8 699 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 DNAAF2Q9NVR5 837 aaKnown RBP2.94□□□□□ -1.94
NEDD4-204ENST00000503468 COMMD8Q9NX08 183 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 LGALS13Q9UHV8 139 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 FAF1Q9UNN5 650 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-204ENST00000503468 M0QZQ0 153 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 WNT10BO00744 389 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 DKC1O60832 514 aaKnown RBP eCLIP2.94□□□□□ -1.94
NEDD4-204ENST00000503468 ABLIM3O94929 683 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 CYP11B2P19099 503 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 DRD4P21917 467 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 SP100P23497 879 aaPredicted RBP2.94□□□□□ -1.94
NEDD4-204ENST00000503468 RPL13P26373 211 aaKnown RBP2.94□□□□□ -1.94
NEDD4-204ENST00000503468 MMP13P45452 471 aa2.94□□□□□ -1.94
NEDD4-204ENST00000503468 HSPA13P48723 471 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms