RNA–Protein interactions for RNA: ENST00000503258.5

PDE4D-210, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-210ENST00000503258 EDEM2Q9BV94 578 aa8.38□□□□□ -1.07
PDE4D-210ENST00000503258 CPSF3Q9UKF6 684 aaKnown RBP8.38□□□□□ -1.07
PDE4D-210ENST00000503258 DOCK6Q96HP0 2047 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 SRRM3A6NNA2 597 aaPredicted RBP8.37□□□□□ -1.07
PDE4D-210ENST00000503258 DPYSL4O14531 572 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 OGTO15294 1046 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 NFATC1O95644 943 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 SMTNP53814 917 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 MCCD1P59942 119 aaPredicted RBP8.37□□□□□ -1.07
PDE4D-210ENST00000503258 SNRPFP62306 86 aaKnown RBP8.37□□□□□ -1.07
PDE4D-210ENST00000503258 HMGN5P82970 282 aaKnown RBP8.37□□□□□ -1.07
PDE4D-210ENST00000503258 FAM160A1Q05DH4 1040 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 EOGTQ5NDL2 527 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 TMEM150AQ86TG1 271 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 CEP57Q86XR8 500 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 ARID3BQ8IVW6 561 aaPredicted RBP8.37□□□□□ -1.07
PDE4D-210ENST00000503258 TOP6BLQ8N6T0 577 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 NSUN7Q8NE18 718 aaKnown RBP8.37□□□□□ -1.07
PDE4D-210ENST00000503258 ZNF560Q96MR9 790 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 STRA6Q9BX79 667 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 ARRDC1-AS1Q9H2J1 176 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 CAPN10Q9HC96 672 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 OTOGLQ3ZCN5 2332 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 C10orf142B7Z368 130 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 CDX4O14627 284 aaPredicted RBP8.37□□□□□ -1.07
PDE4D-210ENST00000503258 LZTS3O60299 673 aaPredicted RBP8.37□□□□□ -1.07
PDE4D-210ENST00000503258 GJB3O75712 270 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 BRCC3P46736 316 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 GRM2Q14416 872 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 DUOXA1Q1HG43 343 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 SV2CQ496J9 727 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 METTL23Q86XA0 190 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 SYT12Q8IV01 421 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 FAM124BQ9H5Z6 455 aaPredicted RBP8.37□□□□□ -1.07
PDE4D-210ENST00000503258 IL37Q9NZH6 218 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 SEL1LQ9UBV2 794 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 NOL7Q9UMY1 257 aaKnown RBP8.37□□□□□ -1.07
PDE4D-210ENST00000503258 RALGAPA1Q6GYQ0 2036 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 NUP205Q92621 2012 aa8.37□□□□□ -1.07
PDE4D-210ENST00000503258 A0A0B4J269 797 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 HOXC11O43248 304 aaPredicted RBP8.36□□□□□ -1.07
PDE4D-210ENST00000503258 SERPINF2P08697 491 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 GTF2BQ00403 316 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 ZNF252P-AS1Q0IIN9 211 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 STRN3Q13033 797 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 MAPRE1Q15691 268 aaKnown RBP8.36□□□□□ -1.07
PDE4D-210ENST00000503258 EML3Q32P44 896 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 EARS2Q5JPH6 523 aaKnown RBP8.36□□□□□ -1.07
PDE4D-210ENST00000503258 C9orf57Q5W0N0 161 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 VSTM1Q6UX27 236 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 PHTF2Q8N3S3 785 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 SPACA7Q96KW9 195 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 MARK1Q9P0L2 795 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 PILRBQ9UKJ0 227 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 ZNF292O60281 2723 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 BMP15O95972 392 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 MCM4P33991 863 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 GAB4Q2WGN9 574 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 GPR158Q5T848 1215 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 OVOS1Q6IE37 1185 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 RINT1Q6NUQ1 792 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 FAM171BQ6P995 826 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 TSSK4Q6SA08 328 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 PRR23BQ6ZRT6 265 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 NOSTRINQ8IVI9 506 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 ING5Q8WYH8 240 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 GJA10Q969M2 543 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 CD248Q9HCU0 757 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 KMT5AQ9NQR1 393 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 SUSD2Q9UGT4 822 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 NDRG2Q9UN36 371 aaKnown RBP8.36□□□□□ -1.07
PDE4D-210ENST00000503258 DNM3Q9UQ16 869 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 CEP192Q8TEP8 1941 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 TTLL13PA6NNM8 815 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 GABRDO14764 452 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 NOP14P78316 857 aaKnown RBP8.36□□□□□ -1.07
PDE4D-210ENST00000503258 TRIM29Q14134 588 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 POSTNQ15063 836 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 PON2Q15165 354 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 SAFBQ15424 915 aaKnown RBP eCLIP8.36□□□□□ -1.07
PDE4D-210ENST00000503258 SURF1Q15526 300 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 ARMCX5Q6P1M9 558 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 USP13Q92995 863 aaPredicted RBP8.36□□□□□ -1.07
PDE4D-210ENST00000503258 ZSCAN31Q96LW9 406 aaPredicted RBP8.36□□□□□ -1.07
PDE4D-210ENST00000503258 FBRSQ9HAH7 460 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 NCOA5Q9HCD5 579 aaKnown RBP8.36□□□□□ -1.07
PDE4D-210ENST00000503258 TDP1Q9NUW8 608 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 PCDHB5Q9Y5E4 795 aa8.36□□□□□ -1.07
PDE4D-210ENST00000503258 MYO7AQ13402 2215 aa8.35□□□□□ -1.07
PDE4D-210ENST00000503258 MYL4P12829 197 aa8.35□□□□□ -1.07
PDE4D-210ENST00000503258 ATF6P18850 670 aa8.35□□□□□ -1.07
PDE4D-210ENST00000503258 SLC12A3P55017 1021 aa8.35□□□□□ -1.07
PDE4D-210ENST00000503258 LILRA4P59901 499 aa8.35□□□□□ -1.07
PDE4D-210ENST00000503258 TXNDC11Q6PKC3 985 aa8.35□□□□□ -1.07
PDE4D-210ENST00000503258 CYP2U1Q7Z449 544 aa8.35□□□□□ -1.07
PDE4D-210ENST00000503258 DIS3L2Q8IYB7 885 aaKnown RBP8.35□□□□□ -1.07
PDE4D-210ENST00000503258 PDZD8Q8NEN9 1154 aa8.35□□□□□ -1.07
PDE4D-210ENST00000503258 WHAMMQ8TF30 809 aa8.35□□□□□ -1.07
PDE4D-210ENST00000503258 C8orf48Q96LL4 319 aa8.35□□□□□ -1.07
PDE4D-210ENST00000503258 LRRC3BQ96PB8 259 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms