RNA–Protein interactions for RNA: ENST00000503197.5

MBD4-204, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-204ENST00000503197 KIAA0319Q5VV43 1072 aa16.21■□□□□ 0.19
MBD4-204ENST00000503197 ACOT1Q86TX2 421 aa16.21■□□□□ 0.19
MBD4-204ENST00000503197 ZNF677Q86XU0 584 aa16.21■□□□□ 0.19
MBD4-204ENST00000503197 HERC6Q8IVU3 1022 aa16.21■□□□□ 0.19
MBD4-204ENST00000503197 C12orf29Q8N999 325 aa16.21■□□□□ 0.19
MBD4-204ENST00000503197 SLC9A7Q96T83 725 aa16.21■□□□□ 0.19
MBD4-204ENST00000503197 LPIN3Q9BQK8 851 aa16.21■□□□□ 0.19
MBD4-204ENST00000503197 RTP3Q9BQQ7 232 aa16.21■□□□□ 0.19
MBD4-204ENST00000503197 SNX25Q9H3E2 840 aa16.21■□□□□ 0.19
MBD4-204ENST00000503197 NAGPAQ9UK23 515 aa16.21■□□□□ 0.19
MBD4-204ENST00000503197 PCDHB8Q9UN66 801 aa16.21■□□□□ 0.19
MBD4-204ENST00000503197 LAMA3Q16787 3333 aa16.21■□□□□ 0.19
MBD4-204ENST00000503197 A0A0U1RQJ8 604 aa16.2■□□□□ 0.18
MBD4-204ENST00000503197 THAP12O43422 761 aa16.2■□□□□ 0.18
MBD4-204ENST00000503197 EFEMP2O95967 443 aa16.2■□□□□ 0.18
MBD4-204ENST00000503197 LINC00271P0C7V0 271 aa16.2■□□□□ 0.18
MBD4-204ENST00000503197 SSTR3P32745 418 aaPredicted RBP16.2■□□□□ 0.18
MBD4-204ENST00000503197 ALDH7A1P49419 539 aaKnown RBP16.2■□□□□ 0.18
MBD4-204ENST00000503197 KCNT2Q6UVM3 1135 aa16.2■□□□□ 0.18
MBD4-204ENST00000503197 ZSCAN30Q86W11 494 aa16.2■□□□□ 0.18
MBD4-204ENST00000503197 CRYBG2Q8N1P7 616 aa16.2■□□□□ 0.18
MBD4-204ENST00000503197 PHOSPHO2Q8TCD6 241 aa16.2■□□□□ 0.18
MBD4-204ENST00000503197 ATRIPQ8WXE1 791 aa16.2■□□□□ 0.18
MBD4-204ENST00000503197 DDX43Q9NXZ2 648 aaKnown RBP16.2■□□□□ 0.18
MBD4-204ENST00000503197 PUF60Q9UHX1 559 aaKnown RBP16.2■□□□□ 0.18
MBD4-204ENST00000503197 PPP2R2CQ9Y2T4 447 aa16.2■□□□□ 0.18
MBD4-204ENST00000503197 CHD9Q3L8U1 2897 aa16.2■□□□□ 0.18
MBD4-204ENST00000503197 USP27XA6NNY8 438 aa16.2■□□□□ 0.18
MBD4-204ENST00000503197 CD19P15391 556 aa16.2■□□□□ 0.18
MBD4-204ENST00000503197 ATP2A2P16615 1042 aaKnown RBP16.2■□□□□ 0.18
MBD4-204ENST00000503197 TYMPP19971 482 aa16.2■□□□□ 0.18
MBD4-204ENST00000503197 TNFAIP3P21580 790 aa16.2■□□□□ 0.18
MBD4-204ENST00000503197 ACAT1P24752 427 aaKnown RBP16.2■□□□□ 0.18
MBD4-204ENST00000503197 TKTP29401 623 aaKnown RBP16.2■□□□□ 0.18
MBD4-204ENST00000503197 LHX1P48742 406 aa16.2■□□□□ 0.18
MBD4-204ENST00000503197 CCDC142Q17RM4 750 aa16.2■□□□□ 0.18
MBD4-204ENST00000503197 VPS36Q86VN1 386 aa16.2■□□□□ 0.18
MBD4-204ENST00000503197 DNAAF5Q86Y56 855 aa16.2■□□□□ 0.18
MBD4-204ENST00000503197 HEXIM2Q96MH2 286 aaKnown RBP16.2■□□□□ 0.18
MBD4-204ENST00000503197 TAS2R14Q9NYV8 317 aa16.2■□□□□ 0.18
MBD4-204ENST00000503197 DSEQ9UL01 958 aa16.2■□□□□ 0.18
MBD4-204ENST00000503197 CHD7Q9P2D1 2997 aa16.2■□□□□ 0.18
MBD4-204ENST00000503197 TRAPPC3O43617 180 aa16.19■□□□□ 0.18
MBD4-204ENST00000503197 ATP2C2O75185 946 aa16.19■□□□□ 0.18
MBD4-204ENST00000503197 FUT10Q6P4F1 479 aa16.19■□□□□ 0.18
MBD4-204ENST00000503197 ALKBH5Q6P6C2 394 aaKnown RBP16.19■□□□□ 0.18
MBD4-204ENST00000503197 SPATA18Q8TC71 538 aa16.19■□□□□ 0.18
MBD4-204ENST00000503197 IGSF21Q96ID5 467 aa16.19■□□□□ 0.18
MBD4-204ENST00000503197 ZBED2Q9BTP6 218 aa16.19■□□□□ 0.18
MBD4-204ENST00000503197 VN1R3Q9BXE9 311 aa16.19■□□□□ 0.18
MBD4-204ENST00000503197 SEPT11Q9NVA2 429 aaKnown RBP16.19■□□□□ 0.18
MBD4-204ENST00000503197 KIAA1257Q9ULG3 409 aa16.19■□□□□ 0.18
MBD4-204ENST00000503197 INSL6Q9Y581 213 aa16.19■□□□□ 0.18
MBD4-204ENST00000503197 FAM170AA1A519 330 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 RCCD1A6NED2 376 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 O00370 1275 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 VDRP11473 427 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 PSMC1P62191 440 aaKnown RBP16.18■□□□□ 0.18
MBD4-204ENST00000503197 FAM171A1Q5VUB5 890 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 SP7Q8TDD2 431 aaPredicted RBP16.18■□□□□ 0.18
MBD4-204ENST00000503197 B3GALT6Q96L58 329 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 MTIF3Q9H2K0 278 aaKnown RBP16.18■□□□□ 0.18
MBD4-204ENST00000503197 PCDHGC3Q9UN70 934 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 TFR2Q9UP52 801 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 SF3B1O75533 1304 aaKnown RBP eCLIP16.18■□□□□ 0.186e-12■■■■■ 56
MBD4-204ENST00000503197 LCHNA4D1U4 455 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 CYP1A1P04798 512 aaPredicted RBP16.18■□□□□ 0.18
MBD4-204ENST00000503197 CCDC175P0C221 793 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 FGFR3P22607 806 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 SHHQ15465 462 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 SPA17Q15506 151 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 SGO2Q562F6 1265 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 SPOUT1Q5T280 376 aaKnown RBP16.18■□□□□ 0.18
MBD4-204ENST00000503197 OVOS1Q6IE37 1185 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 TAS1R1Q7RTX1 841 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 CCAR2Q8N163 923 aaKnown RBP16.18■□□□□ 0.18
MBD4-204ENST00000503197 SLC39A11Q8N1S5 342 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 COLGALT1Q8NBJ5 622 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 B3GALNT2Q8NCR0 500 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 CYFIP2Q96F07 1278 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 ZNF558Q96NG5 402 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 RAD9AQ99638 391 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 KCND1Q9NSA2 647 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 FAM49BQ9NUQ9 324 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.18■□□□□ 0.18
MBD4-204ENST00000503197 PCDHA13Q9Y5I0 950 aa16.18■□□□□ 0.18
MBD4-204ENST00000503197 ARHGEF37A1IGU5 675 aa16.17■□□□□ 0.18
MBD4-204ENST00000503197 SYN3O14994 580 aa16.17■□□□□ 0.18
MBD4-204ENST00000503197 OAZ2O95190 189 aa16.17■□□□□ 0.18
MBD4-204ENST00000503197 UNGP13051 313 aaPredicted RBP16.17■□□□□ 0.18
MBD4-204ENST00000503197 LAG3P18627 525 aa16.17■□□□□ 0.18
MBD4-204ENST00000503197 YWHAHQ04917 246 aaPredicted RBP16.17■□□□□ 0.18
MBD4-204ENST00000503197 CNGA2Q16280 664 aa16.17■□□□□ 0.18
MBD4-204ENST00000503197 CLEC16AQ2KHT3 1053 aa16.17■□□□□ 0.18
MBD4-204ENST00000503197 CCDC122Q5T0U0 273 aa16.17■□□□□ 0.18
MBD4-204ENST00000503197 PPP1R26Q5T8A7 1209 aaPredicted RBP16.17■□□□□ 0.18
MBD4-204ENST00000503197 METTL23Q86XA0 190 aa16.17■□□□□ 0.18
MBD4-204ENST00000503197 PASD1Q8IV76 773 aa16.17■□□□□ 0.18
MBD4-204ENST00000503197 REXO1L1PQ8IX06 675 aa16.17■□□□□ 0.18
MBD4-204ENST00000503197 RNF168Q8IYW5 571 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms