RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	PAX3	P23760	479 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	IGFBP6	P24592	240 aa	Predicted RBP	11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	CASP1	P29466	404 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	HOXA9	P31269	272 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	SYK	P43405	635 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	CYP2J2	P51589	502 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	UVSSA	Q2YD98	709 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	PABPC1L	Q4VXU2	614 aa	Known RBP	11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	INTS6L	Q5JSJ4	861 aa	Known RBP	11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	C9orf57	Q5W0N0	161 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	IQCE	Q6IPM2	695 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	LILRA6	Q6PI73	481 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810		Q6ZVU0	165 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	NT5DC4	Q86YG4	428 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	UBALD2	Q8IYN6	164 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	GRAMD1C	Q8IYS0	662 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	TMEM130	Q8N3G9	435 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	FSIP1	Q8NA03	581 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	ZNF461	Q8TAF7	563 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	PBXIP1	Q96AQ6	731 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	C7orf25	Q9BPX7	421 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	CBWD1	Q9BRT8	395 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	OXCT2	Q9BYC2	517 aa	Predicted RBP	11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	FGFBP2	Q9BYJ0	223 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	USP25	Q9UHP3	1055 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	DSE	Q9UL01	958 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	STYXL1	Q9Y6J8	313 aa		11.51	□□□□□ -0.57
CDK11A-222	ENST00000498810	ZNF233	A6NK53	670 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	OR6C75	A6NL08	312 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810		H3BM21	787 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810		M0QZQ0	153 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	ITGB3	P05106	788 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	SLFN14	P0C7P3	912 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	BMP2	P12643	396 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	CMA1	P23946	247 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	ADSS	P30520	456 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	PNPLA4	P41247	253 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	NUCB2	P80303	420 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	POU5F1	Q01860	360 aa	Known RBP	11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	ADCY1	Q08828	1119 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	BFSP1	Q12934	665 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	PLD1	Q13393	1074 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	CUL4B	Q13620	913 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	SURF1	Q15526	300 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	TPGS2	Q68CL5	300 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	SLC8B1	Q6J4K2	584 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	CD300LG	Q6UXG3	332 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	RTL10	Q7L3V2	364 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	THEM5	Q8N1Q8	247 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	FEZF2	Q8TBJ5	459 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	ZNF707	Q96C28	371 aa	Predicted RBP	11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	SENP8	Q96LD8	212 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	PGLYRP2	Q96PD5	576 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	FNBP1	Q96RU3	617 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	STRA6	Q9BX79	667 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	RHOBTB2	Q9BYZ6	727 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	SLC39A2	Q9NP94	309 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	C11orf16	Q9NQ32	467 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	PGPEP1	Q9NXJ5	209 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	HSPBP1	Q9NZL4	362 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	INSL5	Q9Y5Q6	135 aa		11.5	□□□□□ -0.57
CDK11A-222	ENST00000498810	KMT2E	Q8IZD2	1858 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	ZNF638	Q14966	1978 aa	Known RBP	11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	PVALEF	A0A1B0GWK0	134 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	CYB561D2	O14569	222 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	PPEF2	O14830	753 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	ATF2	P15336	505 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	TYMP	P19971	482 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	POLR2B	P30876	1174 aa	Known RBP	11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	LILRA4	P59901	499 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	NTHL1	P78549	312 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	DHX9	Q08211	1270 aa	Known RBP	11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	TDG	Q13569	410 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	ZBTB6	Q15916	424 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	CNNM4	Q6P4Q7	775 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	RSPO2	Q6UXX9	243 aa	Predicted RBP	11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	HFE2	Q6ZVN8	426 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	PDZD4	Q76G19	769 aa	Predicted RBP	11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	EFCAB13	Q8IY85	973 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	GLIS3	Q8NEA6	775 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	FAM200A	Q8TCP9	573 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	ING5	Q8WYH8	240 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	CHAMP1	Q96JM3	812 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	CORO1B	Q9BR76	489 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	MTMR12	Q9C0I1	747 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	GDPD2	Q9HCC8	539 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	KIAA1586	Q9HCI6	787 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	IGSF9	Q9P2J2	1179 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	AFF4	Q9UHB7	1163 aa	Known RBP	11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	RAPGEFL1	Q9UHV5	662 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	ITGA11	Q9UKX5	1188 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	AGAP1	Q9UPQ3	857 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	MRPS23	Q9Y3D9	190 aa	Known RBP	11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	TECTA	O75443	2155 aa		11.49	□□□□□ -0.57
CDK11A-222	ENST00000498810	KPNA7	A9QM74	516 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	CLIC2	O15247	247 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	HUS1	O60921	280 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	KIF20A	O95235	890 aa		11.48	□□□□□ -0.57
CDK11A-222	ENST00000498810	MYL1	P05976	194 aa		11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms