RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 KCND1Q9NSA2 647 aa17.32■□□□□ 0.36
LMNA-217ENST00000498722 SPTLC3Q9NUV7 552 aa17.32■□□□□ 0.36
LMNA-217ENST00000498722 CAPN11Q9UMQ6 739 aa17.32■□□□□ 0.36
LMNA-217ENST00000498722 BACE2Q9Y5Z0 518 aa17.32■□□□□ 0.36
LMNA-217ENST00000498722 CUL9Q8IWT3 2517 aa17.32■□□□□ 0.36
LMNA-217ENST00000498722 MYH10P35580 1976 aa17.31■□□□□ 0.36
LMNA-217ENST00000498722 A0A1W2PQJ5 194 aa17.31■□□□□ 0.36
LMNA-217ENST00000498722 GRXCR2A6NFK2 248 aa17.31■□□□□ 0.36
LMNA-217ENST00000498722 CPB1P15086 417 aa17.31■□□□□ 0.36
LMNA-217ENST00000498722 TRIM21P19474 475 aaKnown RBP17.31■□□□□ 0.36
LMNA-217ENST00000498722 TRPC3Q13507 836 aa17.31■□□□□ 0.36
LMNA-217ENST00000498722 LIN9Q5TKA1 542 aa17.31■□□□□ 0.36
LMNA-217ENST00000498722 SYCE2Q6PIF2 218 aa17.31■□□□□ 0.36
LMNA-217ENST00000498722 TMC5Q6UXY8 1006 aa17.31■□□□□ 0.36
LMNA-217ENST00000498722 TRAPPC11Q7Z392 1133 aa17.31■□□□□ 0.36
LMNA-217ENST00000498722 FAM186BQ8IYM0 893 aa17.31■□□□□ 0.36
LMNA-217ENST00000498722 KREMEN2Q8NCW0 462 aa17.31■□□□□ 0.36
LMNA-217ENST00000498722 ZNF397Q8NF99 534 aaPredicted RBP17.31■□□□□ 0.36
LMNA-217ENST00000498722 ADAMTS19Q8TE59 1207 aa17.31■□□□□ 0.36
LMNA-217ENST00000498722 SIX4Q9UIU6 781 aa17.31■□□□□ 0.36
LMNA-217ENST00000498722 FBXL5Q9UKA1 691 aa17.31■□□□□ 0.36
LMNA-217ENST00000498722 LUC7L2Q9Y383 392 aaKnown RBP17.31■□□□□ 0.36
LMNA-217ENST00000498722 USP15Q9Y4E8 981 aaPredicted RBP17.31■□□□□ 0.36
LMNA-217ENST00000498722 DENND4AQ7Z401 1863 aa17.31■□□□□ 0.36
LMNA-217ENST00000498722 LRRIQ3A6PVS8 624 aaPredicted RBP17.3■□□□□ 0.36
LMNA-217ENST00000498722 MAPK13O15264 365 aa17.3■□□□□ 0.36
LMNA-217ENST00000498722 AKAP3O75969 853 aa17.3■□□□□ 0.36
LMNA-217ENST00000498722 AFPP02771 609 aaKnown RBP17.3■□□□□ 0.36
LMNA-217ENST00000498722 WEE2P0C1S8 567 aa17.3■□□□□ 0.36
LMNA-217ENST00000498722 BMP1P13497 986 aa17.3■□□□□ 0.36
LMNA-217ENST00000498722 TYMPP19971 482 aa17.3■□□□□ 0.36
LMNA-217ENST00000498722 SCARA3Q6AZY7 606 aa17.3■□□□□ 0.36
LMNA-217ENST00000498722 RSPO2Q6UXX9 243 aaPredicted RBP17.3■□□□□ 0.36
LMNA-217ENST00000498722 LRRC52Q8N7C0 313 aa17.3■□□□□ 0.36
LMNA-217ENST00000498722 PARD3BQ8TEW8 1205 aa17.3■□□□□ 0.36
LMNA-217ENST00000498722 HPDLQ96IR7 371 aa17.3■□□□□ 0.36
LMNA-217ENST00000498722 EDEM3Q9BZQ6 932 aa17.3■□□□□ 0.36
LMNA-217ENST00000498722 MMRN2Q9H8L6 949 aa17.3■□□□□ 0.36
LMNA-217ENST00000498722 ABHD10Q9NUJ1 306 aa17.3■□□□□ 0.36
LMNA-217ENST00000498722 DSEQ9UL01 958 aa17.3■□□□□ 0.36
LMNA-217ENST00000498722 SNX9Q9Y5X1 595 aa17.3■□□□□ 0.36
LMNA-217ENST00000498722 NCOR1O75376 2440 aa17.29■□□□□ 0.36
LMNA-217ENST00000498722 HUS1O60921 280 aa17.29■□□□□ 0.36
LMNA-217ENST00000498722 FECHP22830 423 aa17.29■□□□□ 0.36
LMNA-217ENST00000498722 KRT9P35527 623 aa17.29■□□□□ 0.36
LMNA-217ENST00000498722 VAMP7P51809 220 aa17.29■□□□□ 0.36
LMNA-217ENST00000498722 DLG4P78352 724 aa17.29■□□□□ 0.36
LMNA-217ENST00000498722 ROR1Q01973 937 aa17.29■□□□□ 0.36
LMNA-217ENST00000498722 ITIH3Q06033 890 aa17.29■□□□□ 0.36
LMNA-217ENST00000498722 GOLGA8FQ08AF8 430 aa17.29■□□□□ 0.36
LMNA-217ENST00000498722 GOLGA8DPQ0D2H9 430 aa17.29■□□□□ 0.36
LMNA-217ENST00000498722 KCNH2Q12809 1159 aa17.29■□□□□ 0.36
LMNA-217ENST00000498722 RAB33AQ14088 237 aa17.29■□□□□ 0.36
LMNA-217ENST00000498722 WSCD1Q658N2 575 aa17.29■□□□□ 0.36
LMNA-217ENST00000498722 INTS8Q75QN2 995 aaKnown RBP17.29■□□□□ 0.36
LMNA-217ENST00000498722 TMEM139Q8IV31 216 aa17.29■□□□□ 0.36
LMNA-217ENST00000498722 NEK11Q8NG66 645 aa17.29■□□□□ 0.36
LMNA-217ENST00000498722 OR8K1Q8NGG5 319 aa17.29■□□□□ 0.36
LMNA-217ENST00000498722 PLEKHO2Q8TD55 490 aa17.29■□□□□ 0.36
LMNA-217ENST00000498722 ZNF516Q92618 1163 aa17.29■□□□□ 0.36
LMNA-217ENST00000498722 PLEKHA4Q9H4M7 779 aa17.29■□□□□ 0.36
LMNA-217ENST00000498722 CDH22Q9UJ99 828 aa17.29■□□□□ 0.36
LMNA-217ENST00000498722 SIK3Q9Y2K2 1263 aa17.29■□□□□ 0.36
LMNA-217ENST00000498722 CCDC195A0A1B0GUA6 201 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 PRRG1O14668 218 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 RFPL2O75678 378 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 OAZ2O95190 189 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 OR4Q2P0C623 313 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 TRIM49P0CI25 452 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 TRIM49CP0CI26 452 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 ELF1P32519 619 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 AP3M2P53677 418 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 ZBED6P86452 979 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 MRPL58Q14197 206 aaKnown RBP17.28■□□□□ 0.36
LMNA-217ENST00000498722 CBX2Q14781 532 aaPredicted RBP17.28■□□□□ 0.36
LMNA-217ENST00000498722 SMAD2Q15796 467 aaKnown RBP17.28■□□□□ 0.36
LMNA-217ENST00000498722 PPM1LQ5SGD2 360 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 SLC8B1Q6J4K2 584 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 LILRA6Q6PI73 481 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 TMTC1Q8IUR5 882 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 THEM5Q8N1Q8 247 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 CXorf38Q8TB03 319 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 TMC2Q8TDI7 906 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 RIPOR3Q96MK2 946 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 NECAB3Q96P71 396 aaPredicted RBP17.28■□□□□ 0.36
LMNA-217ENST00000498722 MMS19Q96T76 1030 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 TTYH3Q9C0H2 523 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 S1PR5Q9H228 398 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 ADAM7Q9H2U9 754 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 PIDD1Q9HB75 910 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 FBXW11Q9UKB1 542 aa17.28■□□□□ 0.36
LMNA-217ENST00000498722 WDR27A2RRH5 827 aa17.27■□□□□ 0.36
LMNA-217ENST00000498722 GTPBP10A4D1E9 387 aaKnown RBP17.27■□□□□ 0.36
LMNA-217ENST00000498722 OR6C75A6NL08 312 aa17.27■□□□□ 0.36
LMNA-217ENST00000498722 C8AP07357 584 aa17.27■□□□□ 0.36
LMNA-217ENST00000498722 DCAF17Q5H9S7 520 aaPredicted RBP17.27■□□□□ 0.36
LMNA-217ENST00000498722 ATAT1Q5SQI0 421 aa17.27■□□□□ 0.36
LMNA-217ENST00000498722 TCERG1LQ5VWI1 586 aa17.27■□□□□ 0.36
LMNA-217ENST00000498722 TDRD10Q5VZ19 366 aaKnown RBP17.27■□□□□ 0.36
LMNA-217ENST00000498722 CYP26C1Q6V0L0 522 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms