RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 MICAL2O94851 1124 aa17.32■□□□□ 0.36
NR1H3-227ENST00000498548 CST3P01034 146 aaPredicted RBP17.32■□□□□ 0.36
NR1H3-227ENST00000498548 DCNP07585 359 aaKnown RBP17.32■□□□□ 0.36
NR1H3-227ENST00000498548 HAPLN1P10915 354 aaPredicted RBP17.32■□□□□ 0.36
NR1H3-227ENST00000498548 ATF6P18850 670 aa17.32■□□□□ 0.36
NR1H3-227ENST00000498548 TNNI1P19237 187 aa17.32■□□□□ 0.36
NR1H3-227ENST00000498548 GPR15P49685 360 aa17.32■□□□□ 0.36
NR1H3-227ENST00000498548 CYP24A1Q07973 514 aa17.32■□□□□ 0.36
NR1H3-227ENST00000498548 CCDC142Q17RM4 750 aa17.32■□□□□ 0.36
NR1H3-227ENST00000498548 BMT2Q1RMZ1 405 aa17.32■□□□□ 0.36
NR1H3-227ENST00000498548 HS2ST1Q7LGA3 356 aa17.32■□□□□ 0.36
NR1H3-227ENST00000498548 DCP1BQ8IZD4 617 aaKnown RBP17.32■□□□□ 0.36
NR1H3-227ENST00000498548 FSIP1Q8NA03 581 aa17.32■□□□□ 0.36
NR1H3-227ENST00000498548 STKLD1Q8NE28 680 aa17.32■□□□□ 0.36
NR1H3-227ENST00000498548 ZSCAN18Q8TBC5 510 aaPredicted RBP17.32■□□□□ 0.36
NR1H3-227ENST00000498548 ZNF516Q92618 1163 aa17.32■□□□□ 0.36
NR1H3-227ENST00000498548 PSMG2Q969U7 264 aa17.32■□□□□ 0.36
NR1H3-227ENST00000498548 ELSPBP1Q96BH3 223 aa17.32■□□□□ 0.36
NR1H3-227ENST00000498548 HPDLQ96IR7 371 aa17.32■□□□□ 0.36
NR1H3-227ENST00000498548 ASB16Q96NS5 453 aa17.32■□□□□ 0.36
NR1H3-227ENST00000498548 PI4K2AQ9BTU6 479 aa17.32■□□□□ 0.36
NR1H3-227ENST00000498548 FOXQ1Q9C009 403 aa17.32■□□□□ 0.36
NR1H3-227ENST00000498548 GOLPH3LQ9H4A5 285 aa17.32■□□□□ 0.36
NR1H3-227ENST00000498548 SLITRK6Q9H5Y7 841 aa17.32■□□□□ 0.36
NR1H3-227ENST00000498548 R3HCC1Q9Y3T6 440 aaKnown RBP17.32■□□□□ 0.36
NR1H3-227ENST00000498548 NCANO14594 1321 aa17.31■□□□□ 0.36
NR1H3-227ENST00000498548 CD72P21854 359 aa17.31■□□□□ 0.36
NR1H3-227ENST00000498548 GABRR2P28476 465 aa17.31■□□□□ 0.36
NR1H3-227ENST00000498548 TUFMP49411 452 aaKnown RBP17.31■□□□□ 0.36
NR1H3-227ENST00000498548 CASP4P49662 377 aa17.31■□□□□ 0.36
NR1H3-227ENST00000498548 MRE11P49959 708 aa17.31■□□□□ 0.36
NR1H3-227ENST00000498548 PSMD6Q15008 389 aa17.31■□□□□ 0.36
NR1H3-227ENST00000498548 SOWAHAQ2M3V2 549 aa17.31■□□□□ 0.36
NR1H3-227ENST00000498548 SDHAF4Q5VUM1 108 aa17.31■□□□□ 0.36
NR1H3-227ENST00000498548 VITQ6UXI7 678 aa17.31■□□□□ 0.36
NR1H3-227ENST00000498548 GAREM2Q75VX8 874 aa17.31■□□□□ 0.36
NR1H3-227ENST00000498548 TRAPPC11Q7Z392 1133 aa17.31■□□□□ 0.36
NR1H3-227ENST00000498548 WDR49Q8IV35 697 aa17.31■□□□□ 0.36
NR1H3-227ENST00000498548 DTWD2Q8NBA8 298 aa17.31■□□□□ 0.36
NR1H3-227ENST00000498548 LEMD2Q8NC56 503 aa17.31■□□□□ 0.36
NR1H3-227ENST00000498548 FNBP1Q96RU3 617 aa17.31■□□□□ 0.36
NR1H3-227ENST00000498548 ATXN3LQ9H3M9 355 aa17.31■□□□□ 0.36
NR1H3-227ENST00000498548 GDAP2Q9NXN4 497 aa17.31■□□□□ 0.36
NR1H3-227ENST00000498548 USP25Q9UHP3 1055 aa17.31■□□□□ 0.36
NR1H3-227ENST00000498548 GTF3C4Q9UKN8 822 aa17.31■□□□□ 0.36
NR1H3-227ENST00000498548 PCDHB5Q9Y5E4 795 aa17.31■□□□□ 0.36
NR1H3-227ENST00000498548 EXOC3O60645 756 aa17.3■□□□□ 0.36
NR1H3-227ENST00000498548 ATP2C2O75185 946 aa17.3■□□□□ 0.36
NR1H3-227ENST00000498548 PRPF40AO75400 957 aaKnown RBP17.3■□□□□ 0.36
NR1H3-227ENST00000498548 RPN1P04843 607 aaKnown RBP17.3■□□□□ 0.36
NR1H3-227ENST00000498548 SNRPFP62306 86 aaKnown RBP17.3■□□□□ 0.36
NR1H3-227ENST00000498548 CYP4F8P98187 520 aa17.3■□□□□ 0.36
NR1H3-227ENST00000498548 MYL7Q01449 175 aa17.3■□□□□ 0.36
NR1H3-227ENST00000498548 TSPY1Q01534 308 aa17.3■□□□□ 0.36
NR1H3-227ENST00000498548 MLF2Q15773 248 aaPredicted RBP17.3■□□□□ 0.36
NR1H3-227ENST00000498548 ADGRF2Q8IZF7 708 aa17.3■□□□□ 0.36
NR1H3-227ENST00000498548 TOP6BLQ8N6T0 577 aa17.3■□□□□ 0.36
NR1H3-227ENST00000498548 SPPL2BQ8TCT7 592 aa17.3■□□□□ 0.36
NR1H3-227ENST00000498548 PLEKHO2Q8TD55 490 aa17.3■□□□□ 0.36
NR1H3-227ENST00000498548 SMARCD2Q92925 531 aa17.3■□□□□ 0.36
NR1H3-227ENST00000498548 RSPRY1Q96DX4 576 aa17.3■□□□□ 0.36
NR1H3-227ENST00000498548 CGRRF1Q99675 332 aa17.3■□□□□ 0.36
NR1H3-227ENST00000498548 ACBD6Q9BR61 282 aa17.3■□□□□ 0.36
NR1H3-227ENST00000498548 GZF1Q9H116 711 aaPredicted RBP17.3■□□□□ 0.36
NR1H3-227ENST00000498548 HSFX1Q9UBD0 423 aa17.3■□□□□ 0.36
NR1H3-227ENST00000498548 SIT1Q9Y3P8 196 aa17.3■□□□□ 0.36
NR1H3-227ENST00000498548 MTF2Q9Y483 593 aaPredicted RBP17.3■□□□□ 0.36
NR1H3-227ENST00000498548 ASB3Q9Y575 518 aa17.3■□□□□ 0.36
NR1H3-227ENST00000498548 ATP6V1DQ9Y5K8 247 aa17.3■□□□□ 0.36
NR1H3-227ENST00000498548 FAM237AA0A1B0GTK4 181 aa17.29■□□□□ 0.36
NR1H3-227ENST00000498548 PDGFRBP09619 1106 aa17.29■□□□□ 0.36
NR1H3-227ENST00000498548 CYP2F1P24903 491 aa17.29■□□□□ 0.36
NR1H3-227ENST00000498548 LMO2P25791 158 aa17.29■□□□□ 0.36
NR1H3-227ENST00000498548 NUBP1P53384 320 aa17.29■□□□□ 0.36
NR1H3-227ENST00000498548 STARD6P59095 220 aa17.29■□□□□ 0.36
NR1H3-227ENST00000498548 MYO1EQ12965 1108 aa17.29■□□□□ 0.36
NR1H3-227ENST00000498548 PSMD2Q13200 908 aa17.29■□□□□ 0.36
NR1H3-227ENST00000498548 BECN1Q14457 450 aa17.29■□□□□ 0.36
NR1H3-227ENST00000498548 DDR2Q16832 855 aa17.29■□□□□ 0.36
NR1H3-227ENST00000498548 INTS6LQ5JSJ4 861 aaKnown RBP17.29■□□□□ 0.36
NR1H3-227ENST00000498548 GPR158Q5T848 1215 aa17.29■□□□□ 0.36
NR1H3-227ENST00000498548 PHLDB3Q6NSJ2 640 aa17.29■□□□□ 0.36
NR1H3-227ENST00000498548 ITIH5Q86UX2 942 aa17.29■□□□□ 0.36
NR1H3-227ENST00000498548 C12orf56Q8IXR9 622 aa17.29■□□□□ 0.36
NR1H3-227ENST00000498548 CCDC105Q8IYK2 499 aa17.29■□□□□ 0.36
NR1H3-227ENST00000498548 TMEM86AQ8N2M4 240 aa17.29■□□□□ 0.36
NR1H3-227ENST00000498548 C2orf15Q8WU43 125 aaKnown RBP17.29■□□□□ 0.36
NR1H3-227ENST00000498548 ELMO3Q96BJ8 720 aa17.29■□□□□ 0.36
NR1H3-227ENST00000498548 MMS19Q96T76 1030 aa17.29■□□□□ 0.36
NR1H3-227ENST00000498548 SCAND2PQ9GZW5 306 aaPredicted RBP17.29■□□□□ 0.36
NR1H3-227ENST00000498548 HEBP1Q9NRV9 189 aa17.29■□□□□ 0.36
NR1H3-227ENST00000498548 MIA3Q5JRA6 1907 aa17.28■□□□□ 0.36
NR1H3-227ENST00000498548 TICRRQ7Z2Z1 1910 aa17.28■□□□□ 0.36
NR1H3-227ENST00000498548 MYBPHLA2RUH7 354 aa17.28■□□□□ 0.36
NR1H3-227ENST00000498548 HEPACAM2A8MVW5 462 aa17.28■□□□□ 0.36
NR1H3-227ENST00000498548 GABRDO14764 452 aa17.28■□□□□ 0.36
NR1H3-227ENST00000498548 GLULP15104 373 aa17.28■□□□□ 0.36
NR1H3-227ENST00000498548 GDI1P31150 447 aa17.28■□□□□ 0.36
NR1H3-227ENST00000498548 PSMC1P62191 440 aaKnown RBP17.28■□□□□ 0.36
NR1H3-227ENST00000498548 PFKPQ01813 784 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms