RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 MYO1AQ9UBC5 1043 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 HERC5Q9UII4 1024 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 ELF5Q9UKW6 265 aaPredicted RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 PCDHB10Q9UN67 800 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ZNF521Q96K83 1311 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 IGKV6-21A0A0C4DH24 114 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 HMX3A6NHT5 357 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 RRN3P2A6NIE6 340 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 CCT8L1PA6NM43 557 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 H3BRB1 525 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 KCNK1O00180 336 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ADAM10O14672 748 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 KIF1CO43896 1103 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 SYNCRIPO60506 623 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 SHOX2O60902 331 aaPredicted RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 ADAM23O75077 832 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ALDH1L1O75891 902 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ALBP02768 609 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ZCCHC18P0CG32 403 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 T-ENOLP0DO92 83 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 UROSP10746 265 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 PLCG1P19174 1290 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TRIM21P19474 475 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 CD22P20273 847 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 OAS2P29728 719 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 ADD2P35612 726 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ADPRHP54922 357 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 RHOBP62745 196 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ROR1Q01973 937 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 PDCLQ13371 301 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 CNGB1Q14028 1251 aaPredicted RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 MLC1Q15049 377 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 MTFR1Q15390 333 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TMEM240Q5SV17 173 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 C12orf54Q6X4T0 127 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TSHZ1Q6ZSZ6 1077 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TLK2Q86UE8 772 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 C1orf52Q8N6N3 182 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 IL22RA1Q8N6P7 574 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 CMASQ8NFW8 434 aaPredicted RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 WDR66Q8TBY9 1149 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 FBF1Q8TES7 1133 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ACOT12Q8WYK0 555 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 BSNDQ8WZ55 320 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 RAPGEF5Q92565 580 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 NELL1Q92832 810 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TNFRSF25Q93038 417 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 UBE2E2Q96LR5 201 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 BBS4Q96RK4 519 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 SLC26A8Q96RN1 970 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 SPOCK3Q9BQ16 436 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 PPP1R12CQ9BZL4 782 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 FAM117AQ9C073 453 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 DPH3P1Q9H4G8 78 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TUT1Q9H6E5 874 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 POLR1BQ9H9Y6 1135 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 PLEKHA5Q9HAU0 1116 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 CA10Q9NS85 328 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 KRT82Q9NSB4 513 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 MRGBPQ9NV56 204 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TYW1Q9NV66 732 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 LYARQ9NX58 379 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 SPG21Q9NZD8 308 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 AGAP1Q9UPQ3 857 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 NOC2LQ9Y3T9 749 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 RWDD3Q9Y3V2 267 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 COLEC10Q9Y6Z7 277 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 LTN1O94822 1766 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 KDM3BQ7LBC6 1761 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 CTTNBP2Q8WZ74 1663 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 LTBP3Q9NS15 1303 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 PIPSLA2A3N6 862 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TCERG1O14776 1098 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 DCXO43602 365 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 LMX1BO60663 402 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 HSF2BPO75031 334 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 CLSTN1O94985 981 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 NR3C1P04150 777 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 PRKCGP05129 697 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 FSTP19883 344 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 CDC25CP30307 473 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 CHRNA4P43681 627 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 SCTRP47872 440 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 CYP2J2P51589 502 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 KCNQ4P56696 695 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ACTA2P62736 377 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 ACTC1P68032 377 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 NIPAL4Q0D2K0 466 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 FUT7Q11130 342 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 PTPN21Q16825 1174 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 IQCJQ1A5X6 159 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 CCDC38Q502W7 563 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TEX35Q5T0J7 233 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 LYRM7Q5U5X0 104 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 OLFML2BQ68BL8 750 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 TRMT10BQ6PF06 316 aaKnown RBP1.55□□□□□ -2.16
XRN1-214ENST00000498077 KLHL17Q6TDP4 642 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 MTHFD1LQ6UB35 978 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 Q7L0L9 218 aa1.55□□□□□ -2.16
XRN1-214ENST00000498077 FAM129CQ86XR2 697 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms