RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 SGSM2O43147 1006 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 IRAK2O43187 625 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 ORC4O43929 436 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 PHF2O75151 1096 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 ENDOD1O94919 500 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 FTLP02792 175 aaPredicted RBP2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 FUCA1P04066 466 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 ZGLP1P0C6A0 271 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 ALADP13716 330 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 HNRNPLP14866 589 aaKnown RBP eCLIP2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 PNLIPP16233 465 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 FGFR2P21802 821 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 SLC6A9P48067 706 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 MAN2A2P49641 1150 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 APBA1Q02410 837 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 CHRNEQ04844 493 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 EGR3Q06889 387 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 NFATC3Q12968 1075 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 PDE1CQ14123 709 aaPredicted RBP2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 NFKBIBQ15653 356 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 GRIK4Q16099 956 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 PFKFB4Q16877 469 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 TRIM71Q2Q1W2 868 aaKnown RBP2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 MST1LQ2TV78 715 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 WDR45BQ5MNZ6 344 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 UBXN11Q5T124 520 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 VPS53Q5VIR6 699 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 TSHZ3Q63HK5 1081 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 RNF43Q68DV7 783 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 GALNT18Q6P9A2 607 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 USP17L6PQ6QN14 398 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 ZPBP2Q6X784 338 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 DSTYKQ6XUX3 929 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 SPOCD1Q6ZMY3 1216 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 GAREM2Q75VX8 874 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 CXXC5Q7LFL8 322 aaKnown RBP2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 ANKRD23Q86SG2 305 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 LRRTM4Q86VH4 590 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 SKAP1Q86WV1 359 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 GLB1L2Q8IW92 636 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 TMEFF1Q8IYR6 380 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 RTKN2Q8IZC4 609 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 VGLL2Q8N8G2 317 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 PCYOX1LQ8NBM8 494 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 GPR156Q8NFN8 814 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 FAM71BQ8TC56 605 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 IFI44Q8TCB0 444 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 CALML6Q8TD86 181 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 GAB3Q8WWW8 586 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 CENPIQ92674 756 aaPredicted RBP2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 UBE2FQ969M7 185 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 TSPAN17Q96FV3 270 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 SLC35A4Q96G79 324 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 TOE1Q96GM8 510 aaKnown RBP2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 MFSD14AQ96MC6 490 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 TBC1D32Q96NH3 1257 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 TUBGCP5Q96RT8 1024 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 PRRX2Q99811 253 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 SOX7Q9BT81 388 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 BTBD2Q9BX70 525 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 MTG2Q9H4K7 406 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 C7orf69Q9H7B7 122 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 JMJD4Q9H9V9 463 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 SMURF2Q9HAU4 748 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 SMYD2Q9NRG4 433 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 PNPOQ9NVS9 261 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 RRN3Q9NYV6 651 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 SIK3Q9Y2K2 1263 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 CRYL1Q9Y2S2 319 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 RABGAP1Q9Y3P9 1069 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 PCDHB4Q9Y5E5 795 aa2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 AFDNP55196 1824 aaKnown RBP2.86□□□□□ -1.95
CKS1BP2-201ENST00000497342 DAPK1P53355 1430 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 VPS8Q8N3P4 1428 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 IGF2RP11717 2491 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 BRWD1Q9NSI6 2320 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 LOC400499M0QZD8 3231 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 PRR23AA6NEV1 266 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 ZNF839A8K0R7 811 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 FAM229AH3BQW9 127 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 CCER2I3L3R5 266 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 ARHGAP6O43182 974 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 CD4P01730 458 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 F13BP05160 661 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 ANXA2P07355 339 aaKnown RBP2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 PARP1P09874 1014 aaKnown RBP2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 VDRP11473 427 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 PTGS1P23219 599 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 COL8A1P27658 744 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 CST5P28325 142 aaPredicted RBP2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 SMARCA1P28370 1054 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 GUCY1A2P33402 732 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 MAPK9P45984 424 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 GMPSP49915 693 aaPredicted RBP2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 CDK7P50613 346 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 POLE2P56282 527 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 INHBEP58166 350 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 SLC6A3Q01959 620 aa2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 TARDBPQ13148 414 aaKnown RBP eCLIP2.85□□□□□ -1.95
CKS1BP2-201ENST00000497342 CRHR2Q13324 411 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms