RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 TMEM47Q9BQJ4 181 aa6.15□□□□□ -1.42
GGPS1-208ENST00000497327 AGO3Q9H9G7 860 aaKnown RBP6.15□□□□□ -1.42
GGPS1-208ENST00000497327 MTMR4Q9NYA4 1195 aa6.15□□□□□ -1.42
GGPS1-208ENST00000497327 PLA2G3Q9NZ20 509 aa6.15□□□□□ -1.42
GGPS1-208ENST00000497327 GPRC5DQ9NZD1 345 aa6.15□□□□□ -1.42
GGPS1-208ENST00000497327 TMOD2Q9NZR1 351 aa6.15□□□□□ -1.42
GGPS1-208ENST00000497327 ORC3Q9UBD5 711 aaPredicted RBP6.15□□□□□ -1.42
GGPS1-208ENST00000497327 NAP1L2Q9ULW6 460 aaPredicted RBP6.15□□□□□ -1.42
GGPS1-208ENST00000497327 ASB1Q9Y576 335 aa6.15□□□□□ -1.42
GGPS1-208ENST00000497327 STK36Q9NRP7 1315 aa6.15□□□□□ -1.43
GGPS1-208ENST00000497327 FOCADQ5VW36 1801 aa6.15□□□□□ -1.43
GGPS1-208ENST00000497327 NAV1Q8NEY1 1877 aa6.15□□□□□ -1.43
GGPS1-208ENST00000497327 CDK5RAP2Q96SN8 1893 aa6.15□□□□□ -1.43
GGPS1-208ENST00000497327 LAMB1P07942 1786 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 CCDC196A0A1B0GTZ2 297 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 UBE2Q2LH0YL09 131 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 CPLX1O14810 134 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 PRPF3O43395 683 aaKnown RBP6.14□□□□□ -1.43
GGPS1-208ENST00000497327 EFCAB14O75071 495 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 MAFO75444 373 aaPredicted RBP6.14□□□□□ -1.43
GGPS1-208ENST00000497327 CDKL5O76039 1030 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 SNHG28P0DPA3 235 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 TOP1P11387 765 aaKnown RBP6.14□□□□□ -1.43
GGPS1-208ENST00000497327 ATP2B1P20020 1258 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 STAT5BP51692 787 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 ABHD18Q0P651 414 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 RESTQ13127 1097 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 SHROOM1Q2M3G4 852 aaPredicted RBP6.14□□□□□ -1.43
GGPS1-208ENST00000497327 LSM12Q3MHD2 195 aaKnown RBP6.14□□□□□ -1.43
GGPS1-208ENST00000497327 ZC3H12BQ5HYM0 836 aaKnown RBP6.14□□□□□ -1.43
GGPS1-208ENST00000497327 CATSPEREQ5SY80 951 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 GRAMD4Q6IC98 578 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 ABHD17CQ6PCB6 329 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 SRBD1Q8N5C6 995 aaKnown RBP6.14□□□□□ -1.43
GGPS1-208ENST00000497327 JMYQ8N9B5 988 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 FBXO18Q8NFZ0 1043 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 NUP133Q8WUM0 1156 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 MKL1Q969V6 931 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 AIFM3Q96NN9 605 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 DEPDC7Q96QD5 511 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 TANGO6Q9C0B7 1094 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 TMEM39BQ9GZU3 492 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 CSRNP2Q9H175 543 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 TLR9Q9NR96 1032 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 RBM28Q9NW13 759 aaKnown RBP6.14□□□□□ -1.43
GGPS1-208ENST00000497327 HECAQ9UBI9 543 aaPredicted RBP6.14□□□□□ -1.43
GGPS1-208ENST00000497327 MAD2L2Q9UI95 211 aa6.14□□□□□ -1.43
GGPS1-208ENST00000497327 HERC5Q9UII4 1024 aaKnown RBP6.14□□□□□ -1.43
GGPS1-208ENST00000497327 ASTN2O75129 1339 aaPredicted RBP6.14□□□□□ -1.43
GGPS1-208ENST00000497327 SIPA1L1O43166 1804 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 PMS2P1A4D2B8 440 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 GOLGA6L22H0YM25 854 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 H7C1D1 291 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 DDNO94850 711 aaPredicted RBP6.13□□□□□ -1.43
GGPS1-208ENST00000497327 PLEKHA8P1O95397 391 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 SMARCA1P28370 1054 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 EPS15P42566 896 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 MEOX1P50221 254 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 CERKLQ49MI3 558 aaPredicted RBP6.13□□□□□ -1.43
GGPS1-208ENST00000497327 FNDC7Q5VTL7 733 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 OTUD7BQ6GQQ9 843 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 CPLX2Q6PUV4 134 aaKnown RBP6.13□□□□□ -1.43
GGPS1-208ENST00000497327 TMEM179Q6ZVK1 233 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 AMER2Q8N7J2 671 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 FAM184AQ8NB25 1140 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 SREK1Q8WXA9 508 aaKnown RBP6.13□□□□□ -1.43
GGPS1-208ENST00000497327 PHKBQ93100 1093 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 FOXRED1Q96CU9 486 aaPredicted RBP6.13□□□□□ -1.43
GGPS1-208ENST00000497327 SLC26A6Q9BXS9 759 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 RNF26Q9BY78 433 aaPredicted RBP6.13□□□□□ -1.43
GGPS1-208ENST00000497327 NELFAQ9H3P2 528 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 KAT14Q9H8E8 782 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 KANSL2Q9H9L4 492 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 GJB4Q9NTQ9 266 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 LMBRD1Q9NUN5 540 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 SNTG2Q9NY99 539 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 RNF181Q9P0P0 153 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 NYAP2Q9P242 653 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 HACL1Q9UJ83 578 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 KIF3AQ9Y496 699 aa6.13□□□□□ -1.43
GGPS1-208ENST00000497327 VPS37CA5D8V6 355 aaPredicted RBP6.12□□□□□ -1.43
GGPS1-208ENST00000497327 SLC26A4O43511 780 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 CYTH3O43739 400 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 DEXIO95424 95 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 TTLL1O95922 423 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 ZBTB48P10074 688 aaPredicted RBP6.12□□□□□ -1.43
GGPS1-208ENST00000497327 PDHBP11177 359 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 MYH1P12882 1939 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 VEGFAP15692 232 aaPredicted RBP6.12□□□□□ -1.43
GGPS1-208ENST00000497327 KIF5BP33176 963 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 GNAQP50148 359 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 TNFAIP1Q13829 316 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 GRM7Q14831 915 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 SEPT2Q15019 361 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 NPY5RQ15761 445 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 ABCB5Q2M3G0 1257 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 KRT40Q6A162 431 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 RASGRP2Q7LDG7 609 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 FGD2Q7Z6J4 655 aa6.12□□□□□ -1.43
GGPS1-208ENST00000497327 RTN4RL1Q86UN2 441 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms