RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 PDLIM2Q96JY6 352 aa4.81□□□□□ -1.64
CD46-218ENST00000496723 TINAGL1Q9GZM7 467 aaPredicted RBP4.81□□□□□ -1.64
CD46-218ENST00000496723 SARS2Q9NP81 518 aaKnown RBP4.81□□□□□ -1.64
CD46-218ENST00000496723 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.81□□□□□ -1.64
CD46-218ENST00000496723 INTS13Q9NVM9 706 aa4.81□□□□□ -1.64
CD46-218ENST00000496723 MRPS18AQ9NVS2 196 aaKnown RBP4.81□□□□□ -1.64
CD46-218ENST00000496723 LRIT1Q9P2V4 623 aa4.81□□□□□ -1.64
CD46-218ENST00000496723 GABBR1Q9UBS5 961 aa4.81□□□□□ -1.64
CD46-218ENST00000496723 PCDHA6Q9UN73 950 aa4.81□□□□□ -1.64
CD46-218ENST00000496723 AGAP1Q9UPQ3 857 aa4.81□□□□□ -1.64
CD46-218ENST00000496723 CTNND1O60716 968 aaKnown RBP4.8□□□□□ -1.64
CD46-218ENST00000496723 VPS4BO75351 444 aa4.8□□□□□ -1.64
CD46-218ENST00000496723 C1QL1O75973 258 aa4.8□□□□□ -1.64
CD46-218ENST00000496723 KIF20AO95235 890 aa4.8□□□□□ -1.64
CD46-218ENST00000496723 U2AF1L5P0DN76 240 aaPredicted RBP4.8□□□□□ -1.64
CD46-218ENST00000496723 HDCP19113 662 aa4.8□□□□□ -1.64
CD46-218ENST00000496723 GATA3P23771 443 aa4.8□□□□□ -1.64
CD46-218ENST00000496723 HTR1BP28222 390 aa4.8□□□□□ -1.64
CD46-218ENST00000496723 ANXA11P50995 505 aaKnown RBP4.8□□□□□ -1.64
CD46-218ENST00000496723 RAB1AP62820 205 aa4.8□□□□□ -1.64
CD46-218ENST00000496723 MRPS35P82673 323 aaKnown RBP4.8□□□□□ -1.64
CD46-218ENST00000496723 U2AF1Q01081 240 aaKnown RBP eCLIP4.8□□□□□ -1.646e-10■■■■□ 21.6
CD46-218ENST00000496723 SF3B3Q15393 1217 aaKnown RBP4.8□□□□□ -1.64
CD46-218ENST00000496723 KHDC1LQ5JSQ8 128 aa4.8□□□□□ -1.64
CD46-218ENST00000496723 USP37Q86T82 979 aa4.8□□□□□ -1.64
CD46-218ENST00000496723 ADGRG5Q8IZF4 528 aa4.8□□□□□ -1.64
CD46-218ENST00000496723 CELF5Q8N6W0 485 aaKnown RBP4.8□□□□□ -1.64
CD46-218ENST00000496723 PCSK9Q8NBP7 692 aaKnown RBP4.8□□□□□ -1.64
CD46-218ENST00000496723 ZBTB34Q8NCN2 500 aa4.8□□□□□ -1.64
CD46-218ENST00000496723 SSH3Q8TE77 659 aa4.8□□□□□ -1.64
CD46-218ENST00000496723 FBXO41Q8TF61 875 aa4.8□□□□□ -1.64
CD46-218ENST00000496723 SMG7Q92540 1137 aaKnown RBP4.8□□□□□ -1.64
CD46-218ENST00000496723 SNX19Q92543 992 aa4.8□□□□□ -1.64
CD46-218ENST00000496723 CNPPD1Q9BV87 410 aa4.8□□□□□ -1.64
CD46-218ENST00000496723 SIK2Q9H0K1 926 aa4.8□□□□□ -1.64
CD46-218ENST00000496723 FOXJ2Q9P0K8 574 aa4.8□□□□□ -1.64
CD46-218ENST00000496723 SLC17A6Q9P2U8 582 aa4.8□□□□□ -1.64
CD46-218ENST00000496723 STAP2Q9UGK3 403 aa4.8□□□□□ -1.64
CD46-218ENST00000496723 CPA4Q9UI42 421 aa4.8□□□□□ -1.64
CD46-218ENST00000496723 DMTF1Q9Y222 760 aa4.8□□□□□ -1.64
CD46-218ENST00000496723 A0A088AWK7 358 aa4.79□□□□□ -1.64
CD46-218ENST00000496723 M0QYG6 137 aa4.79□□□□□ -1.64
CD46-218ENST00000496723 TSPAN6O43657 245 aa4.79□□□□□ -1.64
CD46-218ENST00000496723 KCNJ5P48544 419 aa4.79□□□□□ -1.64
CD46-218ENST00000496723 SOX8P57073 446 aa4.79□□□□□ -1.64
CD46-218ENST00000496723 FGL2Q14314 439 aa4.79□□□□□ -1.64
CD46-218ENST00000496723 MINDY4Q4G0A6 757 aa4.79□□□□□ -1.64
CD46-218ENST00000496723 TMPRSS9Q7Z410 1059 aa4.79□□□□□ -1.64
CD46-218ENST00000496723 DAAM2Q86T65 1068 aa4.79□□□□□ -1.64
CD46-218ENST00000496723 TCEAL8Q8IYN2 117 aa4.79□□□□□ -1.64
CD46-218ENST00000496723 LNX2Q8N448 690 aa4.79□□□□□ -1.64
CD46-218ENST00000496723 PSD4Q8NDX1 1056 aa4.79□□□□□ -1.64
CD46-218ENST00000496723 SLC30A5Q8TAD4 765 aa4.79□□□□□ -1.64
CD46-218ENST00000496723 POC1BQ8TC44 478 aa4.79□□□□□ -1.64
CD46-218ENST00000496723 DDX17Q92841 729 aaKnown RBP4.79□□□□□ -1.64
CD46-218ENST00000496723 AIFM2Q9BRQ8 373 aa4.79□□□□□ -1.64
CD46-218ENST00000496723 KCTD5Q9NXV2 234 aa4.79□□□□□ -1.64
CD46-218ENST00000496723 ETAA1Q9NY74 926 aa4.79□□□□□ -1.64
CD46-218ENST00000496723 COL3A1P02461 1466 aaPredicted RBP4.79□□□□□ -1.64
CD46-218ENST00000496723 E7ENX8 843 aa4.78□□□□□ -1.64
CD46-218ENST00000496723 CHRM3P20309 590 aa4.78□□□□□ -1.64
CD46-218ENST00000496723 NPTX2P47972 431 aa4.78□□□□□ -1.64
CD46-218ENST00000496723 TAP2Q03519 686 aa4.78□□□□□ -1.64
CD46-218ENST00000496723 HLXQ14774 488 aaPredicted RBP4.78□□□□□ -1.64
CD46-218ENST00000496723 MLC1Q15049 377 aa4.78□□□□□ -1.64
CD46-218ENST00000496723 EMC10Q5UCC4 262 aa4.78□□□□□ -1.64
CD46-218ENST00000496723 NXNQ6DKJ4 435 aa4.78□□□□□ -1.64
CD46-218ENST00000496723 TAF2Q6P1X5 1199 aa4.78□□□□□ -1.64
CD46-218ENST00000496723 OVCH2Q7RTZ1 564 aa4.78□□□□□ -1.64
CD46-218ENST00000496723 PPP1R32Q7Z5V6 425 aa4.78□□□□□ -1.64
CD46-218ENST00000496723 ARHGEF25Q86VW2 580 aa4.78□□□□□ -1.64
CD46-218ENST00000496723 MAGEB6Q8N7X4 407 aa4.78□□□□□ -1.64
CD46-218ENST00000496723 SCARB1Q8WTV0 552 aa4.78□□□□□ -1.64
CD46-218ENST00000496723 RUNDC1Q96C34 613 aa4.78□□□□□ -1.64
CD46-218ENST00000496723 HEPHQ9BQS7 1158 aa4.78□□□□□ -1.64
CD46-218ENST00000496723 SMOC2Q9H3U7 446 aa4.78□□□□□ -1.64
CD46-218ENST00000496723 CNNM1Q9NRU3 951 aa4.78□□□□□ -1.64
CD46-218ENST00000496723 KLHL42Q9P2K6 505 aa4.78□□□□□ -1.64
CD46-218ENST00000496723 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.78□□□□□ -1.64
CD46-218ENST00000496723 SETD1BQ9UPS6 1966 aaKnown RBP4.78□□□□□ -1.64
CD46-218ENST00000496723 DNAJC9-AS1A6NH13 148 aa4.77□□□□□ -1.65
CD46-218ENST00000496723 LRRC3CA6NJW4 275 aa4.77□□□□□ -1.65
CD46-218ENST00000496723 F5H697 171 aa4.77□□□□□ -1.65
CD46-218ENST00000496723 YY2O15391 372 aa4.77□□□□□ -1.65
CD46-218ENST00000496723 PEX1O43933 1283 aa4.77□□□□□ -1.65
CD46-218ENST00000496723 TUSC2O75896 110 aa4.77□□□□□ -1.65
CD46-218ENST00000496723 SRGNP10124 158 aa4.77□□□□□ -1.65
CD46-218ENST00000496723 TCF15Q12870 199 aa4.77□□□□□ -1.65
CD46-218ENST00000496723 ANO6Q4KMQ2 910 aa4.77□□□□□ -1.65
CD46-218ENST00000496723 ARHGAP29Q52LW3 1261 aa4.77□□□□□ -1.65
CD46-218ENST00000496723 NPNTQ6UXI9 565 aa4.77□□□□□ -1.65
CD46-218ENST00000496723 TSHZ1Q6ZSZ6 1077 aa4.77□□□□□ -1.65
CD46-218ENST00000496723 FAM9AQ8IZU1 332 aaPredicted RBP4.77□□□□□ -1.65
CD46-218ENST00000496723 MYO1HQ8N1T3 1032 aa4.77□□□□□ -1.65
CD46-218ENST00000496723 FAM46DQ8NEK8 389 aa4.77□□□□□ -1.65
CD46-218ENST00000496723 ACTRT2Q8TDY3 377 aa4.77□□□□□ -1.65
CD46-218ENST00000496723 LPIN2Q92539 896 aa4.77□□□□□ -1.65
CD46-218ENST00000496723 TSR2Q969E8 191 aaKnown RBP4.77□□□□□ -1.65
CD46-218ENST00000496723 NT5C1BQ96P26 610 aa4.77□□□□□ -1.65
CD46-218ENST00000496723 RAD54BQ9Y620 910 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms