RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 MAGEA9P43362 315 aa13.71□□□□□ -0.21
PTPRF-214ENST00000496043 CDR1P51861 262 aa13.71□□□□□ -0.21
PTPRF-214ENST00000496043 MYL7Q01449 175 aa13.71□□□□□ -0.21
PTPRF-214ENST00000496043 DNM1Q05193 864 aaKnown RBP13.71□□□□□ -0.21
PTPRF-214ENST00000496043 MYO1EQ12965 1108 aa13.71□□□□□ -0.21
PTPRF-214ENST00000496043 NFE2Q16621 373 aaPredicted RBP13.71□□□□□ -0.21
PTPRF-214ENST00000496043 VITQ6UXI7 678 aa13.71□□□□□ -0.21
PTPRF-214ENST00000496043 TPRG1Q6ZUI0 275 aa13.71□□□□□ -0.21
PTPRF-214ENST00000496043 GAREM2Q75VX8 874 aa13.71□□□□□ -0.21
PTPRF-214ENST00000496043 YAF2Q8IY57 180 aa13.71□□□□□ -0.21
PTPRF-214ENST00000496043 CEP57L1Q8IYX8 460 aa13.71□□□□□ -0.21
PTPRF-214ENST00000496043 PDCL2Q8N4E4 241 aa13.71□□□□□ -0.21
PTPRF-214ENST00000496043 CXorf38Q8TB03 319 aa13.71□□□□□ -0.21
PTPRF-214ENST00000496043 ACBD6Q9BR61 282 aa13.71□□□□□ -0.21
PTPRF-214ENST00000496043 BLZF1Q9H2G9 400 aa13.71□□□□□ -0.21
PTPRF-214ENST00000496043 ZNF334Q9HCZ1 680 aaPredicted RBP13.71□□□□□ -0.21
PTPRF-214ENST00000496043 LTB4R2Q9NPC1 389 aa13.71□□□□□ -0.21
PTPRF-214ENST00000496043 TRPV5Q9NQA5 729 aa13.71□□□□□ -0.21
PTPRF-214ENST00000496043 HEBP1Q9NRV9 189 aa13.71□□□□□ -0.21
PTPRF-214ENST00000496043 GDAP2Q9NXN4 497 aa13.71□□□□□ -0.21
PTPRF-214ENST00000496043 HSPBP1Q9NZL4 362 aa13.71□□□□□ -0.21
PTPRF-214ENST00000496043 MTF2Q9Y483 593 aaPredicted RBP13.71□□□□□ -0.21
PTPRF-214ENST00000496043 SNX9Q9Y5X1 595 aa13.71□□□□□ -0.21
PTPRF-214ENST00000496043 WDFY4Q6ZS81 3184 aa13.71□□□□□ -0.22
PTPRF-214ENST00000496043 DPYSL4O14531 572 aa13.7□□□□□ -0.22
PTPRF-214ENST00000496043 CDC25CP30307 473 aa13.7□□□□□ -0.22
PTPRF-214ENST00000496043 AFMP43652 599 aa13.7□□□□□ -0.22
PTPRF-214ENST00000496043 LHX1P48742 406 aa13.7□□□□□ -0.22
PTPRF-214ENST00000496043 PKP1Q13835 747 aa13.7□□□□□ -0.22
PTPRF-214ENST00000496043 GPR158Q5T848 1215 aa13.7□□□□□ -0.22
PTPRF-214ENST00000496043 LMBRD2Q68DH5 695 aaPredicted RBP13.7□□□□□ -0.22
PTPRF-214ENST00000496043 DPH6Q7L8W6 267 aa13.7□□□□□ -0.22
PTPRF-214ENST00000496043 ASCL5Q7RTU5 278 aa13.7□□□□□ -0.22
PTPRF-214ENST00000496043 CBWD2Q8IUF1 395 aa13.7□□□□□ -0.22
PTPRF-214ENST00000496043 ARID3BQ8IVW6 561 aaPredicted RBP13.7□□□□□ -0.22
PTPRF-214ENST00000496043 TOP6BLQ8N6T0 577 aa13.7□□□□□ -0.22
PTPRF-214ENST00000496043 RDH13Q8NBN7 331 aa13.7□□□□□ -0.22
PTPRF-214ENST00000496043 SPATA18Q8TC71 538 aa13.7□□□□□ -0.22
PTPRF-214ENST00000496043 GIPC2Q8TF65 315 aa13.7□□□□□ -0.22
PTPRF-214ENST00000496043 LPIN3Q9BQK8 851 aa13.7□□□□□ -0.22
PTPRF-214ENST00000496043 MTMR12Q9C0I1 747 aa13.7□□□□□ -0.22
PTPRF-214ENST00000496043 SEMA4AQ9H3S1 761 aa13.7□□□□□ -0.22
PTPRF-214ENST00000496043 AGPAT3Q9NRZ7 376 aa13.7□□□□□ -0.22
PTPRF-214ENST00000496043 DDX43Q9NXZ2 648 aaKnown RBP13.7□□□□□ -0.22
PTPRF-214ENST00000496043 ABI2Q9NYB9 513 aaPredicted RBP13.7□□□□□ -0.22
PTPRF-214ENST00000496043 CGNQ9P2M7 1197 aaKnown RBP13.7□□□□□ -0.22
PTPRF-214ENST00000496043 SIX4Q9UIU6 781 aa13.7□□□□□ -0.22
PTPRF-214ENST00000496043 L1RE1Q9UN81 338 aa13.7□□□□□ -0.22
PTPRF-214ENST00000496043 GTF3C3Q9Y5Q9 886 aa13.7□□□□□ -0.22
PTPRF-214ENST00000496043 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.69□□□□□ -0.22
PTPRF-214ENST00000496043 CLIC2O15247 247 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 TGFB1I1O43294 461 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 PRPF40AO75400 957 aaKnown RBP13.69□□□□□ -0.22
PTPRF-214ENST00000496043 SLFN14P0C7P3 912 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 SP9P0CG40 484 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 CASP1P29466 404 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 WEE1P30291 646 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 EHHADHQ08426 723 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 CUL4BQ13620 913 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 SCARA3Q6AZY7 606 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 HS2ST1Q7LGA3 356 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 GPIHBP1Q8IV16 184 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 WDR49Q8IV35 697 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 NELFCDQ8IXH7 590 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 XXYLT1Q8NBI6 393 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 OR5B17Q8NGF7 314 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 CSGALNACT1Q8TDX6 532 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 SCFD1Q8WVM8 642 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 CLDN23Q96B33 292 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 HPDLQ96IR7 371 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 GCNAQ96QF7 691 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 FNBP1Q96RU3 617 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 PI4K2AQ9BTU6 479 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 TASP1Q9H6P5 420 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 SLC39A2Q9NP94 309 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 TMLHEQ9NVH6 421 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 SPATA6Q9NWH7 488 aaPredicted RBP13.69□□□□□ -0.22
PTPRF-214ENST00000496043 SERTAD1Q9UHV2 236 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 SCN1AP35498 2009 aa13.69□□□□□ -0.22
PTPRF-214ENST00000496043 UBE4BO95155 1302 aa13.68□□□□□ -0.22
PTPRF-214ENST00000496043 PRR23AA6NEV1 266 aa13.68□□□□□ -0.22
PTPRF-214ENST00000496043 GABRDO14764 452 aa13.68□□□□□ -0.22
PTPRF-214ENST00000496043 CHADO15335 359 aa13.68□□□□□ -0.22
PTPRF-214ENST00000496043 LAMTOR5O43504 91 aa13.68□□□□□ -0.22
PTPRF-214ENST00000496043 ATF6P18850 670 aa13.68□□□□□ -0.22
PTPRF-214ENST00000496043 TNNI1P19237 187 aa13.68□□□□□ -0.22
PTPRF-214ENST00000496043 CMA1P23946 247 aa13.68□□□□□ -0.22
PTPRF-214ENST00000496043 TARSP26639 723 aaKnown RBP13.68□□□□□ -0.22
PTPRF-214ENST00000496043 PCSK1P29120 753 aa13.68□□□□□ -0.22
PTPRF-214ENST00000496043 RPS9P46781 194 aaKnown RBP13.68□□□□□ -0.22
PTPRF-214ENST00000496043 CYP2J2P51589 502 aa13.68□□□□□ -0.22
PTPRF-214ENST00000496043 MLLT6P55198 1093 aaPredicted RBP13.68□□□□□ -0.22
PTPRF-214ENST00000496043 RPL10AP62906 217 aaKnown RBP13.68□□□□□ -0.22
PTPRF-214ENST00000496043 SNRNP35Q16560 246 aaKnown RBP13.68□□□□□ -0.22
PTPRF-214ENST00000496043 KNOP1Q1ED39 458 aaKnown RBP13.68□□□□□ -0.22
PTPRF-214ENST00000496043 SOWAHAQ2M3V2 549 aa13.68□□□□□ -0.22
PTPRF-214ENST00000496043 STXBP5Q5T5C0 1151 aa13.68□□□□□ -0.22
PTPRF-214ENST00000496043 TRAPPC11Q7Z392 1133 aa13.68□□□□□ -0.22
PTPRF-214ENST00000496043 LEO1Q8WVC0 666 aaPredicted RBP13.68□□□□□ -0.22
PTPRF-214ENST00000496043 FAM3CQ92520 227 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms