RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 PGLYRP2Q96PD5 576 aa12.93□□□□□ -0.34
CSNK1E-213ENST00000495232 MED15Q96RN5 788 aa12.93□□□□□ -0.34
CSNK1E-213ENST00000495232 ZCWPW1Q9H0M4 648 aa12.93□□□□□ -0.34
CSNK1E-213ENST00000495232 ADAM7Q9H2U9 754 aa12.93□□□□□ -0.34
CSNK1E-213ENST00000495232 CDH9Q9ULB4 789 aa12.93□□□□□ -0.34
CSNK1E-213ENST00000495232 POLIQ9UNA4 740 aa12.93□□□□□ -0.34
CSNK1E-213ENST00000495232 SYCE3A1L190 88 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 A8MXQ7 604 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 PES1O00541 588 aaKnown RBP12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 GABRDO14764 452 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 MBTPS2O43462 519 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 XYLBO75191 536 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 RFPL2O75678 378 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 ZMYND10O75800 440 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 PDGFRBP09619 1106 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 HNRNPA1P09651 372 aaKnown RBP eCLIP12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 PRKCSHP14314 528 aaPredicted RBP12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 ACAT1P24752 427 aaKnown RBP12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 MTHFRP42898 656 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 KCNQ1P51787 676 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 MYL5Q02045 173 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 NFKBIBQ15653 356 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 MAPRE1Q15691 268 aaKnown RBP12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 NFE2Q16621 373 aaPredicted RBP12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 ANO6Q4KMQ2 910 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 HSP90AA4PQ58FG1 418 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 SPOPLQ6IQ16 392 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 CYP26C1Q6V0L0 522 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 C11orf57Q6ZUT1 292 aaPredicted RBP12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 LIMS2Q7Z4I7 341 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 TCEAL8Q8IYN2 117 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 ANKRD20A12PQ8NF67 263 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 CMASQ8NFW8 434 aaPredicted RBP12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 KBTBD7Q8WVZ9 684 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 ELMO3Q96BJ8 720 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 NECTIN4Q96NY8 510 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 TMEM209Q96SK2 561 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 RTP3Q9BQQ7 232 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 MRPL45Q9BRJ2 306 aaKnown RBP12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 PRKD2Q9BZL6 878 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 NIF3L1Q9GZT8 377 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 SMYD3Q9H7B4 428 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 COQ4Q9Y3A0 265 aa12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 USP15Q9Y4E8 981 aaPredicted RBP12.92□□□□□ -0.34
CSNK1E-213ENST00000495232 BRWD1Q9NSI6 2320 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 C5orf42Q9H799 3197 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 MTMR11A4FU01 709 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 GRXCR2A6NFK2 248 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 SMTNL1A8MU46 457 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 KCNJ18B7U540 433 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 PMM2O15305 246 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 CDK11BP21127 795 aaKnown RBP12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 LMO2P25791 158 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 EEF1GP26641 437 aaKnown RBP12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 HOXA9P31269 272 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 RAP1GAPP47736 663 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 ALDH1A3P47895 512 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 TUFMP49411 452 aaKnown RBP12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 CDH8P55286 799 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 DUSP4Q13115 394 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 PLD1Q13393 1074 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 KCNJ12Q14500 433 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 CBX2Q14781 532 aaPredicted RBP12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 MAN2A1Q16706 1144 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 INTS6LQ5JSJ4 861 aaKnown RBP12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 TJAP1Q5JTD0 557 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 C4orf50Q6ZRC1 276 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 GPR149Q86SP6 731 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 OSTM1Q86WC4 334 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 TTC39CQ8N584 583 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 SPPL2BQ8TCT7 592 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 SMG7Q92540 1137 aaKnown RBP12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 SEMA4DQ92854 862 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 FAXDC2Q96IV6 333 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 TNIP3Q96KP6 325 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 SYT15Q9BQS2 421 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 TUBGCP2Q9BSJ2 902 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 S1PR5Q9H228 398 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 CYP3A43Q9HB55 503 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 SAMSN1Q9NSI8 373 aaKnown RBP12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 ABI2Q9NYB9 513 aaPredicted RBP12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 PCDHB5Q9Y5E4 795 aa12.91□□□□□ -0.34
CSNK1E-213ENST00000495232 BECN2A8MW95 431 aa12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 CCL16O15467 120 aa12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 SEC24AO95486 1093 aa12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 WEE2P0C1S8 567 aa12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 ASPAP45381 313 aa12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 EPHB3P54753 998 aa12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 PSMC1P62191 440 aaKnown RBP12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 YWHAEP62258 255 aaKnown RBP12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 CYP27A1Q02318 531 aa12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 LRMPQ12912 555 aa12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 SMAD2Q15796 467 aaKnown RBP12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 ZSCAN23Q3MJ62 389 aa12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 MGAT5BQ3V5L5 792 aa12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 TCP11X2Q5H9J9 407 aa12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 IQCEQ6IPM2 695 aa12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 UNC93AQ86WB7 457 aa12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 IRF2BP1Q8IU81 584 aa12.9□□□□□ -0.34
CSNK1E-213ENST00000495232 SPATA2LQ8IUW3 424 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms